MS002636 (gene) Bitter gourd (TR) v1

Overview


Name	MS002636
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DExH-box ATP-dependent RNA helicase DExH6 isoform X1
Location	scaffold111: 354466 .. 364202 (+)
RNA-Seq Expression	MS002636
Synteny	MS002636

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCATGCAGTTTTCACTTTTGAAGCTGATCTTTCGAAGCGTGAACGCGCTCTAGTGCATGAAGTGTGCAGGAAAATGGGTATGGCATCAAAGAGTTATGGGTAAGTGTCAGTTAGCAATTTCTCTTGAGTTTAGAACGCATCTAGTCATATATAGGTAACTTCATATTCTTGGAAGGAAAAAACTCCCGAGTTTAGGAGGCATATAGTCACATATTTATAACTTAATATTCTTCAAAGGAAAATTCTTCTGTGCATCTACAAGTTCTCAGGCGTCTGGAATATTTTGCTTTAGGTTTCTCATTTGATAAATCTTTTTGTAGGCATGGAGACCAACGTCGTGTTTCCGTATATAAATCCAAACTGCAAATGGAAACCATGAAATTTTCTGAAAAGACAAAAAGTGTTTTGGACGATTTATTTAGTAGATATCCTCCTGATGATGGAGAATTGGGTACAACTGGAGAGCAGAATAAAAAGGCTGATAAACAAAGGCGAAAGAAAGATGATATTTTCTTCAGGCCCTCAATGAACAAGGAAGAGATAATGAAGAAAGTGGAATCATATGCTGCTAGAGTCGAGAGTGTTGCGAATCTGAAAAAGGTTTCTTTGAGTAAATGAACAAAAGTGATGAAGTTTACTGGTTTTATGCTGTACCTTCATCTCTCTCTCTTTTAGTTCTTCTTATAAAGGAAATGCGTCTTCATTTCATATGTTAATGCCGTAACTTCATTTAACACCCCCCCCCCCCGGGGAAATAGCTGAAAGTGAATTATTGGGACTTTTCTTCTTGTAGATCTCAGAAGAAAGATCCAAGCTTCCAATTGCATCCTTTCAAGACGTCATTACATCAACAGTTGAATCTCACCAGGTTGCTTTTAATATGCATTTCTCCTGCCCAGCATTCAAATTTACATTACATATCACGTTACTACTGCCAAAAAAATTCCATTGTTAAGAATTTTTCAGGTGTTTCTTTGGAAGTTATTGTTGGTTGGTCTTCTAGCTTCTCATATCAACTGGTGTGAACTGTTTGATCTTTGCTTTAAGCAGGTGGTTCTCATATCTGGTGAGACTGGATGTGGAAAGACAACACAGGTAACTCATTCTGTCTCTATAGTGATTGCAATTGTTTTCTTTTCCTTCTCGAATTCATCATTGCTTGCCAAAAGCTCTATTCTGGTTGCAATGATTTCTTTTTCCTAATAGGTATATTCACCCCTAAGGGTCTGTCTGTCTTTGGCCTGTATATGAATTGCACGGTGTTTGGCCTTTTAGGGTCTGTCTGTCTCTGGTGACATTATAAGAAAAATAACTTTTATTGATGTAAGAAAAAGATATGAAGTTTGGACGAGATATCCATCCCCTACTCTACAAATATTGAGGTTCTCATTCATAGTCCTAGGGTGTAGTATCCATTTGTTCTATAGTAAAATCCAGTCCTTAGTAAATTAGCAGCTGGCACATAAATTATCCTGCTTATTTTGCTTTGCATTTTGAATGTGAATAGTGAGAGAAAAATTATGACAACCATCATAGTGCTGTTTTTCTTTAAGCTCGATTATCTTTCATGTTCGGATATGGAGTATTTCATTAAGATCTATTGGTTTGTCTTTTTATGTGTTTGCAATGTTGGGGTGAGAGGAGTACCCTTTTTCTGTAAATTCTTTAACAATAAAATTTAAACAAATTGCTCAGGATTAAGTTCTTATTGTTGCATTATATATATTCTATATAATTCCTGGTAATATGGTGTAGGTCCCCCAGTTTCTCATGGATTATATGTGGGGTAAGGGAGAGGCATGTAAGATAGTCTGTACTCAACCTCGGCGAATATCTGCTACATCAGGTTTGCTCCACTTATTGCCTTTCCTGGGGCCTCTTTTGTTTTTAAAATTAATTTTTTACATTTAGTTTCGATTATTTGTCATTCTTACTTCCATTTCTTTGAATTTGTTGTCTTCTTCCGTTTTAGTTTCTGAGCGGATCTCCCATGAAAGAGGAGAAAATGTTGGAACTGATGTTGGATACAAGGTATTCTTTTTGCTGGTGGTTTACACAAAATACATCTAATTAGCCATCTAGTAGAGAATAATACATCTAATTGCCATCTAGTAGAAAATTTTATTCTCCTTTGGGGTTCCAATGGGAGGCTTGGTTGTTATCATTATCTTGAAGTAGCTGATTTTGGGAAAATGTTTCTTATGATGGAAATATGATAGGACCTTATCATTACAATTGGAATAGATAGCAGTTATTCCTCATCAGTAATAGGCACTTTTGGAAAATTTTACTTTTATATATTATCTTGGTTATTTTTGCTTTCATAGATATTAATATTAGCTGACATTCTCTTTTTCATAATGGAAGATTCGATTGGAAAGTAAAGGTGGGAGGCACTCGTCAATTGTACTCTGCACAAATGGTATCCTTTTAAGAGTGTTGATTTCTGAAGGTTTGGGCAAATTAACTACGGAAGCTCCAGAAAAAAGTAGGAAAAATGTTGTGTCTGACTTAACTCACATTATTGTGGTATGTATTCTATTTGTTGCTTTTGAATTTGTCATTTTTTTTTTCATGTTTCGTTTGTTGCTTTGAATTTGTAGGATTTACAGCTAGATGTTTTGGTGTATCTCGAGAATACTCTTATTTTCGTTTCTAACAAAATATTCCACATCATGCTACAGAAGGAATAAAAGAAAAAAAAAATTAACTTTCTTTTATCTTGAGGAGGATACAAAAGAACCTCCTCTGATATAGTCTCTGATGCTAGTTAATGTTGCAATATTTCTTGTTCCATCCTTGAATTATGAACACAAGTCTCTTTTGGCCTTTAAGTTGTTATTGGTGTTCTTATTTGTACATTTGTAGGATGAGGTTCATGAAAGGGATCGCTATTCTGACTTCATTTTAGCAATTTTGAGGTATATTTTACTTCCGTTGATCCCCTCGTATGACTGAGCTATTTATCACTTGTCTTCTTTTCCCCATAAACTACAAAACTCCGTTGATTCTCTCATATAAATGAGCTATTTATCACTTGTATTTTTTCCCATAGAGAATAAAACTCTTGTATGTTATTTCGAGAAACAAACTTTCTGTAAGCAATGGGCAAAAAATAAGTAATATCTCGCCCTTACCAGAGAACATTACAAAAGATTTTCCAATTGGTATGCCATTTAAATGCTTTGATAAGAAACTCCTTCTAGAAGCTAAAAATAAATTAAAAATATAAAAATAGTCTTTAGTTTCTTCTAAGTTCTTGTTTGGATGCTAAAAAGATTTATTTTCCGCATACCAAATTATCCATACTGAAGCACAAGAAAGCTTGGCCCACAAAATTTATTGCTTCTATCATTAGCTAGGAAGTTCAAACACTGCTTTTAGATCCAGGTCCTCACATGTCTGTATAGACTATGAATAGTGACTCTGAATGCGATATCAAGTATTAACCATCATTGTCTACAGAAAACACTTTCATGACAATTGGTTTAAGATCATGAGGTCTCTTCAAGAACACATTAGTGACTTCTGCACTTCCTTTCTCGGCTGACAGAGCCCTTCTTAGATGTGAGGGAGTGGAACTAGCACAAACCCTTAATAAAGTGAACGATTGGTACCAAGTAGGACACTTCCTGTCCAGCTGAAATTTGAGCCTTGGATCAGAGAGCATTACAGTGCAAATTCTGTTGTTCCCTTGGTATGGTGGTTGGATAAAGAAAATGAAGGGAAAAGTTTGGTTTGTTGGGATAAAGTCAGTAGGCCTTTGGAGGAAGGGTGTCTTGGCATTTGCAACATCAAAACCAAGAACAAAGCCCTTCTTGCCAAATGGATTTGGCGTTATTTAGTGGAGGAACATGCTCTTTGGCGGAAGGTAATTGATGCTAAATACGGGCCCATTGATTGCCATCACCAACAAAATACTTTATGTACAGCAAGAGCCTTTGGTCCATAGAAGGAAATACCGAAGCTTCAAACATTGATTTTAGACAGAATTTCCATCAAAGTGGGTGATGATAAATCCACAGCTTTTTCGAAGGATGCTTGTTTGACAAAGGATATCCTCTGCAGCCAGCACACATCTCCTCTTATTTGCATTGGCTGCTGACCAGTTGATTTCAGTAGAAAAAATGTGGGATGAACAGATGACTGCATGGGATCTTAGGTTTATTAGAAACCTCAAAGAATCTGAAATTGCTGAATTAGTATACCTCCTTCAATTACAGAACAGTAAACAACCCACCGCACACAAAGATAGCTTCATATGAAACATGGAATCATCGGGACTCTTCACAACCAGCTCATTGACCCGTGATTTATCTTCTGCCTTGCCGAATGAAACATCCCCCTCCCTATACAAGACTATTTGGAGTGATCATTACCCTAAAAAGATTAAGTTCTTTCTTTGGGAGGTTAGTTTAAATGCCAGAAACACCAAAGGAGAATGCCATATATGCAAATCTCCCCTCATTGGTGCATTCTCTGTAGAGAAAAGGGAGAGTCACAGGGCCACTTATTTACATGTGCACCATATGAAATTTTGGAACAAAATCCTCTCATTTTTTGGATGGTACACTCCTCTGTCCTATGAAGCAAACAGTGCACTGGCCTTCTTTCTCATGGGCCACCCTTTCACAAAGGAGAAAAGGCTTCTATGGATGCACTTTGTCCGAGCGGGATTTTGGGCTTTTTGGATGGAAAGAAATCATCGGATTTTCCAAGGAAAGGAACCCCCCTTTGATCATGTTTTTGAATCCATTGTTTATTTGGTCGTCTCATGGTGTAAATGTTCTCCATCTTTCCATCATTATAGTTTTACTGAATTGATTTCCAATTGGAGATGTTTTTGTAACTCCCTTGGATAGGGTTTTTCCCCTTTTGATCTCCCTTCTGTATCTCTTCTAATTTCATATATCAATGAAATTTTTTCTCATTAAAAAAAAAAGTTAAAAAACAAAGCACTGTGGAATTGTATGGTGAGAACTATTTTATGGACTGTGTGGAAAGAAAGAATAAAATGGGTTTTTGAAGACTCCTTTGCTGTGTAGGTTTTTTTTGTGGAATAGTGTACAACATAGAGCTTCTTAGTGGTGTTCAAATCACAATCACTTATTTTGTAGTTACAACCTCCTCATGATTTTGTACGATTGAAATGCCTTACTCTAGTTCCTTTTGGTGGTGACCTCCACCCCAGCCCTTTGGTTGTCTCTGTTCCTTTTTTGAATGTATTAGCTCTCTGTTTCTCTCAAAAAAATGTTTGTGTTTCTTTCACCTTTTAAGTCCCCTATTTTGAGCTTGCTTATTTTATTAAAAAATTTGGATATTTTTCTTCAATTCTTTTGCTACTTGTTTGCAGGGACTTGCTTCCGTCATATCCTCGGTTACGGCTGGTTAGTTCAATTCTTCTTGTCTTTTACTTGAGACATTTTTGTGCTCTTCAACTATTCATACTTCTATTAATAATAGATAATAGATTTTATAGAGAAGAAATACTTGTAATTGTAGAAAACAATAAAATAGAAGATTCTTGGAAGCTTGTTTTTTTTTTTATTATGACTGAGATGCATGCTTCTATTGTTCTATATCCTGACAGATAATAATGAGTGCTACTATTGATGCTGGACGGTTTTCACAATATTTTGGTGGCTGTCCAATGATCAATGTTCCTGGATTCACCTTTCCTGTAAACGTCCCACTTTACTCTTTGTAGTTTTGGATTGGTATGTAGTCTTGGGTGATATTCTAACATTTAATATTCAGGTAAAAAATTTATATCTGGAGGATATACTTTCTGTAGTGAAATCTTCGGAAGAGAACCACCTTGATGAAAATATGGTGGGTGCTTCAGATGAGGACCCTGAGCTAACCGAAGAAGACAAGTTCGCTTTGGATGAAGCAATTCACTTGGCTTGGTTGAACGAAGAATTTGACGCCCTTCTAGAATTGGTGGAGGATGGATCCTCTCAACTCCTCAATTATCAGCATTCCGTGACTGGACTAACACCTCTAATGGTGTTTGCTGGAAAGGGTAGAGTTTCCAATGTTTGTATGCTGCTATCTTTTGGTGCCATGTGTGAATTACGGGCCAAGGACGGTATGACTGCATTGGAGTTAGCTAAACTAGGAGATCAGAAAGAAACTGCTGAAGCAATCAGAAAACATTTGGAAAGTTCCACGTCTATCTCCAAGGAAGAACAACGGTTGATTGGTAAATATCTTGCAAAAAATTCTAATTCTGTTGATGTTGCTCTTATAGAGCAGTTGATAGGGAAAATATGTCTTGATTCGAAAGAAGGAGCTATCCTTGTTTTCCTTCCTGGGTGGGATGATATCAGCAAGACTCGAGAAAGGCTGTCTATCAATCCTCTTTTCAAAGATGCATCAAAATTTTTGATAATATGTCTTCATTCAATGGTTCCCTCTAAAGAGCAAAAGAAGGTTTTCAGACGTCCACCTCCTGGCTGCCGCAAAATTATTCTCTCTACTAATATTGCTGAAACGGCCATTACCATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAATGTTTCCACTTTTCAATCTTCTTGGATCTCAAAGGCTAGTGCCAAGCAGCGAGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCATCTTTATTCGAAATTTCGTGCATCTTCTCTTCCTGATTTCCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAGCTTTGTCTGCAGGTGCACTTTTCAGCCTAATTCTTTATTATCTCGTAGTAAGATTTACTGAGATCACATAATCATTCTATCTAAAACATGATTGTATATTCAACTGTTCATTGGTTTGTTATTCTGATACATGATTGACCAAGCTGAATGTGACTGAGGAGTGGTGAAGAGAGTGGCGGTGGTTATGGTGATAAAAAAACTGAGGAAACCCAAAAAATTATGAGAAGAGTAAATTCTGTAACAAACTATCATATACCTTTGGAATTGTCATGCTAATGTATGTATGTATTAGGTAGACTGGTAAGTAGTATGGTGGTCTGTACATAGAGTTGGAGACTTCATTTTATACTTTTTGGAGTGTGTTTTTATTCCTACATGTCTTCTGTAATATTATTTGTCCGTGTTATCCCTGATAAATGATTAGGCAAGAATATTCTTATGCATTTTTAGTACAACAAATGTAGGGCCGGTGATTTGAACCTTCGACCTCTAGGAAAGAGGTAGGAAATATCTTAACCCAGCTAGGCTAATGTTAGCAAGAATATTCTATTTATATAGCTACTTTTGTCTGTTTTTCAATTTCCCAAAATATATCAAACTTATGATGTGTATAAATGTAATGTGAATGACATGTTATCACTTTTGTATCGCTTCTTTTCAAATAATATACATTAACATATTAGGTATACGCAGAGCAAAATTTTAGGATGTGATAATGTTTTAGATGATAATGATATTCTTATTTGGGTTGGATTCTCTCGAAATGAGCACAATGATATTATTAAAATTTTGAACTAACTTAATATATCTTCACATTCTCATGATACAAATATCCATGCAAATTGACGCCAACATTTCATTTACTAGCAAGAAATTAGCCAAAAGATAATCATATTCCATCCATTGTATGATACGTTTGGAATAATATTGGATCTATCGGTGTATCTTCTACACTAATCAATCTTGGTCTGCATGCAAATTGGTTCAAGAGTGATAAGTATTGTTTGCAGATTTAAATCTCAATAATGTGGTTTATTGAAATATTAGGATCCCCCTTGTTATTCCTAATTGTCGTAGGATCCCTTTAATCCTTTTTCATACCAATATTATTTGGCAGGTGAAATTGCTTGATCCAAATTGTAGGATAGAGGTTTTCTTGCAGAAGACTTTGGACCCTCCAGTTTTTGATACCATCCGTAATGCAATCTTACTCCTTCAGGAAATTGGGGCTTTGTCACTTGATGAGAAACTGACTGAGCTTGGGGAGAAATTAGGTTCATTGCCTGTTCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGACCCTGCTCTAACTCTGGCATGTGCTTCTGACTACAGGGACCCCTTCACTCTTCCCATGTCACCGAGTGAAAGAAAGAAAGCCGCTGCTGCTAAAGCGGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAATTGGCTATTGTAGCTGCATTTGATTGCTGGAAGAATGCTAAAGAAAGGGGTCAAGAGGCCCGTTTCTGTTCTAATTACTATGTCTCTCCAAGCACTATGTCTATGCTGTGTGGCATGCGGAGACAACTCGAAATGGAACTAGTTAAAAATGGTTTTATACCTGAGGGTGTGAAAACTTGCAGCTTAAATGCTTGTGACCCTGGCATTCTCCATGCTGTCCTTGTGGCTGGGTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAACGGGCTGTTGTAGAAATCAGTTCAGGGGGTAGAGTTCTTTTGCACCCAGGGTCCCTTAACTTTGAGCTGTCACTCCGTCAAACGGATAGTAGACCTCTGATTGTTTATGATGAGATAACTCGCGGGGACGGCGGTACACACATAAGAAACTGTACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGAGATTGCTGTTGCCCCTGTTAAGGAGAATGATAACGGTAAAGACAATATTAAAAATGATGATGATGGAAATGGTGGAGCTGACGATAAAATGGATGTAGATAATAAATCAAATGAACAACCAGAAGAAATGATTATGTCCTCCCCTGATAATTCAGTAACTGTGGTTGTTGACCGTTGGTTGTATTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTGCAGCAATCCTATTCAAAGTAAGTGGTGATAGACTTGTATAATACATTCTTGCTCGCACTTTTTGTATAATTATGACAGACTTTTTGTTGTGTTTCAGGTAAAACATCCTAATAAAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTAACTGGTATTCCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAGATCAGCAATTTTGTACCTGGGAGGTCTGTAGGAACGCACAAGACAGTAAGTTGGTTTCTTAGATCACTTTCAAGTTATACTGATTTTACTGTTCCTGAAGTGAATGGAACACTTTTGAATGATCCGTTAAGTCAGAATTTTTTACCACTGCCTGATTCTAGAACAGCAAACCCGAGTGGCCCATTGAGCCCTAATTTTAGGGCTTCACCTAATTCAGTCTATGCAAGGTCAGCACTGCAGCCCCATAGAAAGCAGAAGCAGCCTCCCCATCCCCATCGAGAGCAGAAGCAGCCTCCGCAGGCAGTCAAACCCTCTCAACACCAAAATGCCACCCAACAGAAGCAGCCTCCCCAGCCAGTCAAACCCTCTCATGACCAAAATGCCACCCACCAGCAGCAGCAGCAGCACGCTCAAGAGCGCACTCCACGTAAACAGAGAAAGTCCCACAAGAAGAAGCCCCCATCAGGAGACCTCAGTTTAAATGGGTATGGATTAAGCATGTATGGACCATACGGTCCTCGGGGCGTTTCTTTAAAGCGGCCACGCAGTAACGGGGTGGGA

