MS002833 (gene) Bitter gourd (TR) v1

Overview


Name	MS002833
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function, DUF584
Location	scaffold359: 66222 .. 66962 (+)
RNA-Seq Expression	MS002833
Synteny	MS002833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTCAATGTTGGCTCCGCCGCCCGTTTCCGCCACCGCAAATCCTCATCCACCGAACGATTTCTCGGTTCCCTCTCATCTCCGGCCTCCCGCCATGGAAACCCTAGCTTCAGCTCCACCGCCGCCCCTGTCAACGGAGCCGACGATGAGAACGAGCTCAACGAGGACGACGTCTTCTGGACCGGCGATTTCGCTGCCGAATCCGGCCACCATACCCACTCCACTCCCTCCTCCTCTTCCTCTTCCACTCCTCGCCACCACATCCACCACCTTCAGCACAAGGGTTTCCCCCAGCCGGAGACCTTCGGAATCCTCGCCGCTCTCCCCGAAAACGAGGCCTCGTCCAGTCTCCGCAGCTCTTCCTATTTCTACCACAAGGCGTCCATTTCCTCCTCGTCGTCTTCTTCCTCCCCTTCGTCTTCCCGTATGATTCCCACCATTCCGAAACCTCCTCTGGAACGATTGCCCCTTCCGATTTCTGCCTCGTTGAAGTACCAGTCGGCCCCGGTGAATGTGCCGATAATGTCGAAGCCGGTTCAGAGACACCAGGAGTTGGACGTGGATGACATTGATGAAGGAGATGGTGAGATGTTGCCGCCGCACGAGATTGTGGCCAGAAGTTTGGCCCAATCGCCATTGTTGTCATGCTCAGTGCTCGAGGGCGCAGGAAGGACGTTAAAGGGCAGGGATCTCCGCCAGGTTCGCAACGCAGTTTGGAGACGAACAGGTTTTCTTGAT

mRNA sequence

ATGGACGTCAATGTTGGCTCCGCCGCCCGTTTCCGCCACCGCAAATCCTCATCCACCGAACGATTTCTCGGTTCCCTCTCATCTCCGGCCTCCCGCCATGGAAACCCTAGCTTCAGCTCCACCGCCGCCCCTGTCAACGGAGCCGACGATGAGAACGAGCTCAACGAGGACGACGTCTTCTGGACCGGCGATTTCGCTGCCGAATCCGGCCACCATACCCACTCCACTCCCTCCTCCTCTTCCTCTTCCACTCCTCGCCACCACATCCACCACCTTCAGCACAAGGGTTTCCCCCAGCCGGAGACCTTCGGAATCCTCGCCGCTCTCCCCGAAAACGAGGCCTCGTCCAGTCTCCGCAGCTCTTCCTATTTCTACCACAAGGCGTCCATTTCCTCCTCGTCGTCTTCTTCCTCCCCTTCGTCTTCCCGTATGATTCCCACCATTCCGAAACCTCCTCTGGAACGATTGCCCCTTCCGATTTCTGCCTCGTTGAAGTACCAGTCGGCCCCGGTGAATGTGCCGATAATGTCGAAGCCGGTTCAGAGACACCAGGAGTTGGACGTGGATGACATTGATGAAGGAGATGGTGAGATGTTGCCGCCGCACGAGATTGTGGCCAGAAGTTTGGCCCAATCGCCATTGTTGTCATGCTCAGTGCTCGAGGGCGCAGGAAGGACGTTAAAGGGCAGGGATCTCCGCCAGGTTCGCAACGCAGTTTGGAGACGAACAGGTTTTCTTGAT

Coding sequence (CDS)

ATGGACGTCAATGTTGGCTCCGCCGCCCGTTTCCGCCACCGCAAATCCTCATCCACCGAACGATTTCTCGGTTCCCTCTCATCTCCGGCCTCCCGCCATGGAAACCCTAGCTTCAGCTCCACCGCCGCCCCTGTCAACGGAGCCGACGATGAGAACGAGCTCAACGAGGACGACGTCTTCTGGACCGGCGATTTCGCTGCCGAATCCGGCCACCATACCCACTCCACTCCCTCCTCCTCTTCCTCTTCCACTCCTCGCCACCACATCCACCACCTTCAGCACAAGGGTTTCCCCCAGCCGGAGACCTTCGGAATCCTCGCCGCTCTCCCCGAAAACGAGGCCTCGTCCAGTCTCCGCAGCTCTTCCTATTTCTACCACAAGGCGTCCATTTCCTCCTCGTCGTCTTCTTCCTCCCCTTCGTCTTCCCGTATGATTCCCACCATTCCGAAACCTCCTCTGGAACGATTGCCCCTTCCGATTTCTGCCTCGTTGAAGTACCAGTCGGCCCCGGTGAATGTGCCGATAATGTCGAAGCCGGTTCAGAGACACCAGGAGTTGGACGTGGATGACATTGATGAAGGAGATGGTGAGATGTTGCCGCCGCACGAGATTGTGGCCAGAAGTTTGGCCCAATCGCCATTGTTGTCATGCTCAGTGCTCGAGGGCGCAGGAAGGACGTTAAAGGGCAGGGATCTCCGCCAGGTTCGCAACGCAGTTTGGAGACGAACAGGTTTTCTTGAT