mRNA sequence

ATGTTTCATGCAGTTTTCACTTTTGAAGCTGATCTTTCGAAGCGTGAACGCGCTCTAGTGCATGAAGTGTGCAGGAAAATGGGTATGGCATCAAAGAGTTATGGGCATGGAGACCAACGTCGTGTTTCCGTATATAAATCCAAACTGCAAATGGAAACCATGAAATTTTCTGAAAAGACAAAAAGTGTTTTGGACGATTTATTTAGTAGATATCCTCCTGATGATGGAGAATTGGGTACAACTGGAGAGCAGAATAAAAAGGCTGATAAACAAAGGCGAAAGAAAGATGATATTTTCTTCAGGCCCTCAATGAACAAGGAAGAGATAATGAAGAAAGTGGAATCATATGCTGCTAGAGTCGAGAGTGTTGCGAATCTGAAAAAGATCTCAGAAGAAAGATCCAAGCTTCCAATTGCATCCTTTCAAGACGTCATTACATCAACAGTTGAATCTCACCAGCAGGTGGTTCTCATATCTGGTGAGACTGGATGTGGAAAGACAACACAGGTCCCCCAGTTTCTCATGGATTATATGTGGGGTAAGGGAGAGGCATGTAAGATAGTCTGTACTCAACCTCGGCGAATATCTGCTACATCAGTTTCTGAGCGGATCTCCCATGAAAGAGGAGAAAATGTTGGAACTGATGTTGGATACAAGATTCGATTGGAAAGTAAAGGTGGGAGGCACTCGTCAATTGTACTCTGCACAAATGGTATCCTTTTAAGAGTGTTGATTTCTGAAGGTTTGGGCAAATTAACTACGGAAGCTCCAGAAAAAAGTAGGAAAAATGTTGTGTCTGACTTAACTCACATTATTGTGGATGAGGTTCATGAAAGGGATCGCTATTCTGACTTCATTTTAGCAATTTTGAGGGACTTGCTTCCGTCATATCCTCGGTTACGGCTGATAATAATGAGTGCTACTATTGATGCTGGACGGTTTTCACAATATTTTGGTGGCTGTCCAATGATCAATGTTCCTGGATTCACCTTTCCTGTAAAAAATTTATATCTGGAGGATATACTTTCTGTAGTGAAATCTTCGGAAGAGAACCACCTTGATGAAAATATGGTGGGTGCTTCAGATGAGGACCCTGAGCTAACCGAAGAAGACAAGTTCGCTTTGGATGAAGCAATTCACTTGGCTTGGTTGAACGAAGAATTTGACGCCCTTCTAGAATTGGTGGAGGATGGATCCTCTCAACTCCTCAATTATCAGCATTCCGTGACTGGACTAACACCTCTAATGGTGTTTGCTGGAAAGGGTAGAGTTTCCAATGTTTGTATGCTGCTATCTTTTGGTGCCATGTGTGAATTACGGGCCAAGGACGGTATGACTGCATTGGAGTTAGCTAAACTAGGAGATCAGAAAGAAACTGCTGAAGCAATCAGAAAACATTTGGAAAGTTCCACGTCTATCTCCAAGGAAGAACAACGGTTGATTGGTAAATATCTTGCAAAAAATTCTAATTCTGTTGATGTTGCTCTTATAGAGCAGTTGATAGGGAAAATATGTCTTGATTCGAAAGAAGGAGCTATCCTTGTTTTCCTTCCTGGGTGGGATGATATCAGCAAGACTCGAGAAAGGCTGTCTATCAATCCTCTTTTCAAAGATGCATCAAAATTTTTGATAATATGTCTTCATTCAATGGTTCCCTCTAAAGAGCAAAAGAAGGTTTTCAGACGTCCACCTCCTGGCTGCCGCAAAATTATTCTCTCTACTAATATTGCTGAAACGGCCATTACCATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAATGTTTCCACTTTTCAATCTTCTTGGATCTCAAAGGCTAGTGCCAAGCAGCGAGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCATCTTTATTCGAAATTTCGTGCATCTTCTCTTCCTGATTTCCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAGCTTTGTCTGCAGGTGAAATTGCTTGATCCAAATTGTAGGATAGAGGTTTTCTTGCAGAAGACTTTGGACCCTCCAGTTTTTGATACCATCCGTAATGCAATCTTACTCCTTCAGGAAATTGGGGCTTTGTCACTTGATGAGAAACTGACTGAGCTTGGGGAGAAATTAGGTTCATTGCCTGTTCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGACCCTGCTCTAACTCTGGCATGTGCTTCTGACTACAGGGACCCCTTCACTCTTCCCATGTCACCGAGTGAAAGAAAGAAAGCCGCTGCTGCTAAAGCGGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAATTGGCTATTGTAGCTGCATTTGATTGCTGGAAGAATGCTAAAGAAAGGGGTCAAGAGGCCCGTTTCTGTTCTAATTACTATGTCTCTCCAAGCACTATGTCTATGCTGTGTGGCATGCGGAGACAACTCGAAATGGAACTAGTTAAAAATGGTTTTATACCTGAGGGTGTGAAAACTTGCAGCTTAAATGCTTGTGACCCTGGCATTCTCCATGCTGTCCTTGTGGCTGGGTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAACGGGCTGTTGTAGAAATCAGTTCAGGGGGTAGAGTTCTTTTGCACCCAGGGTCCCTTAACTTTGAGCTGTCACTCCGTCAAACGGATAGTAGACCTCTGATTGTTTATGATGAGATAACTCGCGGGGACGGCGGTACACACATAAGAAACTGTACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGAGATTGCTGTTGCCCCTGTTAAGGAGAATGATAACGGTAAAGACAATATTAAAAATGATGATGATGGAAATGGTGGAGCTGACGATAAAATGGATGTAGATAATAAATCAAATGAACAACCAGAAGAAATGATTATGTCCTCCCCTGATAATTCAGTAACTGTGGTTGTTGACCGTTGGTTGTATTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTGCAGCAATCCTATTCAAAGTAAAACATCCTAATAAAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTAACTGGTATTCCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAGATCAGCAATTTTGTACCTGGGAGGTCTGTAGGAACGCACAAGACAGTAAGTTGGTTTCTTAGATCACTTTCAAGTTATACTGATTTTACTGTTCCTGAAGTGAATGGAACACTTTTGAATGATCCGTTAAGTCAGAATTTTTTACCACTGCCTGATTCTAGAACAGCAAACCCGAGTGGCCCATTGAGCCCTAATTTTAGGGCTTCACCTAATTCAGTCTATGCAAGGTCAGCACTGCAGCCCCATAGAAAGCAGAAGCAGCCTCCCCATCCCCATCGAGAGCAGAAGCAGCCTCCGCAGGCAGTCAAACCCTCTCAACACCAAAATGCCACCCAACAGAAGCAGCCTCCCCAGCCAGTCAAACCCTCTCATGACCAAAATGCCACCCACCAGCAGCAGCAGCAGCACGCTCAAGAGCGCACTCCACGTAAACAGAGAAAGTCCCACAAGAAGAAGCCCCCATCAGGAGACCTCAGTTTAAATGGGTATGGATTAAGCATGTATGGACCATACGGTCCTCGGGGCGTTTCTTTAAAGCGGCCACGCAGTAACGGGGTGGGA