Protein sequence

MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRSSSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPVQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD

Homology

[Close]

BLAST of MS002833 vs. NCBI nr
Match: XP_022142671.1 (homeobox protein vnd-like [Momordica charantia])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60
           MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF
Sbjct: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60

Query: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS 120
           WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS
Sbjct: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS 120

Query: 121 SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV 180
           SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV
Sbjct: 121 SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV 180

Query: 181 QRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240
           QRHQELDVDDIDEGDGEMLPPHE VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW
Sbjct: 181 QRHQELDVDDIDEGDGEMLPPHEXVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240

Query: 241 RRTGFLD 248
           RRTGFLD
Sbjct: 241 RRTGFLD 247

[Close]

BLAST of MS002833 vs. NCBI nr
Match: XP_038894579.1 (uncharacterized protein LOC120083099 [Benincasa hispida])

HSP 1 Score: 377.9 bits (969), Expect = 6.8e-101
Identity = 208/249 (83.53%), Postives = 220/249 (88.35%), Query Frame = 0


Query: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60
           MD+N+ S  RFRHRKS S+ERFL S  SP  R  NPS        NG DD+ ELNEDDVF
Sbjct: 1   MDLNLPS-FRFRHRKSPSSERFLASFHSPPVRTANPS------STNGVDDDTELNEDDVF 60

Query: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLR 120
           WTGDFAA+S HH+HSTPSSSSSSTPRHHIHHLQ HKGFP PETFGILAALPENEASSSLR
Sbjct: 61  WTGDFAADSAHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLR 120

Query: 121 SSSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKP 180
           +SS+FYHKAS+ SSSSSSSPSSSRMIPTIPKPPLERLPLPIS+SLKYQSAPVNVPIMSK 
Sbjct: 121 NSSHFYHKASV-SSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPIMSKA 180

Query: 181 -VQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA 240
            VQR QE+DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA
Sbjct: 181 VVQRQQEIDVDDVDEDDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA 240

Query: 241 VWRRTGFLD 248
           VWRRTGFLD
Sbjct: 241 VWRRTGFLD 241

[Close]

BLAST of MS002833 vs. NCBI nr
Match: XP_022945942.1 (uncharacterized protein LOC111450033 [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 204/242 (84.30%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 8   AARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAA 67
           ++RFRHRKS S+ERFL S SSP+ R  NP   ++A  ++  D+ +ELNEDDVFWTGDFAA
Sbjct: 7   SSRFRHRKSPSSERFLLSFSSPSPRPSNP---TSANALDNDDNNSELNEDDVFWTGDFAA 66

Query: 68  ESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLRSSSYFYH 127
           +S HHTHSTPSSSSSSTPRHHIHHLQ HKGFPQ ETFGILAALPENEASSSLR+SSYFYH
Sbjct: 67  DSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSYFYH 126

Query: 128 KASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK-PVQRHQE 187
           KAS+ SSSSSSSPSSSRMIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK  VQRHQE
Sbjct: 127 KASV-SSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRHQE 186

Query: 188 LDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 247
           +DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF
Sbjct: 187 IDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 244

[Close]

BLAST of MS002833 vs. NCBI nr
Match: XP_023522766.1 (uncharacterized protein LOC111786770 [Cucurbita pepo subsp. pepo] >XP_023542094.1 uncharacterized protein LOC111802081 [Cucurbita pepo subsp. pepo] >XP_023542448.1 uncharacterized protein LOC111802350 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.2 bits (957), Expect = 1.7e-99
Identity = 204/242 (84.30%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 8   AARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAA 67
           ++RFRHRKS S+ERFL S SSP+ R  NP    T+A     D+ +ELNEDDVFWTGDFAA
Sbjct: 6   SSRFRHRKSPSSERFLLSFSSPSPRPSNP----TSANALDDDNNSELNEDDVFWTGDFAA 65