Coding sequence (CDS)

ATGTTTCATGCAGTTTTCACTTTTGAAGCTGATCTTTCGAAGCGTGAACGCGCTCTAGTGCATGAAGTGTGCAGGAAAATGGGTATGGCATCAAAGAGTTATGGGCATGGAGACCAACGTCGTGTTTCCGTATATAAATCCAAACTGCAAATGGAAACCATGAAATTTTCTGAAAAGACAAAAAGTGTTTTGGACGATTTATTTAGTAGATATCCTCCTGATGATGGAGAATTGGGTACAACTGGAGAGCAGAATAAAAAGGCTGATAAACAAAGGCGAAAGAAAGATGATATTTTCTTCAGGCCCTCAATGAACAAGGAAGAGATAATGAAGAAAGTGGAATCATATGCTGCTAGAGTCGAGAGTGTTGCGAATCTGAAAAAGATCTCAGAAGAAAGATCCAAGCTTCCAATTGCATCCTTTCAAGACGTCATTACATCAACAGTTGAATCTCACCAGCAGGTGGTTCTCATATCTGGTGAGACTGGATGTGGAAAGACAACACAGGTCCCCCAGTTTCTCATGGATTATATGTGGGGTAAGGGAGAGGCATGTAAGATAGTCTGTACTCAACCTCGGCGAATATCTGCTACATCAGTTTCTGAGCGGATCTCCCATGAAAGAGGAGAAAATGTTGGAACTGATGTTGGATACAAGATTCGATTGGAAAGTAAAGGTGGGAGGCACTCGTCAATTGTACTCTGCACAAATGGTATCCTTTTAAGAGTGTTGATTTCTGAAGGTTTGGGCAAATTAACTACGGAAGCTCCAGAAAAAAGTAGGAAAAATGTTGTGTCTGACTTAACTCACATTATTGTGGATGAGGTTCATGAAAGGGATCGCTATTCTGACTTCATTTTAGCAATTTTGAGGGACTTGCTTCCGTCATATCCTCGGTTACGGCTGATAATAATGAGTGCTACTATTGATGCTGGACGGTTTTCACAATATTTTGGTGGCTGTCCAATGATCAATGTTCCTGGATTCACCTTTCCTGTAAAAAATTTATATCTGGAGGATATACTTTCTGTAGTGAAATCTTCGGAAGAGAACCACCTTGATGAAAATATGGTGGGTGCTTCAGATGAGGACCCTGAGCTAACCGAAGAAGACAAGTTCGCTTTGGATGAAGCAATTCACTTGGCTTGGTTGAACGAAGAATTTGACGCCCTTCTAGAATTGGTGGAGGATGGATCCTCTCAACTCCTCAATTATCAGCATTCCGTGACTGGACTAACACCTCTAATGGTGTTTGCTGGAAAGGGTAGAGTTTCCAATGTTTGTATGCTGCTATCTTTTGGTGCCATGTGTGAATTACGGGCCAAGGACGGTATGACTGCATTGGAGTTAGCTAAACTAGGAGATCAGAAAGAAACTGCTGAAGCAATCAGAAAACATTTGGAAAGTTCCACGTCTATCTCCAAGGAAGAACAACGGTTGATTGGTAAATATCTTGCAAAAAATTCTAATTCTGTTGATGTTGCTCTTATAGAGCAGTTGATAGGGAAAATATGTCTTGATTCGAAAGAAGGAGCTATCCTTGTTTTCCTTCCTGGGTGGGATGATATCAGCAAGACTCGAGAAAGGCTGTCTATCAATCCTCTTTTCAAAGATGCATCAAAATTTTTGATAATATGTCTTCATTCAATGGTTCCCTCTAAAGAGCAAAAGAAGGTTTTCAGACGTCCACCTCCTGGCTGCCGCAAAATTATTCTCTCTACTAATATTGCTGAAACGGCCATTACCATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAATGTTTCCACTTTTCAATCTTCTTGGATCTCAAAGGCTAGTGCCAAGCAGCGAGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCATCTTTATTCGAAATTTCGTGCATCTTCTCTTCCTGATTTCCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAGCTTTGTCTGCAGGTGAAATTGCTTGATCCAAATTGTAGGATAGAGGTTTTCTTGCAGAAGACTTTGGACCCTCCAGTTTTTGATACCATCCGTAATGCAATCTTACTCCTTCAGGAAATTGGGGCTTTGTCACTTGATGAGAAACTGACTGAGCTTGGGGAGAAATTAGGTTCATTGCCTGTTCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGACCCTGCTCTAACTCTGGCATGTGCTTCTGACTACAGGGACCCCTTCACTCTTCCCATGTCACCGAGTGAAAGAAAGAAAGCCGCTGCTGCTAAAGCGGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAATTGGCTATTGTAGCTGCATTTGATTGCTGGAAGAATGCTAAAGAAAGGGGTCAAGAGGCCCGTTTCTGTTCTAATTACTATGTCTCTCCAAGCACTATGTCTATGCTGTGTGGCATGCGGAGACAACTCGAAATGGAACTAGTTAAAAATGGTTTTATACCTGAGGGTGTGAAAACTTGCAGCTTAAATGCTTGTGACCCTGGCATTCTCCATGCTGTCCTTGTGGCTGGGTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAACGGGCTGTTGTAGAAATCAGTTCAGGGGGTAGAGTTCTTTTGCACCCAGGGTCCCTTAACTTTGAGCTGTCACTCCGTCAAACGGATAGTAGACCTCTGATTGTTTATGATGAGATAACTCGCGGGGACGGCGGTACACACATAAGAAACTGTACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGAGATTGCTGTTGCCCCTGTTAAGGAGAATGATAACGGTAAAGACAATATTAAAAATGATGATGATGGAAATGGTGGAGCTGACGATAAAATGGATGTAGATAATAAATCAAATGAACAACCAGAAGAAATGATTATGTCCTCCCCTGATAATTCAGTAACTGTGGTTGTTGACCGTTGGTTGTATTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTGCAGCAATCCTATTCAAAGTAAAACATCCTAATAAAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTAACTGGTATTCCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAGATCAGCAATTTTGTACCTGGGAGGTCTGTAGGAACGCACAAGACAGTAAGTTGGTTTCTTAGATCACTTTCAAGTTATACTGATTTTACTGTTCCTGAAGTGAATGGAACACTTTTGAATGATCCGTTAAGTCAGAATTTTTTACCACTGCCTGATTCTAGAACAGCAAACCCGAGTGGCCCATTGAGCCCTAATTTTAGGGCTTCACCTAATTCAGTCTATGCAAGGTCAGCACTGCAGCCCCATAGAAAGCAGAAGCAGCCTCCCCATCCCCATCGAGAGCAGAAGCAGCCTCCGCAGGCAGTCAAACCCTCTCAACACCAAAATGCCACCCAACAGAAGCAGCCTCCCCAGCCAGTCAAACCCTCTCATGACCAAAATGCCACCCACCAGCAGCAGCAGCAGCACGCTCAAGAGCGCACTCCACGTAAACAGAGAAAGTCCCACAAGAAGAAGCCCCCATCAGGAGACCTCAGTTTAAATGGGTATGGATTAAGCATGTATGGACCATACGGTCCTCGGGGCGTTTCTTTAAAGCGGCCACGCAGTAACGGGGTGGGA

Protein sequence

MFHAVFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVLDDLFSRYPPDDGELGTTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTPLMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATEISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLSQNFLPLPDSRTANPSGPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQPVKPSHDQNATHQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSLKRPRSNGVG

Homology

[Close]

BLAST of MS002636 vs. NCBI nr
Match: XP_022136467.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Momordica charantia])

HSP 1 Score: 2131.3 bits (5521), Expect = 0.0e+00
Identity = 1083/1089 (99.45%), Postives = 1086/1089 (99.72%), Query Frame = 0


Query: 175  MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 234
            MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL
Sbjct: 1    MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 60

Query: 235  CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 294
            CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL
Sbjct: 61   CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 120

Query: 295  PSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 354
            PSYP+LRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD
Sbjct: 121  PSYPQLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 180

Query: 355  ENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 414
            ENMVGASDEDPELTEEDKFA DEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP
Sbjct: 181  ENMVGASDEDPELTEEDKFAFDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 240

Query: 415  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 474
            LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS
Sbjct: 241  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 300

Query: 475  KEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 534
            KEEQRLIGKYLAKNSNSVDV+LIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP
Sbjct: 301  KEEQRLIGKYLAKNSNSVDVSLIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 360

Query: 535  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 594
            LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW
Sbjct: 361  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 420

Query: 595  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 654
            MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI
Sbjct: 421  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 480

Query: 655  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 714
            KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG
Sbjct: 481  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 540

Query: 715  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 774
            EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL
Sbjct: 541  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 600

Query: 775  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 834
            ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN
Sbjct: 601  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 660

Query: 835  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 894
            GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG
Sbjct: 661  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 720

Query: 895  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 954
            SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG
Sbjct: 721  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 780

Query: 955  KDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 1014
            KDNIKNDDDGNGGA+DKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL
Sbjct: 781  KDNIKNDDDGNGGAEDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 840

Query: 1015 YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 1074
            YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT
Sbjct: 841  YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 900

Query: 1075 EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLSQNFLPLPDSRTANPS 1134
            EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNG LLNDPLSQNFLPLPDSRTANPS
Sbjct: 901  EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGALLNDPLSQNFLPLPDSRTANPS 960

Query: 1135 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1194
            GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP
Sbjct: 961  GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1020

Query: 1195 VKPSHDQNATH-QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL 1254
            VKPSHDQNATH QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL
Sbjct: 1021 VKPSHDQNATHQQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL 1080

Query: 1255 KRPRSNGVG 1263
            KRPRSNGVG
Sbjct: 1081 KRPRSNGVG 1089

[Close]

BLAST of MS002636 vs. NCBI nr
Match: XP_022136468.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X2 [Momordica charantia])

HSP 1 Score: 2078.9 bits (5385), Expect = 0.0e+00
Identity = 1058/1064 (99.44%), Postives = 1061/1064 (99.72%), Query Frame = 0


Query: 175  MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 234
            MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL
Sbjct: 1    MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 60

Query: 235  CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 294
            CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL
Sbjct: 61   CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 120

Query: 295  PSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 354
            PSYP+LRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD
Sbjct: 121  PSYPQLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 180

Query: 355  ENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 414
            ENMVGASDEDPELTEEDKFA DEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP
Sbjct: 181  ENMVGASDEDPELTEEDKFAFDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 240

Query: 415  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 474
            LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS
Sbjct: 241  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 300

Query: 475  KEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 534
            KEEQRLIGKYLAKNSNSVDV+LIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP
Sbjct: 301  KEEQRLIGKYLAKNSNSVDVSLIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 360

Query: 535  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 594
            LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW
Sbjct: 361  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 420

Query: 595  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 654
            MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI
Sbjct: 421  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 480

Query: 655  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 714
            KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG
Sbjct: 481  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 540

Query: 715  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 774
            EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL
Sbjct: 541  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 600

Query: 775  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 834
            ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN
Sbjct: 601  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 660

Query: 835  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 894
            GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG
Sbjct: 661  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 720

Query: 895  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 954
            SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG
Sbjct: 721  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 780

Query: 955  KDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 1014
            KDNIKNDDDGNGGA+DKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL
Sbjct: 781  KDNIKNDDDGNGGAEDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 840

Query: 1015 YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 1074
            YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT
Sbjct: 841  YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 900

Query: 1075 EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLSQNFLPLPDSRTANPS 1134
            EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNG LLNDPLSQNFLPLPDSRTANPS
Sbjct: 901  EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGALLNDPLSQNFLPLPDSRTANPS 960

Query: 1135 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1194
            GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP
Sbjct: 961  GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1020

Query: 1195 VKPSHDQNATH-QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG 1238
            VKPSHDQNATH QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG
Sbjct: 1021 VKPSHDQNATHQQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG 1064

[Close]

BLAST of MS002636 vs. NCBI nr
Match: XP_038906440.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida])

HSP 1 Score: 2061.2 bits (5339), Expect = 0.0e+00
Identity = 1069/1277 (83.71%), Postives = 1145/1277 (89.66%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERALVHEVCRKMGMASKS GHG+QRRVSVYKSK+QMETMKFSEKTK+VL
Sbjct: 39   VFTFEADLSKRERALVHEVCRKMGMASKSSGHGNQRRVSVYKSKMQMETMKFSEKTKTVL 98

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDG+LG  T G+ NKKADKQRRKKDDIF+RPSMNKEEIMKK+ SY   ++S
Sbjct: 99   DDLFSMYPPDDGDLGKETAGKHNKKADKQRRKKDDIFWRPSMNKEEIMKKLGSYT--MKS 158

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            VANLKKISEERSKLPIASFQDVITSTVESH QVVLISGETGCGKTTQVPQFL+DYMWGKG
Sbjct: 159  VANLKKISEERSKLPIASFQDVITSTVESH-QVVLISGETGCGKTTQVPQFLLDYMWGKG 218

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            E CKIVCTQPRRISA SVSERIS+ERGENVG+D+GYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 219  ETCKIVCTQPRRISAISVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLR 278

Query: 245  VLISEGLGKLTTEAPEKSR--KNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRL 304
            VLISEGLGKLT EA EKSR  KNVVSDLTHIIVDEVHERDRYSDFIL ILRDLLPSYP+L
Sbjct: 279  VLISEGLGKLTMEASEKSRKNKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQL 338

Query: 305  RLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGA 364
            RLI+MSATIDA RFS+YFGGCP+INVPGFT+PVKN YLED+LS+VKSSEENHLD+++VG 
Sbjct: 339  RLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGV 398

Query: 365  SDEDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFA 424
            SDE+PELT+EDK ALDEAI +AWLN+EFD LLELV  + SSQ+ NYQHSVTGLTPLMV A
Sbjct: 399  SDEEPELTDEDKLALDEAIDMAWLNDEFDPLLELVASNRSSQIFNYQHSVTGLTPLMVLA 458

Query: 425  GKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQR 484
            GKGRVS+VCMLLSFGAMCELRAKDG TALELA+ GDQKETAEAIR HLESS S SKEE+R
Sbjct: 459  GKGRVSDVCMLLSFGAMCELRAKDGTTALELAERGDQKETAEAIRNHLESSMSNSKEERR 518

Query: 485  LIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDA 544
            LIG YLAKNSNSVD+ LIEQL+GKICLDSKEGAILVFLPGWDDISKTRERLS+NPLFKDA
Sbjct: 519  LIGTYLAKNSNSVDIGLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDA 578

Query: 545  SKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKS 604
            SKFLII LHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKS
Sbjct: 579  SKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKS 638

Query: 605  YDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPI 664
            YDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKF+A SLPDFQVPEIKRMP+
Sbjct: 639  YDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFQALSLPDFQVPEIKRMPM 698

Query: 665  EELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGS 724
            EELCLQVKLLDPNCRIE FLQKTLDPPVFDTIRNAIL+LQ+IGALSLDEKLTELGEKLGS
Sbjct: 699  EELCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGS 758

Query: 725  LPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYG 784
            LPVHPVTSKMLIFAILMNCLDPALTLACASDY+DPFTLPM PSERKKAAAAKAELASLYG
Sbjct: 759  LPVHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYG 818

Query: 785  GHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPE 844
            GHSDQLA+VAAFDCWKNAK+RGQEARFCS YY+S STM+ML GMRRQLEMELV+NGFIPE
Sbjct: 819  GHSDQLAVVAAFDCWKNAKDRGQEARFCSKYYISLSTMTMLSGMRRQLEMELVQNGFIPE 878

Query: 845  GVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFE 904
             V TCS+NACDPGILHAVLVAGLYPMVGRLLPPQ+KGKRAVVE  SG RVLLHP SLNFE
Sbjct: 879  DVSTCSVNACDPGILHAVLVAGLYPMVGRLLPPQRKGKRAVVETGSGSRVLLHPQSLNFE 938

Query: 905  LSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIK 964
            LSL+QTD+RPLIVYDEITRGDGGTHIRNCTVVGPLP+LMVAKEIAVAP +ENDN KD I+
Sbjct: 939  LSLKQTDNRPLIVYDEITRGDGGTHIRNCTVVGPLPILMVAKEIAVAPAQENDNCKDGIE 998

Query: 965  NDDDGNGGA------DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQ 1024
            NDD+GN  A      ++KMD++NKSN+QPEEMIMSSPDNSVTVVVDRWL FWSKALDIAQ
Sbjct: 999  NDDNGNDEAGIVETVEEKMDIENKSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQ 1058

Query: 1025 LYCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNA 1084
            LYCLRERLS+AILFKVKHPN VLP VL ASMHAL+CILSYDGL+GI LESVEMLTSMVNA
Sbjct: 1059 LYCLRERLSSAILFKVKHPNGVLPSVLNASMHALSCILSYDGLSGISLESVEMLTSMVNA 1118

Query: 1085 TEISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGT-LLNDPLSQNFLPLPDSRTAN 1144
            TEI +F PGRS+G+HK VSWFL+S S+Y +FTVPE NGT +LNDPLSQN LP PD R  N
Sbjct: 1119 TEIGHFAPGRSIGSHKKVSWFLKSHSNYNEFTVPEANGTSILNDPLSQNLLPPPDFRKGN 1178

Query: 1145 PSGPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPP 1204
            PS   +PNFRASPNSVYARS  Q HR+ K                             P 
Sbjct: 1179 PSDQSTPNFRASPNSVYARSTPQSHREHK-----------------------------PF 1238

Query: 1205 QPVKPSHDQNATHQQQQQHAQERTPRKQRKSHK-------KKPPSGDLSLNGYGLSMYGP 1263
            +P KPS DQ+AT   +QQHAQE   RKQRK HK       +KPPSGDLSLNGYGL+ YGP
Sbjct: 1239 KPGKPSRDQSAT---EQQHAQENNTRKQRKPHKEHMAAKQQKPPSGDLSLNGYGLNSYGP 1280

[Close]

BLAST of MS002636 vs. NCBI nr
Match: XP_022941757.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata] >XP_022941758.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 2058.1 bits (5331), Expect = 0.0e+00
Identity = 1071/1268 (84.46%), Postives = 1141/1268 (89.98%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERALVHE CRKMG+ SKSYG GDQRRVS+YKSK Q +TMKFSEKTKSVL
Sbjct: 39   VFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVL 98

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDGELG  T G+  KK  KQ RKKDDIF+RPSMNKEEIMKKVESY  RV+S
Sbjct: 99   DDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKS 158

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            VANLKKIS +RSKLPIASFQDVITSTVESH QVVLISGETGCGKTTQVPQFL+DYMWGKG
Sbjct: 159  VANLKKISGDRSKLPIASFQDVITSTVESH-QVVLISGETGCGKTTQVPQFLLDYMWGKG 218

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            EACKI+CTQPRRISATSVSERIS+ERGENVG+DVGYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 219  EACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLR 278

Query: 245  VLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRL 304
            VLISEGLGKLTTEA EKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLP+YP LRL
Sbjct: 279  VLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRL 338

Query: 305  IIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASD 364
            I+MSATIDA RFS+YFGGCP+I+VPGFTFPVKN YLED+LS+VKSSEENHLD++ VGASD
Sbjct: 339  ILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASD 398

Query: 365  EDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGK 424
            E+ ELTEEDK +LDEAIHLAWLN+EFD LLELV  +GSSQ+ NYQHSVTGL+PLMV AGK
Sbjct: 399  EETELTEEDKLSLDEAIHLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGK 458

Query: 425  GRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLI 484
            GRVS+VCMLLSFGAMCEL+AKDGMTALE+A+ G+ KETAEAIRKHLESS S SKEEQRLI
Sbjct: 459  GRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLI 518

Query: 485  GKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 544
            GKYLA+NSNSVDVALI+ L+GKICLDSKEGAILVFLPGWDDISKTRERLSINP+FKDASK
Sbjct: 519  GKYLARNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 578

Query: 545  FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 604
            FLII LHSMVPSKEQKKVF+RPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD
Sbjct: 579  FLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 638

Query: 605  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 664
            PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE
Sbjct: 639  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 698

Query: 665  LCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLP 724
            LCLQVKLLDPNCRIE FLQKTLDPPVFDTIRNAIL+LQ+IGALSLDEKLTELGEKLGSLP
Sbjct: 699  LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLP 758

Query: 725  VHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGH 784
            VHPVTSKMLIFAILMNCL+PALTLACASDY+DPFTLPM PSERKKAAAAKAELASLYGGH
Sbjct: 759  VHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 818

Query: 785  SDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGV 844
            SDQLA+VAAFDCWKNAK RGQEARFCS Y++SPSTMSML GMRRQLEMELV+NGFIPE +
Sbjct: 819  SDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 878

Query: 845  KTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELS 904
             TCSLNA DPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVE  SGGRVLLH  SLNFELS
Sbjct: 879  STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 938

Query: 905  LRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKND 964
             + TD+ PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAP KENDNGK +I ND
Sbjct: 939  HKLTDNCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVND 998

Query: 965  DDGNGGA------DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1024
              GN  A      +DKMD++NKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY
Sbjct: 999  TYGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1058

Query: 1025 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATE 1084
            CLRERLSAAILFKVKHPNK+LPPVLGASMHALACILSYDGLTGI LESVEMLT+MV+ATE
Sbjct: 1059 CLRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATE 1118

Query: 1085 ISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTL-LNDPLSQNFLPLPDSRTANPS 1144
            ISNFVPGRS  THK VS F RSLS+Y DFTVPE +GT  LN P SQNFLP PD R ANPS
Sbjct: 1119 ISNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPS 1178