Query: 68  ESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLRSSSYFYH 127
           +S HHTHSTPSSSSSSTPRHHIHHLQ HK FPQ ETFGILAALPENEASSSLR+SSYFYH
Sbjct: 66  DSTHHTHSTPSSSSSSTPRHHIHHLQHHKAFPQSETFGILAALPENEASSSLRNSSYFYH 125

Query: 128 KASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK-PVQRHQE 187
           KAS+ SSSSSSSPSSSRMIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK  VQRHQE
Sbjct: 126 KASV-SSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRHQE 185

Query: 188 LDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 247
           +DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF
Sbjct: 186 IDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 242

[Close]

BLAST of MS002833 vs. NCBI nr
Match: XP_022967102.1 (uncharacterized protein LOC111466606 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 2.4e-98
Identity = 202/242 (83.47%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 8   AARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAA 67
           ++RFRHRKS  +ERFL S SSP+ R  NP    T+A     D+ +ELNEDDVFWTGDFAA
Sbjct: 7   SSRFRHRKSPPSERFLLSFSSPSPRPSNP----TSANALDDDNNSELNEDDVFWTGDFAA 66

Query: 68  ESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLRSSSYFYH 127
           +S HHTHSTPSSSSSSTPRHHIHHLQ HKGFPQ ETFGILAALPENEASSSLR+SS+FYH
Sbjct: 67  DSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHFYH 126

Query: 128 KASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK-PVQRHQE 187
           KAS+ SSSSSSSPSSSRMIPTIPKPPLERLPL IS+SLKYQSAPVNVP+MSK  VQRHQE
Sbjct: 127 KASV-SSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQE 186

Query: 188 LDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 247
           +DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF
Sbjct: 187 IDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 243

[Close]

BLAST of MS002833 vs. ExPASy TrEMBL
Match: A0A6J1CMW3 (homeobox protein vnd-like OS=Momordica charantia OX=3673 GN=LOC111012725 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.6e-130
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60
           MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF
Sbjct: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60

Query: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS 120
           WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS
Sbjct: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQHKGFPQPETFGILAALPENEASSSLRS 120

Query: 121 SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV 180
           SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV
Sbjct: 121 SSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKPV 180

Query: 181 QRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240
           QRHQELDVDDIDEGDGEMLPPHE VARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW
Sbjct: 181 QRHQELDVDDIDEGDGEMLPPHEXVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 240

Query: 241 RRTGFLD 248
           RRTGFLD
Sbjct: 241 RRTGFLD 247

[Close]

BLAST of MS002833 vs. ExPASy TrEMBL
Match: A0A6J1G2B0 (uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC111450033 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.4e-101
Identity = 204/242 (84.30%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 8   AARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAA 67
           ++RFRHRKS S+ERFL S SSP+ R  NP   ++A  ++  D+ +ELNEDDVFWTGDFAA
Sbjct: 7   SSRFRHRKSPSSERFLLSFSSPSPRPSNP---TSANALDNDDNNSELNEDDVFWTGDFAA 66

Query: 68  ESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLRSSSYFYH 127
           +S HHTHSTPSSSSSSTPRHHIHHLQ HKGFPQ ETFGILAALPENEASSSLR+SSYFYH
Sbjct: 67  DSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSYFYH 126

Query: 128 KASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK-PVQRHQE 187
           KAS+ SSSSSSSPSSSRMIPTIPKPPLERLPLPIS+SLKYQSAPVNVP+MSK  VQRHQE
Sbjct: 127 KASV-SSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRHQE 186

Query: 188 LDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 247
           +DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF
Sbjct: 187 IDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 244

[Close]

BLAST of MS002833 vs. ExPASy TrEMBL
Match: A0A6J1HPU4 (uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 202/242 (83.47%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 8   AARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVFWTGDFAA 67
           ++RFRHRKS  +ERFL S SSP+ R  NP    T+A     D+ +ELNEDDVFWTGDFAA
Sbjct: 7   SSRFRHRKSPPSERFLLSFSSPSPRPSNP----TSANALDDDNNSELNEDDVFWTGDFAA 66

Query: 68  ESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLRSSSYFYH 127
           +S HHTHSTPSSSSSSTPRHHIHHLQ HKGFPQ ETFGILAALPENEASSSLR+SS+FYH
Sbjct: 67  DSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHFYH 126

Query: 128 KASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK-PVQRHQE 187
           KAS+ SSSSSSSPSSSRMIPTIPKPPLERLPL IS+SLKYQSAPVNVP+MSK  VQRHQE
Sbjct: 127 KASV-SSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQE 186

Query: 188 LDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 247
           +DVDD+DE DGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF
Sbjct: 187 IDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 243