Query: 1145 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1204
             P SPNFRA PNSVYARS LQPHR QK            PQ  KP Q QNATQQ+  P  
Sbjct: 1179 DPSSPNFRAFPNSVYARSTLQPHRGQKH-----------PQPAKPFQDQNATQQQHAP-- 1238

Query: 1205 VKPSHDQNATHQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSLK 1263
                  ++ T +Q++   + +  ++Q+    +KPPSG+ SLNGYGLS YGPYG RG+SLK
Sbjct: 1239 ------EHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLK 1286

[Close]

BLAST of MS002636 vs. NCBI nr
Match: XP_023512682.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512690.1 DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1070/1268 (84.38%), Postives = 1140/1268 (89.91%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERALVHE CRKMG+ SKSYG GDQRRVS+YKSK Q +TMKFSEKTKSVL
Sbjct: 39   VFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVL 98

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDGELG  T G+  KKA K  RKKDDIF+RPSMNKEEIMKKVESY  RV+S
Sbjct: 99   DDLFSSYPPDDGELGKETIGKSKKKAHKPSRKKDDIFWRPSMNKEEIMKKVESYTTRVKS 158

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            VANLKKIS +RSKLPIASFQDVITSTVESH QVVLISGETGCGKTTQVPQFL+DYMWGKG
Sbjct: 159  VANLKKISGDRSKLPIASFQDVITSTVESH-QVVLISGETGCGKTTQVPQFLLDYMWGKG 218

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            EACKI+CTQPRRISATSVSERIS+ERGENVG+DVGYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 219  EACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLR 278

Query: 245  VLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRL 304
            VLISEGLGKLTTEA EKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLP+YP LRL
Sbjct: 279  VLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRL 338

Query: 305  IIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASD 364
            I+MSATIDA RFS+YFGGCP+I+VPGFTFPVKN YLED+LS+VKSSEENHLD++ VGASD
Sbjct: 339  ILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASD 398

Query: 365  EDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGK 424
            E+ ELTEEDK +LDEAIHLAWLN+EFD LLELV  +GSSQ+ NYQHSVTGL+PLMV AGK
Sbjct: 399  EETELTEEDKLSLDEAIHLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGK 458

Query: 425  GRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLI 484
            GRVS+VCMLLSFGAMCEL+AKDGMTALE+A+ G+ KETAEAIRKHLESS S SKEEQRLI
Sbjct: 459  GRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLI 518

Query: 485  GKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 544
            GKYLA+NSNSVDVALI+ L+GKICLDSKEGAILVFLPGWDDISKTRERLSINP+FKDASK
Sbjct: 519  GKYLARNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 578

Query: 545  FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 604
            FLII LHSMVPSKEQKKVF+RPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD
Sbjct: 579  FLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 638

Query: 605  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 664
            PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE
Sbjct: 639  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 698

Query: 665  LCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLP 724
            LCLQVKLLDPNCRIE FLQKTLDPPVFDTIRNAIL+LQ+IGALS DEKLTELGEKLGSLP
Sbjct: 699  LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSHDEKLTELGEKLGSLP 758

Query: 725  VHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGH 784
            VHPVTSKMLIFAILMNCL+PALTLACASDY+DPFTLPM PSERKKAAAAKAELASLYGGH
Sbjct: 759  VHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 818

Query: 785  SDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGV 844
            SDQLA+VAAFDCWKNAK RGQEARFCS Y++SPSTMSML GMRRQLEMELV+NGFIPE +
Sbjct: 819  SDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 878

Query: 845  KTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELS 904
             TCSLNA DPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVE  SGGRVLLH  SLNFELS
Sbjct: 879  STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 938

Query: 905  LRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKND 964
             + TD  PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAP KENDNGK +I ND
Sbjct: 939  HKLTDYCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVND 998

Query: 965  DDGNGGA------DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1024
             DGN  A      +DKMD++NK NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY
Sbjct: 999  TDGNDEAGVVETVEDKMDIENKPNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1058

Query: 1025 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATE 1084
            CLRERLSAAILFKVKHPNK+LPPVLGASMHALACILSYDGLTGI LESVEMLTSMV+ATE
Sbjct: 1059 CLRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTSMVDATE 1118

Query: 1085 ISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTL-LNDPLSQNFLPLPDSRTANPS 1144
            ISNFVPGRS  THK VS F RSLS+Y DFTVPE +GT  LN P SQNFLP PD R ANPS
Sbjct: 1119 ISNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPS 1178

Query: 1145 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1204
             P SPNFRA PNSVYARS LQPHR+Q+            PQ  KP Q QNATQQ+  P  
Sbjct: 1179 DPSSPNFRAFPNSVYARSTLQPHREQEH-----------PQPAKPFQDQNATQQQHAP-- 1238

Query: 1205 VKPSHDQNATHQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSLK 1263
                  ++ T +Q++   + +  ++Q+    +KPPSG+ SLNGYGLS YGPYG RG+SLK
Sbjct: 1239 ------EHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLK 1286

[Close]

BLAST of MS002636 vs. ExPASy Swiss-Prot
Match: F4INY4 (DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT1 PE=2 SV=1)

HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 710/1278 (55.56%), Postives = 904/1278 (70.74%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKS---------------KL 64
            V+TFE +LS  ER ++H++CRKMG+ SKS G G+QRR+S++KS               K 
Sbjct: 39   VYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKE 98

Query: 65   QMETMKFSEKTKSVLDDLFSRYPPDDGELGTTG--EQNKKADKQRRKKDDIFFRPSMNKE 124
            +++ + F      +L +LF+ YPP DG+   T   + +    KQ + KDD F +P ++ E
Sbjct: 99   KLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSE 158

Query: 125  EIMKKVESYAARVESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKT 184
            EI++KV S ++R++    LK+I++ RSKLPI SF+D ITS VES+ QV+LISGETGCGKT
Sbjct: 159  EILEKVASLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESN-QVILISGETGCGKT 218

Query: 185  TQVPQFLMDYMW-GKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKG 244
            TQVPQ+L+D+MW  K E CKIVCTQPRRISA SVSERIS ERGE++G ++GYK+RL+SKG
Sbjct: 219  TQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKG 278

Query: 245  GRHSSIVLCTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFI 304
            GRHSS+V CTNGILLRVL+ +G              + VSD+THIIVDE+HERD YSDF+
Sbjct: 279  GRHSSVVFCTNGILLRVLVGKG------------SVSSVSDITHIIVDEIHERDCYSDFM 338

Query: 305  LAILRDLLPSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVK 364
            LAI+RDLLPS P LRLI+MSAT+DA RFS YFGGCP++ VPGFT+PV+ LYLED+LS++K
Sbjct: 339  LAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILK 398

Query: 365  SSEENHLDENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVED-GSSQLLNY 424
            S  +NHL    +  SD   +LT+EDK ALDEAI LAW N+EFDALL+LV   GS ++ NY
Sbjct: 399  SGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNY 458

Query: 425  QHSVTGLTPLMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRK 484
            QH  T LTPLMVFAGKGR+S+VCMLLSFGA   L++KDGMTALELA+  +Q E A+ IR+
Sbjct: 459  QHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIRE 518

Query: 485  HLESSTSISKEEQRLIGKYLAK-NSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDIS 544
            H ++S S S++ Q+L+ KY+A  N   VDV+LI+QL+ KIC DS++GAILVFLPGWDDI+
Sbjct: 519  HADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDIN 578

Query: 545  KTRERLSINPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITID 604
            KTR+RL  NP F D++KF IICLHSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TID
Sbjct: 579  KTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTID 638

Query: 605  DVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRAS 664
            DVVYVIDSG MKEKSYDPY+NVST QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+
Sbjct: 639  DVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAA 698

Query: 665  SLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGAL 724
            S+PDF+VPEIKRMP+EELCLQVK+LDPNC+   FLQK LDPPV  +I NA+ +LQ+IGAL
Sbjct: 699  SMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGAL 758

Query: 725  SLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSER 784
            +  E+LTELGEK G LPVHP+ SKML FA+L+NCLDPALTLACA+DY++PFT+PMSP ER
Sbjct: 759  TPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVER 818

Query: 785  KKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMR 844
            +KAAAAK ELASL GG SD LA+VAAF+CWKNAK RG  A FCS Y+VSPS M ML  MR
Sbjct: 819  QKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMR 878

Query: 845  RQLEMELVKNGFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEIS 904
             QLE EL ++G IP  + +CS N+ DPGIL AVL  GLYPMVGRL P     +R +VE +
Sbjct: 879  SQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETA 938

Query: 905  SGGRVLLHPGSLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIA 964
            SG +V +H  S NF LS ++ D   L+V+DEITRGDGG HIRNCTV   LPLL+++ EIA
Sbjct: 939  SGAKVRVHSLSNNFNLSSKKYD-ESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIA 998

Query: 965  VAPVKENDNGKDNIKNDDDGNGGADDKMDVDNKSNEQPEEM----------IMSSPDNSV 1024
            VAP   +D+   N + +DD    A+   +V   +NE+  ++          +MSSP+NSV
Sbjct: 999  VAPTGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEGMDIHKEESRRGAKMMSSPENSV 1058

Query: 1025 TVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYD 1084
             +VVDRWL F + AL++AQ+Y LRERL A+ILFKV HP + LPP LGASMHA+A ILSYD
Sbjct: 1059 KLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYD 1118

Query: 1085 GLTGIPLESVEMLTSMVNATEISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPE---VNG 1144
            G  G+     E +    + TE+ +     + G  +  + FL SL  +   ++ E    + 
Sbjct: 1119 GHAGLSCPP-ESMVPKHSRTEMYD-----TGGWEEKPNSFLNSL--FWSLSLKENKHPSH 1178

Query: 1145 TLLNDPLSQNFLPLPDSRTANPSGPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQK 1204
            T  N   + N  P     T   S P   N++   N     +     +K+K   +P     
Sbjct: 1179 TNRNQQHNYNMAP-----TEAASIPRQQNYK-QRNPKATNNTDSGKKKEKMFVNPTNRIN 1238

Query: 1205 QPPQAV--KPSQHQNATQQKQPPQPVKPSHDQNATHQQQQQHAQERTP--RKQRKSHKKK 1246
            QP  A   KPS+H++A       +      DQ   ++Q     +E      K + S K K
Sbjct: 1239 QPEAASTGKPSKHKSANSSGSSNKKENMPSDQAYGNKQHNTVPREAAAPMAKNQSSKKTK 1288

[Close]

BLAST of MS002636 vs. ExPASy Swiss-Prot
Match: F4IDQ6 (DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH PE=1 SV=1)

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 647/1294 (50.00%), Postives = 857/1294 (66.23%), Query Frame = 0


Query: 6    FTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYK------------------- 65
            + FE  L+  ER ++H++CR MG+ SKS G G++RR+S++K                   
Sbjct: 36   YVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQK 95

Query: 66   -----------SKLQMET--------------------MKFSEKTKSVLDDLFSRYPPDD 125
                       SK + ET                    + F  + K+VL DLF+RYPP D
Sbjct: 96   EKEGDGISKSYSKHRYETRFQKAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCD 155

Query: 126  GE-LGTTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVESVANLKKISEERS 185
            G+  GT+       +     KDD F +P M K +I   V S ++R++   + ++I E RS
Sbjct: 156  GDTTGTSLGIYTTGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARS 215

Query: 186  KLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMW-GKGEACKIVCTQPR 245
            KLPIASF+D I S VES+ QVVLI+GETGCGKTTQVPQ+L+D+MW  K EACKI+CTQPR
Sbjct: 216  KLPIASFRDAIISAVESN-QVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPR 275

Query: 246  RISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLT 305
            RISA SVS+RIS ERGE +G  VGYK+RL+S+GGR SS+V CTNGILLRVLI +G+    
Sbjct: 276  RISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGV---- 335

Query: 306  TEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRLIIMSATIDAGR 365
                     + V D+THIIVDE+HERD YSDF+L ILRDLLPS P LRLI+MSAT+DA R
Sbjct: 336  --------NSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAER 395

Query: 366  FSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASDEDPELTEEDKF 425
            FS+YFGGCP++ VPGFT+PV+  +L+D LSV+ S + +HL       S    +  +EDK 
Sbjct: 396  FSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHL------LSAVKRDFKDEDKV 455

Query: 426  ALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGKGRVSNVCMLLS 485
            +LDEAI LAW N+EFD L++LV  +GS +  NYQ+S TGLTPLMVFAGKGRVS+VC LLS
Sbjct: 456  SLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLS 515

Query: 486  FGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLIGKYLAK-NSNS 545
             GA C L++K+G+TALELA+  +Q ETA+ IR+H  +  S S++ Q L+ KY+A      
Sbjct: 516  VGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEE 575

Query: 546  VDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIICLHSMV 605
            VDV LI +L+ KIC DSK+GAILVFLPGW++ISKT+E+L  +  F  ++KF+I+CLHS V
Sbjct: 576  VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRV 635

Query: 606  PSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQS 665
            P++EQKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY++VST QS
Sbjct: 636  PAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQS 695

Query: 666  SWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP 725
            SW+SKA+AKQR GRAGRCQ GICYHLYSK RA+SLP+++VPE+ RMP++ELCLQVK+LDP
Sbjct: 696  SWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDP 755

Query: 726  NCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLPVHPVTSKMLI 785
            NC +  FLQK +DPPV  +I NA+++L++IGAL+ +E+LTELG+K G LPVHP  SKM+ 
Sbjct: 756  NCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIY 815

Query: 786  FAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGHSDQLAIVAAF 845
            FAIL+NCLDPAL LACA+D +DPFT+P+SP +RKKAAAAK ELASLYG HSD LA VAAF
Sbjct: 816  FAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAF 875

Query: 846  DCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGVKTCSLNACDP 905
             CWKNAK  GQ   FCS Y++S   M  L  + R+L+ EL ++G IP     CSLNA DP
Sbjct: 876  QCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDP 935

Query: 906  GILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTDSRPLI 965
            GIL AV+  GLYPM+GR+ P  K   R+V+E  +G +V +   S N ++S  + D   LI
Sbjct: 936  GILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFD-EALI 995

Query: 966  VYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKNDDDGN---GGA 1025
            V+DEITRGD G  IR+CTV+  +P+L+ ++EIAV+  +      D +K+DD+ +   G  
Sbjct: 996  VFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTE----SYDAVKSDDEEDHKVGNV 1055

Query: 1026 DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFK 1085
             D MD+D K   +P E IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL A+ILFK
Sbjct: 1056 GDAMDID-KEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFK 1115

Query: 1086 VKHPNKVLPPVLGASMHALACILSYDGL--TGIPLESVEMLTSMVNATEISNFVPGRSVG 1145
            VKHP + LPP LGASM+A+A +LSYD L  + +   +V+ +TS+V+AT   + +P     
Sbjct: 1116 VKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITSVVDATSPRDDIPS---- 1175

Query: 1146 THKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLS-QNFLPLPDSRTANPSGPLSPNFRASP 1205
                        ++  +    + N T +   L   N L L +   + PS     N +  P
Sbjct: 1176 ------------TNPNELREHDPNTTPMGSKLELANKLGLGNMEESLPSNFADGNEQPDP 1235

Query: 1206 NSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQPVKPSHDQ---N 1237
            N+          +++K      R +      +   +      ++ PP  +   ++Q    
Sbjct: 1236 NTSPVEDVSAATKQKKMQSESKRCKSLNNVDLGNIEENFGNMEENPPSDLAIGNEQTLPK 1288

[Close]

BLAST of MS002636 vs. ExPASy Swiss-Prot
Match: Q9H6S0 (3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2)

HSP 1 Score: 577.4 bits (1487), Expect = 3.9e-163
Identity = 392/1147 (34.18%), Postives = 606/1147 (52.83%), Query Frame = 0


Query: 8    FEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYK-----SKLQMETMKFSEKTKS 67
            F + L+  ERA +H + + +G+ SKS G G  R ++V K     +   M T   +  TK 
Sbjct: 66   FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNTKH 125

Query: 68   VLDDLFSRYPPDDGELGTTGEQNKKADKQRRKKDDIFFRPSMNKE--EIMKKVESYAARV 127
             +  L  R+P       T  E+ +   K  R   ++F   + N+E  +   ++ +   ++
Sbjct: 126  AVRSLIQRFPV------TNKERTELLPKTER--GNVFAVEAENREMSKTSGRLNNGIPQI 185

Query: 128  ESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWG 187
                   +    R  LP+   Q+ I   ++ + +VVLI GETG GKTTQ+PQFL+D  + 
Sbjct: 186  PVKRGESEFDSFRQSLPVFEKQEEIVKIIKEN-KVVLIVGETGSGKTTQIPQFLLDDCFK 245

Query: 188  KGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGIL 247
             G  C+I CTQPRR++A +V+ER++ ER E +G  +GY+IRLES+    + +  CTNG+L
Sbjct: 246  NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVL 305

Query: 248  LRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRL 307
            LR L+              +  + +S +TH+IVDEVHERDR+SDF+L  LRDLL  +P L
Sbjct: 306  LRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTL 365

Query: 308  RLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDIL--------SVVKSSEENH 367
            +LI+ SA +D   F +YFG CP+I + G  F VK ++LEDIL         ++K  +E  
Sbjct: 366  KLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQ 425

Query: 368  LDE-------------------------NMVGASDE-----------DPELTEEDKFAL- 427
             +E                          ++  +DE             +LTE+D   L 
Sbjct: 426  QEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCLE 485

Query: 428  -------DEAIHLAWLNEEFDAL-----LELVEDGSSQLLNYQHSVTGLTPLMVFAGKGR 487
                   D  +   WL+++ DA      L L E+ S   ++Y+HS T  T LMV AG+G 
Sbjct: 486  PWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVS---VDYRHSETSATALMVAAGRGF 545

Query: 488  VSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHL---------ESS---- 547
             S V  L+S GA    +A +G  AL+ AK   Q E  + +  +          ESS    
Sbjct: 546  ASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQT 605

Query: 548  --TSISKEEQRLIGKY-LAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTR 607
              + +S E++ L+  Y  + +   VD+ LI  L+  IC     GA+L+FLPG+D+I   R
Sbjct: 606  NGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLR 665

Query: 608  ERLSI-NPLFKDAS-KFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDD 667
            +R+   +  F D++ ++ +  LHS + + +QKKV + PP G RKIILSTNIAET+IT++D
Sbjct: 666  DRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 725

Query: 668  VVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASS 727
            VV+VIDSG +KEKS+D  + V+  +  WISKASA QR+GRAGRC+PGIC+ L+S+ R  +
Sbjct: 726  VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 785

Query: 728  LPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEVFLQKTLDPPVFDTIRNAILLLQEIGAL 787
            + +FQ PE+ RMP++ELCL  KLL P NC I  FL K  +PP    +RNA+ +L+ I A+
Sbjct: 786  MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAM 845

Query: 788  SLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSER 847
               E LTELG  L  LPV P   KM++ A+++ CLDP LT+AC   YRDPF LP   S++
Sbjct: 846  DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 905

Query: 848  KKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMR 907
            + A   +    +  G  SD +A++ AF  W+ A+  G E  FC   ++S +TM ++ GMR
Sbjct: 906  RAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 965

Query: 908  RQLEMELVKNGFIPE----GVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAV 967
             QL  +L  +GF+       ++  + N+ +  ++ A LVAG+YP +  +       +  V
Sbjct: 966  TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV-----DRENLV 1025

Query: 968  VEISSGGRVLLHPGSL------------NFELSLRQTDSRPLIVYDEITRGDGGTHIRNC 1027
            +      +V  HP S+            N + +  +      ++YDE+TR     +IR C
Sbjct: 1026 LTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCC 1085

Query: 1028 TVVGPLPLLMVA--KEIAVAPVKENDNGK-DNIKNDDDGNGGADDKMDVDNKSNEQPEEM 1053
            + V P+ +L+      +A   ++E  + + D I ND   +                  EM
Sbjct: 1086 SAVTPVTILVFCGPARLASNALQEPSSFRVDGIPNDSSDS------------------EM 1145

[Close]

BLAST of MS002636 vs. ExPASy Swiss-Prot
Match: Q5R746 (3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-162
Identity = 387/1147 (33.74%), Postives = 601/1147 (52.40%), Query Frame = 0


Query: 8    FEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYK-----SKLQMETMKFSEKTKS 67
            F + L+  ERA +H + + +G+ SKS G G  R ++V K     +   M T   +  TK 
Sbjct: 66   FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNTKH 125

Query: 68   VLDDLFSRYPPDDGELGTTGEQNKKADKQRRKKDDIFFRPSMNKE--EIMKKVESYAARV 127
             +  L  R+P       T  E+ +   K  R   ++F   + N+E  +   ++ +   ++
Sbjct: 126  AVRSLIQRFPV------TNKERTELLPKTER--GNVFAVEAENREMSKTSGRLNNGIPQI 185

Query: 128  ESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWG 187
                   +    R  LP+   Q+ I   ++ + +VVLI GETG GKTTQ+PQFL+D  + 
Sbjct: 186  PVKRGESEFDSFRQSLPVFEKQEEIVKIIKEN-KVVLIVGETGSGKTTQIPQFLLDDCFK 245

Query: 188  KGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGIL 247
             G  C+I CTQPRR++A +V+ER++ ER E +G  +GY+IRLES+    + +  CTNG+L
Sbjct: 246  NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVL 305

Query: 248  LRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRL 307
            LR L+              +  + +S +TH+IVDEVHERDR+SDF+L  LRDLL  +P L
Sbjct: 306  LRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTL 365

Query: 308  RLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDIL--------SVVKSSEENH 367
            +LI+ SA +D   F +YFG CP+I + G  F VK ++LEDIL         ++K  +E  
Sbjct: 366  KLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQ 425

Query: 368  LDE-------------------------NMVGASDE-----------DPELTEEDKFAL- 427
             +E                          ++  +DE             +LTE+D   L 
Sbjct: 426  QEEKQQTTLTEWYSAQENSFKPGSQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCLE 485

Query: 428  -------DEAIHLAWLNEEFDAL-----LELVEDGSSQLLNYQHSVTGLTPLMVFAGKGR 487
                   D  +   WL+++ DA      L L E+ S   ++Y+HS T  T LMV AG+G 
Sbjct: 486  PWLVKEMDACLSDIWLHKDIDAFAQVFHLILTENVS---VDYRHSETSATALMVAAGRGF 545

Query: 488  VSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLES-------------- 547
             S V  L+S GA    +A +G  AL+ AK   Q E  + +  +  S              
Sbjct: 546  ASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQT 605

Query: 548  -STSISKEEQRLIGKY-LAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTR 607
              + +S E++ L+  Y  + +   VD+ LI  L+  IC     GA+L+FLPG+D+I   R
Sbjct: 606  NGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLR 665

Query: 608  ERLSINP--LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDD 667
            +R+  +      +  ++ +  LHS + + +QKKV + PP G RKIILSTNIAET+IT++D
Sbjct: 666  DRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 725

Query: 668  VVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASS 727
            VV+VIDSG +KEKS+D  + V+  +  WISKASA QR+GRAGRC+PGIC+ L+S+ R  +
Sbjct: 726  VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 785

Query: 728  LPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEVFLQKTLDPPVFDTIRNAILLLQEIGAL 787
            + +FQ PE+ RMP++ELCL  KLL P NC +  FL K  +PP    +RNA+ +L+ I A+
Sbjct: 786  MLEFQTPELLRMPLQELCLHTKLLAPVNCPVADFLMKAPEPPPALIVRNAVQMLKTIDAM 845

Query: 788  SLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSER 847
               E LTELG  L  LPV P   KM++ A+++ CLDP LT+AC   YRDPF LP   S++
Sbjct: 846  DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 905

Query: 848  KKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMR 907
            + A   +    +  G  SD +A++ AF  W+ A+  G E  FC   ++S +TM ++ GMR
Sbjct: 906  RAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 965

Query: 908  RQLEMELVKNGFIPE----GVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAV 967
             QL  +L  +GF+       ++  + N+ +  ++ A LVAG+YP +  +       +  V
Sbjct: 966  TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV-----DRENLV 1025