[Close]

BLAST of MS002833 vs. ExPASy TrEMBL
Match: A0A0A0LT40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.6e-98
Identity = 204/249 (81.93%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60
           MD+N+ S +RFRHR S S+ERFL S  SP  R  NPS S+TA      DD++ELNEDDVF
Sbjct: 1   MDLNLPS-SRFRHRNSPSSERFLASFPSPPVRSSNPS-STTA-----LDDDSELNEDDVF 60

Query: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLR 120
           WTGDFA++S HH+HSTPSSSSSSTPRHHIHHLQ HKGFP PETFGILAALPENEASSSLR
Sbjct: 61  WTGDFASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLR 120

Query: 121 SSSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKP 180
           +SS+FYHKAS+ SSSSSSSPSSSRMIPTIPKPPL+RLPLPIS SLKYQSAPVNVPIMSK 
Sbjct: 121 NSSHFYHKASV-SSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKA 180

Query: 181 -VQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA 240
            VQR  E+DVDD+DE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNA
Sbjct: 181 VVQRQLEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNA 240

Query: 241 VWRRTGFLD 248
           VWRRTGFLD
Sbjct: 241 VWRRTGFLD 241

[Close]

BLAST of MS002833 vs. ExPASy TrEMBL
Match: A0A1S4E4F1 (uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.1e-96
Identity = 203/249 (81.53%), Postives = 220/249 (88.35%), Query Frame = 0


Query: 1   MDVNVGSAARFRHRKSSSTERFLGSLSSPASRHGNPSFSSTAAPVNGADDENELNEDDVF 60
           MD+N+ S +RFRHR S S+ERFL S  SP  R  NPS S+TA      DD++ELNEDDVF
Sbjct: 1   MDLNLHS-SRFRHRNSPSSERFLASFPSPPVRTSNPS-STTA-----LDDDSELNEDDVF 60

Query: 61  WTGDFAAESGHHTHSTPSSSSSSTPRHHIHHLQ-HKGFPQPETFGILAALPENEASSSLR 120
           WTGDFA++S HH+HSTPSSSSSSTPRHHIHHLQ HKGFP PETFGILAALPENEASSSLR
Sbjct: 61  WTGDFASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLR 120

Query: 121 SSSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSKP 180
           +SS+FYHKAS+ SSSSSSSPSSSRMIPTIPKPPL+RLPLPIS SLKYQSAPVNVPIMSK 
Sbjct: 121 NSSHFYHKASV-SSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKA 180

Query: 181 -VQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA 240
            VQR  E+DVD +DE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNA
Sbjct: 181 VVQRQLEVDVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNA 240

Query: 241 VWRRTGFLD 248
           VWRRTGFLD
Sbjct: 241 VWRRTGFLD 241

[Close]

BLAST of MS002833 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 154.8 bits (390), Expect = 8.8e-38
Identity = 124/238 (52.10%), Postives = 146/238 (61.34%), Query Frame = 0


Query: 38  FSSTAAPVNGADD-ENELNEDDVFWTGDFAAESGHHTHSTPSS-SSSSTPRHHIHHLQHK 97
           FSS ++    +D  + ELNEDD+F   D +       HS  SS +   TP   +      
Sbjct: 9   FSSPSSLATISDSADGELNEDDIF-AIDISHAPPQARHSPVSSPAKQQTPARQLQR-SKS 68

Query: 98  GFPQPETFGILAALPENEASSSLRSSSYFYHK---------ASISSSSSSS-------SP 157
           G    E  GILAALPE+  SSS   S  F+HK         +S +SSSSSS       S 
Sbjct: 69  GLKNVEASGILAALPESSGSSSY-LSHVFHHKPAAALSTSVSSTASSSSSSGGGASAGSS 128

Query: 158 SSSRMIPTIPKPPLERLPLPIS--ASLKY-QSAPVNVPIMSKP-VQRHQE----LDV--D 217
           SS+R IPT PKPP ERLP   S     KY QSAPV VP++S   + RH++     DV  D
Sbjct: 129 SSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDVVDD 188

Query: 218 DIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD 248
           D +E +GEMLPPHEIVARSLAQS LLSCSVLEGAGRTLKGRDLRQVRNAV+RRTGF+D
Sbjct: 189 DEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

[Close]

BLAST of MS002833 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14
Identity = 69/184 (37.50%), Postives = 89/184 (48.37%), Query Frame = 0


Query: 79  SSSSSTPRHHIHHLQHKGFPQPETF---GILAALPENEASSSLRS--SSYFYHKASISSS 138
           S  S    H+   +   G    E F    + + L E E SS       S+F      SSS
Sbjct: 3   SLGSRRRTHNSRRVPSMGIEGDEEFQEEDVWSVLREGETSSPEMKIPKSHF-----SSSS 62