Query: 968  VEISSGGRVLLHPGSL------------NFELSLRQTDSRPLIVYDEITRGDGGTHIRNC 1027
            +      +V  HP S+            N + +  +      ++YDE+TR     +IR C
Sbjct: 1026 LTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCC 1085

Query: 1028 TVVGPLPLLMVA--KEIAVAPVKENDNGK-DNIKNDDDGNGGADDKMDVDNKSNEQPEEM 1053
            + V P+ +L+      +A   ++E  + + D I ND   +                  EM
Sbjct: 1086 SAVTPVTILVFCGPARLASNALQEPSSFRVDGIPNDSSDS------------------EM 1145

[Close]

BLAST of MS002636 vs. ExPASy Swiss-Prot
Match: B2RR83 (3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.4e-162
Identity = 391/1143 (34.21%), Postives = 598/1143 (52.32%), Query Frame = 0


Query: 8    FEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYK-----SKLQMETMKFSEKTKS 67
            F + L+  ERA +H + + +G+ SKS G G  R ++V K     +   M T   +  TK 
Sbjct: 81   FPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNTKH 140

Query: 68   VLDDLFSRYPPDDGELGTTGEQNKKADKQRRKKDDIFFRPSMNKE--EIMKKVESYAARV 127
             +  L  R+P       T  E+ +   K  R   ++F   + N+E  +   ++ +   +V
Sbjct: 141  AVRSLIQRFPV------TNKERTELLPKTER--GNVFAVEAENREMSKTSGRLNNGIPQV 200

Query: 128  ESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWG 187
                   +    R  LP+   Q+ I   ++ + +VVLI GETG GKTTQ+PQFL+D  + 
Sbjct: 201  PVKRGESEFDSFRQSLPVFEKQEEIVKIIKEN-KVVLIVGETGSGKTTQIPQFLLDDCFK 260

Query: 188  KGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGIL 247
             G  C+I CTQPRR++A +V+ER++ ER E +G  +GY+IRLES+    + +  CTNG+L
Sbjct: 261  NGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVL 320

Query: 248  LRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRL 307
            LR L+              +  + +S +TH+IVDEVHERDR+SDF+L  LRDLL  +P L
Sbjct: 321  LRTLM--------------AGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTL 380

Query: 308  RLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDIL--------SVVKSSEENH 367
            +LI+ SA +D   F +YFG CP+I + G  F VK ++LEDIL         ++K  +E  
Sbjct: 381  KLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQ 440

Query: 368  LDENM------------------------VGASDED------------PELTEEDKFAL- 427
             +E                          V +  E+             +LTE+D   L 
Sbjct: 441  REEKQQTTLTEWYSAQENTFKPESQRQRAVASVSEEYDLLDDGGDAVFSQLTEKDVNCLE 500

Query: 428  -------DEAIHLAWLNEEFDAL-----LELVEDGSSQLLNYQHSVTGLTPLMVFAGKGR 487
                   D  +   WL+++ DA      L L E+ S   ++Y+HS T  T LMV AG+G 
Sbjct: 501  PWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVS---VDYRHSETSATALMVAAGRGF 560

Query: 488  VSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLES-------------- 547
             S V  L+S GA    +A +G  AL+ AK   Q E  + +  +  S              
Sbjct: 561  TSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQT 620

Query: 548  -STSISKEEQRLIGKY-LAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTR 607
                +S E++ L+  Y  + +   VD+ LI  L+  IC     GAIL+FLPG+D+I   R
Sbjct: 621  NGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLR 680

Query: 608  ERLSINP--LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDD 667
            +R+  +      +  ++ +  LHS + + +QKKV + PP G RKIILSTNIAET+IT++D
Sbjct: 681  DRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVND 740

Query: 668  VVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASS 727
            VV+VIDSG +KEKS+D  + V+  +  WISKASA QR+GRAGRC+PGIC+ L+S+ R  +
Sbjct: 741  VVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN 800

Query: 728  LPDFQVPEIKRMPIEELCLQVKLLDP-NCRIEVFLQKTLDPPVFDTIRNAILLLQEIGAL 787
            + +FQ PE+ RMP++ELCL  KLL P NC I  FL K  +PP    +RNA+ +L+ I A+
Sbjct: 801  MLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAM 860

Query: 788  SLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSER 847
               E LTELG  L  LPV P   KM++ A+++ CLDP LT+AC   YRDPF LP   S++
Sbjct: 861  DAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK 920

Query: 848  KKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMR 907
            + A   +    +  G  SD +A++ AF  W+ A+  G E  FC   ++S +TM ++ GMR
Sbjct: 921  RAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMR 980

Query: 908  RQLEMELVKNGFIPE----GVKTCSLNACDPGILHAVLVAGLYPMVGRL--------LPP 967
             QL  +L  +GF+       ++  + N+ +  ++ A LVAG+YP +  +         P 
Sbjct: 981  TQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVILTGPK 1040

Query: 968  QKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVG 1027
            +KK +     + S  +    P + N + +  Q      ++YDE+TR     +IR C+ V 
Sbjct: 1041 EKKVRFHPTSVLSQPQYKKIPPA-NGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVT 1100

Query: 1028 PLPLLMV---AKEIAVAPVKENDNGKDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSS 1053
            P+ +L+    A+  + A  + +    D I ND   +                  EM   +
Sbjct: 1101 PVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDS------------------EMEDRT 1160

[Close]

BLAST of MS002636 vs. ExPASy TrEMBL
Match: A0A6J1C5K6 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008173 PE=4 SV=1)

HSP 1 Score: 2131.3 bits (5521), Expect = 0.0e+00
Identity = 1083/1089 (99.45%), Postives = 1086/1089 (99.72%), Query Frame = 0


Query: 175  MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 234
            MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL
Sbjct: 1    MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 60

Query: 235  CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 294
            CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL
Sbjct: 61   CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 120

Query: 295  PSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 354
            PSYP+LRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD
Sbjct: 121  PSYPQLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 180

Query: 355  ENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 414
            ENMVGASDEDPELTEEDKFA DEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP
Sbjct: 181  ENMVGASDEDPELTEEDKFAFDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 240

Query: 415  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 474
            LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS
Sbjct: 241  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 300

Query: 475  KEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 534
            KEEQRLIGKYLAKNSNSVDV+LIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP
Sbjct: 301  KEEQRLIGKYLAKNSNSVDVSLIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 360

Query: 535  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 594
            LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW
Sbjct: 361  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 420

Query: 595  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 654
            MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI
Sbjct: 421  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 480

Query: 655  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 714
            KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG
Sbjct: 481  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 540

Query: 715  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 774
            EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL
Sbjct: 541  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 600

Query: 775  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 834
            ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN
Sbjct: 601  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 660

Query: 835  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 894
            GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG
Sbjct: 661  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 720

Query: 895  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 954
            SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG
Sbjct: 721  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 780

Query: 955  KDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 1014
            KDNIKNDDDGNGGA+DKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL
Sbjct: 781  KDNIKNDDDGNGGAEDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 840

Query: 1015 YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 1074
            YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT
Sbjct: 841  YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 900

Query: 1075 EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLSQNFLPLPDSRTANPS 1134
            EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNG LLNDPLSQNFLPLPDSRTANPS
Sbjct: 901  EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGALLNDPLSQNFLPLPDSRTANPS 960

Query: 1135 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1194
            GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP
Sbjct: 961  GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1020

Query: 1195 VKPSHDQNATH-QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL 1254
            VKPSHDQNATH QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL
Sbjct: 1021 VKPSHDQNATHQQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSL 1080

Query: 1255 KRPRSNGVG 1263
            KRPRSNGVG
Sbjct: 1081 KRPRSNGVG 1089

[Close]

BLAST of MS002636 vs. ExPASy TrEMBL
Match: A0A6J1C7M2 (DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008173 PE=4 SV=1)

HSP 1 Score: 2078.9 bits (5385), Expect = 0.0e+00
Identity = 1058/1064 (99.44%), Postives = 1061/1064 (99.72%), Query Frame = 0


Query: 175  MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 234
            MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL
Sbjct: 1    MDYMWGKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVL 60

Query: 235  CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 294
            CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL
Sbjct: 61   CTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLL 120

Query: 295  PSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 354
            PSYP+LRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD
Sbjct: 121  PSYPQLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLD 180

Query: 355  ENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 414
            ENMVGASDEDPELTEEDKFA DEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP
Sbjct: 181  ENMVGASDEDPELTEEDKFAFDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTP 240

Query: 415  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 474
            LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS
Sbjct: 241  LMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSIS 300

Query: 475  KEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 534
            KEEQRLIGKYLAKNSNSVDV+LIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP
Sbjct: 301  KEEQRLIGKYLAKNSNSVDVSLIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINP 360

Query: 535  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 594
            LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW
Sbjct: 361  LFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGW 420

Query: 595  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 654
            MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI
Sbjct: 421  MKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEI 480

Query: 655  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 714
            KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG
Sbjct: 481  KRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELG 540

Query: 715  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 774
            EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL
Sbjct: 541  EKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAEL 600

Query: 775  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 834
            ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN
Sbjct: 601  ASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKN 660

Query: 835  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 894
            GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG
Sbjct: 661  GFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPG 720

Query: 895  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 954
            SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG
Sbjct: 721  SLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNG 780

Query: 955  KDNIKNDDDGNGGADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 1014
            KDNIKNDDDGNGGA+DKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL
Sbjct: 781  KDNIKNDDDGNGGAEDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQL 840

Query: 1015 YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 1074
            YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT
Sbjct: 841  YCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNAT 900

Query: 1075 EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLSQNFLPLPDSRTANPS 1134
            EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNG LLNDPLSQNFLPLPDSRTANPS
Sbjct: 901  EISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGALLNDPLSQNFLPLPDSRTANPS 960

Query: 1135 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1194
            GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP
Sbjct: 961  GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1020

Query: 1195 VKPSHDQNATH-QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG 1238
            VKPSHDQNATH QQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG
Sbjct: 1021 VKPSHDQNATHQQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNG 1064

[Close]

BLAST of MS002636 vs. ExPASy TrEMBL
Match: A0A6J1FT07 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)

HSP 1 Score: 2058.1 bits (5331), Expect = 0.0e+00
Identity = 1071/1268 (84.46%), Postives = 1141/1268 (89.98%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERALVHE CRKMG+ SKSYG GDQRRVS+YKSK Q +TMKFSEKTKSVL
Sbjct: 39   VFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVL 98

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDGELG  T G+  KK  KQ RKKDDIF+RPSMNKEEIMKKVESY  RV+S
Sbjct: 99   DDLFSSYPPDDGELGRETIGKCKKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKS 158

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            VANLKKIS +RSKLPIASFQDVITSTVESH QVVLISGETGCGKTTQVPQFL+DYMWGKG
Sbjct: 159  VANLKKISGDRSKLPIASFQDVITSTVESH-QVVLISGETGCGKTTQVPQFLLDYMWGKG 218

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            EACKI+CTQPRRISATSVSERIS+ERGENVG+DVGYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 219  EACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLR 278

Query: 245  VLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRL 304
            VLISEGLGKLTTEA EKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLP+YP LRL
Sbjct: 279  VLISEGLGKLTTEASEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRL 338

Query: 305  IIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASD 364
            I+MSATIDA RFS+YFGGCP+I+VPGFTFPVKN YLED+LS+VKSSEENHLD++ VGASD
Sbjct: 339  ILMSATIDAERFSKYFGGCPIISVPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASD 398

Query: 365  EDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGK 424
            E+ ELTEEDK +LDEAIHLAWLN+EFD LLELV  +GSSQ+ NYQHSVTGL+PLMV AGK
Sbjct: 399  EETELTEEDKLSLDEAIHLAWLNDEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGK 458

Query: 425  GRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLI 484
            GRVS+VCMLLSFGAMCEL+AKDGMTALE+A+ G+ KETAEAIRKHLESS S SKEEQRLI
Sbjct: 459  GRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLI 518

Query: 485  GKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 544
            GKYLA+NSNSVDVALI+ L+GKICLDSKEGAILVFLPGWDDISKTRERLSINP+FKDASK
Sbjct: 519  GKYLARNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 578

Query: 545  FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 604
            FLII LHSMVPSKEQKKVF+RPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD
Sbjct: 579  FLIISLHSMVPSKEQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 638