Query: 139 SSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAPVNVPIMSK----------PVQRH 198
           SSSSSP + R    +             + +K  SAP+NVP  SK              H
Sbjct: 63  SSSSSPWNIRRSKEV-------------SGVKQSSAPMNVPDWSKVYGDSKSNRRSSHLH 122

Query: 199 QELDVDDIDEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 248
                DD ++ DG M+PPHE VAR LA++ + S S+ EG GRTLKGRDL +VRNAV  +T
Sbjct: 123 SHAADDDDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKT 168

[Close]

BLAST of MS002833 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 75.9 bits (185), Expect = 5.2e-14
Identity = 57/143 (39.86%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 111 ENEASSSLRSSSYFYHKASISSSSSSSSPSSSRMIPTIPKPPLERLPLPISASLKYQSAP 170
           E E  S LR S     +  +S S++  S SSS     IPK         +S   K  SAP
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGN------EVSGGAKQSSAP 68

Query: 171 VNVPIMSKPVQRHQELDVDDI------DEGDGEMLPPHEIVARSLAQSPLLSCSVLEGAG 230
           +N+P  SK     ++     +      D+ +G M+PPHE+VA+ LA++ + S S+ EG G
Sbjct: 69  MNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEGSMVPPHELVAKRLARTQISSFSMCEGIG 128

Query: 231 RTLKGRDLRQVRNAVWRRTGFLD 248
           RTLKGRDL + RNAV  RTGFL+
Sbjct: 129 RTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of MS002833 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 168 SAPVNVPIMSK-----PVQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLL----SCS 227
           SAPVNVP  SK      V+   ELD +D ++ +  M+PPHE +A+S A+          S
Sbjct: 115 SAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIGGGGAS 174

Query: 228 VLEGAGRTLKGRDLRQVRNAVWRRTGF 246
           V +G GRTLKGR+LR+VR+A+W +TGF
Sbjct: 175 VFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of MS002833 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-12
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 168 SAPVNVPIMSK-----PVQRHQELDVDDIDEGDGEMLPPHEIVARSLAQSPLLS---CSV 227
           SAPVNVP  SK      V+   E D ++ +E  G M+PPHE +A+S  +    S    SV
Sbjct: 115 SAPVNVPDWSKIYRVNSVESIHESDEEE-EEDSGMMMPPHEYLAKSQQRRSRKSGGGGSV 174

Query: 228 LEGAGRTLKGRDLRQVRNAVWRRTGF 246
            EG GRTLKGR+LR+VR+A+W +TGF
Sbjct: 175 FEGVGRTLKGRELRRVRDAIWSQTGF 199

The following BLAST results are available for this feature:

BLAST of MS002833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142671.1	1.6e-129	99.60	homeobox protein vnd-like [Momordica charantia]	[more]
XP_038894579.1	6.8e-101	83.53	uncharacterized protein LOC120083099 [Benincasa hispida]	[more]
XP_022945942.1	1.5e-100	84.30	uncharacterized protein LOC111450033 [Cucurbita moschata]	[more]
XP_023522766.1	1.7e-99	84.30	uncharacterized protein LOC111786770 [Cucurbita pepo subsp. pepo] >XP_023542094....	[more]
XP_022967102.1	2.4e-98	83.47	uncharacterized protein LOC111466606 [Cucurbita maxima]	[more]

BLAST of MS002833 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMW3	7.6e-130	99.60	homeobox protein vnd-like OS=Momordica charantia OX=3673 GN=LOC111012725 PE=4 SV...	[more]
A0A6J1G2B0	7.4e-101	84.30	uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1HPU4	1.2e-98	83.47	uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606...	[more]
A0A0A0LT40	7.6e-98	81.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1	[more]
A0A1S4E4F1	1.1e-96	81.53	uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=...	[more]

BLAST of MS002833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15040.1	8.8e-38	52.10	Protein of unknown function, DUF584	[more]
AT4G04630.1	2.3e-14	37.50	Protein of unknown function, DUF584	[more]
AT4G21970.1	5.2e-14	39.86	Protein of unknown function, DUF584	[more]
AT1G61930.1	2.6e-13	47.13	Protein of unknown function, DUF584	[more]
AT1G11700.1	3.7e-12	48.84	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 53..247 e-value: 2.4E-43 score: 148.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 7..247
None	No IPR available	PANTHER	PTHR33083:SF50	SUBFAMILY NOT NAMED	coord: 7..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002833.1	MS002833.1	mRNA