Query: 605  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 664
            PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE
Sbjct: 639  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 698

Query: 665  LCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLP 724
            LCLQVKLLDPNCRIE FLQKTLDPPVFDTIRNAIL+LQ+IGALSLDEKLTELGEKLGSLP
Sbjct: 699  LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLP 758

Query: 725  VHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGH 784
            VHPVTSKMLIFAILMNCL+PALTLACASDY+DPFTLPM PSERKKAAAAKAELASLYGGH
Sbjct: 759  VHPVTSKMLIFAILMNCLEPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 818

Query: 785  SDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGV 844
            SDQLA+VAAFDCWKNAK RGQEARFCS Y++SPSTMSML GMRRQLEMELV+NGFIPE +
Sbjct: 819  SDQLAVVAAFDCWKNAKRRGQEARFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 878

Query: 845  KTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELS 904
             TCSLNA DPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVE  SGGRVLLH  SLNFELS
Sbjct: 879  STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 938

Query: 905  LRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKND 964
             + TD+ PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAP KENDNGK +I ND
Sbjct: 939  HKLTDNCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVND 998

Query: 965  DDGNGGA------DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1024
              GN  A      +DKMD++NKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY
Sbjct: 999  TYGNDEAGVVETVEDKMDIENKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1058

Query: 1025 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATE 1084
            CLRERLSAAILFKVKHPNK+LPPVLGASMHALACILSYDGLTGI LESVEMLT+MV+ATE
Sbjct: 1059 CLRERLSAAILFKVKHPNKILPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATE 1118

Query: 1085 ISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTL-LNDPLSQNFLPLPDSRTANPS 1144
            ISNFVPGRS  THK VS F RSLS+Y DFTVPE +GT  LN P SQNFLP PD R ANPS
Sbjct: 1119 ISNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPS 1178

Query: 1145 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1204
             P SPNFRA PNSVYARS LQPHR QK            PQ  KP Q QNATQQ+  P  
Sbjct: 1179 DPSSPNFRAFPNSVYARSTLQPHRGQKH-----------PQPAKPFQDQNATQQQHAP-- 1238

Query: 1205 VKPSHDQNATHQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSLK 1263
                  ++ T +Q++   + +  ++Q+    +KPPSG+ SLNGYGLS YGPYG RG+SLK
Sbjct: 1239 ------EHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLNGYGLSTYGPYGLRGISLK 1286

[Close]

BLAST of MS002636 vs. ExPASy TrEMBL
Match: A0A6J1INX6 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478616 PE=4 SV=1)

HSP 1 Score: 2049.6 bits (5309), Expect = 0.0e+00
Identity = 1066/1268 (84.07%), Postives = 1141/1268 (89.98%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERALVHE CRKMG+ SKSYG GDQRRVS+YKSK Q +TMKFSEKTKSVL
Sbjct: 39   VFTFEADLSKRERALVHEECRKMGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVL 98

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDGELG  T G+  KKA KQ R+KDDIF+RPSMNKEEIMKKVESY  RV+S
Sbjct: 99   DDLFSSYPPDDGELGKETIGKCKKKAHKQSRRKDDIFWRPSMNKEEIMKKVESYTTRVKS 158

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            +AN+KKIS +RSKLPIASFQDVITSTVESH QVVLISGETGCGKTTQVPQFL+DYMWGKG
Sbjct: 159  IANMKKISGDRSKLPIASFQDVITSTVESH-QVVLISGETGCGKTTQVPQFLLDYMWGKG 218

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            EACKI+CTQPRRISATSVSERIS+ERGENVG+DVGYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 219  EACKIICTQPRRISATSVSERISYERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLR 278

Query: 245  VLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRL 304
            VLISEGLGKLT +A EKSRKNVVSDLTHIIVDEVHERDR+SDFILAILRDLLP+YP LRL
Sbjct: 279  VLISEGLGKLTMDASEKSRKNVVSDLTHIIVDEVHERDRFSDFILAILRDLLPTYPHLRL 338

Query: 305  IIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASD 364
            I+MSATIDA RFS+YFGGCP+I+VPGFTFPVKNLYLED+LS+VKSSEENHLD++ VGASD
Sbjct: 339  ILMSATIDAERFSKYFGGCPIISVPGFTFPVKNLYLEDVLSIVKSSEENHLDDSTVGASD 398

Query: 365  EDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGK 424
            E+ ELTEEDK +LDEAIHLAWLNEEFD LLELV  +GSSQ+ NYQHS+TGL+PLMV AGK
Sbjct: 399  EETELTEEDKLSLDEAIHLAWLNEEFDPLLELVASEGSSQIYNYQHSLTGLSPLMVLAGK 458

Query: 425  GRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLI 484
            GRVS+VCMLLSFGAMCEL+AKDGMTALE+A+ G+ KETAEAIRKHLESS S SKEEQRLI
Sbjct: 459  GRVSDVCMLLSFGAMCELQAKDGMTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLI 518

Query: 485  GKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 544
            GKYLAKNSNSVDVALI+ L+GKICLDSKEGAILVFLPGWDDISKTRERLSINP+FKDASK
Sbjct: 519  GKYLAKNSNSVDVALIDLLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASK 578

Query: 545  FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 604
            FLII LHSMVPSKEQKKVF+RPP GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD
Sbjct: 579  FLIISLHSMVPSKEQKKVFKRPPSGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 638

Query: 605  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 664
            PY NVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSK RASSLPDFQVPEIKRMPIEE
Sbjct: 639  PYRNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKVRASSLPDFQVPEIKRMPIEE 698

Query: 665  LCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLP 724
            LCLQVKLLDPNCRIE FLQKTLDPPVFDTIRNAIL+LQ+IGALSLDEKLTELGEKLGSLP
Sbjct: 699  LCLQVKLLDPNCRIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLP 758

Query: 725  VHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGH 784
            VHPVTSKMLIFAILMNCLDPALTLACASDY+DPFTLPM PSERKKAAAAKAELASLYGGH
Sbjct: 759  VHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 818

Query: 785  SDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGV 844
            SDQLA+VAAF+CWKNAK RGQEARFCSNY++SPSTMSML GMRRQLEMELV+NGFIPE +
Sbjct: 819  SDQLAVVAAFNCWKNAKRRGQEARFCSNYHISPSTMSMLFGMRRQLEMELVQNGFIPEDI 878

Query: 845  KTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELS 904
             TCSLNA DPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVE  SGGRVLLH  SLNFELS
Sbjct: 879  STCSLNARDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELS 938

Query: 905  LRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKND 964
             + TD+ PLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAP KENDNGK +I ND
Sbjct: 939  HKLTDNCPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVND 998

Query: 965  DDGNGGA------DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1024
             DGN  A      +DKMD++N+SNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY
Sbjct: 999  TDGNDEAGVVETVEDKMDIENRSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1058

Query: 1025 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATE 1084
            CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGI LESVEMLT+MV+ATE
Sbjct: 1059 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGISLESVEMLTTMVDATE 1118

Query: 1085 ISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGTL-LNDPLSQNFLPLPDSRTANPS 1144
            ISNFVPGRS  THK VS F RSLS+Y DFTVPE +GT  LN P SQNFLP  D R ANPS
Sbjct: 1119 ISNFVPGRSNETHKKVSSFHRSLSNYNDFTVPESSGTSNLNHPFSQNFLPPADFRAANPS 1178

Query: 1145 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1204
             P SPNFRA PNSVYARS LQPHR+Q+            PQ  KP Q QNATQQ+  P  
Sbjct: 1179 DPSSPNFRAFPNSVYARSTLQPHREQEH-----------PQPAKPFQDQNATQQQHAP-- 1238

Query: 1205 VKPSHDQNATHQQQQQHAQERTPRKQRKSHKKKPPSGDLSLNGYGLSMYGPYGPRGVSLK 1263
                  ++ T +Q++   + +  ++Q+    +KPPSGD SLNGYGLS YGPYG RG+SLK
Sbjct: 1239 ------EHKTRKQRKSRRERKAAQQQKHPQLQKPPSGDPSLNGYGLSTYGPYGLRGISLK 1286

[Close]

BLAST of MS002636 vs. ExPASy TrEMBL
Match: A0A1S3BTJ2 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493002 PE=4 SV=1)

HSP 1 Score: 1997.2 bits (5173), Expect = 0.0e+00
Identity = 1047/1271 (82.38%), Postives = 1121/1271 (88.20%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKSKLQMETMKFSEKTKSVL 64
            VFTFEADLSKRERA VH+VCRKMGM SKS GHGDQRRVSVYKSKLQMETMKFSEKTK+VL
Sbjct: 40   VFTFEADLSKRERAFVHDVCRKMGMKSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVL 99

Query: 65   DDLFSRYPPDDGELG--TTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVES 124
            DDLFS YPPDDGELG  T G  N KADKQRRKKDDIF+RPS  KEE+MKK+ SY   ++S
Sbjct: 100  DDLFSMYPPDDGELGKETVGNHNIKADKQRRKKDDIFWRPSTTKEELMKKLGSYT--MKS 159

Query: 125  VANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMWGKG 184
            VAN+KKISEERSKLPIASFQDVITSTVESH QVVLI GETGCGKTTQVPQFL+DYMWGKG
Sbjct: 160  VANMKKISEERSKLPIASFQDVITSTVESH-QVVLICGETGCGKTTQVPQFLLDYMWGKG 219

Query: 185  EACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLR 244
            E CKIVCTQPRRISA SVSERIS+ERGENVG+D+GYKIRLESKGGRHSSIVLCTNGILLR
Sbjct: 220  ETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLR 279

Query: 245  VLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRL 304
            VLISEGLGKLT EA  KS KNV SDLTHIIVDEVHERDRYSDFIL ILRDLLPSYP LRL
Sbjct: 280  VLISEGLGKLTMEASRKSWKNVASDLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRL 339

Query: 305  IIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASD 364
            I+MSATIDA RFS+YFGGCP+INVPGFT+PVK+ YLEDILS++KSSEENHLD+  VG SD
Sbjct: 340  ILMSATIDAERFSKYFGGCPIINVPGFTYPVKSFYLEDILSILKSSEENHLDDT-VGVSD 399

Query: 365  EDPELTEEDKFALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGK 424
             +PELTEED  ALDE+I +AWLN+EFD LLE V   GSSQ+ NYQHSVTGLTPLMV AGK
Sbjct: 400  GEPELTEEDILALDESIEMAWLNDEFDPLLEFVASGGSSQIFNYQHSVTGLTPLMVLAGK 459

Query: 425  GRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLI 484
            GRVS+VCMLLSFGAMCEL+AKDG TALELA+ GDQKETAEAIRKHLE+STS SKEE+RLI
Sbjct: 460  GRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLETSTSNSKEERRLI 519

Query: 485  GKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 544
            G YLAKNSNSVDV L+EQL+GKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK
Sbjct: 520  GAYLAKNSNSVDVRLLEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASK 579

Query: 545  FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 604
            FLII LHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD
Sbjct: 580  FLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 639

Query: 605  PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 664
            PYSN+STFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE
Sbjct: 640  PYSNISTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 699

Query: 665  LCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLP 724
            LCLQVKLLDPNC+IE FLQKTLDPPVFDTIRNAIL+LQ+IGALSLDEKLTELG+KLGSLP
Sbjct: 700  LCLQVKLLDPNCKIEGFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLP 759

Query: 725  VHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGH 784
            VHPVTSKMLIFAILMNCLDPALTLACA DY+DPFTLPM PSERKKAAAAKAELASLYGGH
Sbjct: 760  VHPVTSKMLIFAILMNCLDPALTLACALDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 819

Query: 785  SDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGV 844
            SDQLA+VAAFDCWKNAK RGQ ARFCS YY+S STM+ML GMRRQLEMELV+NGFIPE V
Sbjct: 820  SDQLAVVAAFDCWKNAKGRGQ-ARFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDV 879

Query: 845  KTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELS 904
             TC+LNACDPGILH VLVAGLYP VGRLLPPQK+GKRAVVE  SG RVLLH  SLNFELS
Sbjct: 880  STCNLNACDPGILHTVLVAGLYPKVGRLLPPQKRGKRAVVETCSGSRVLLHRHSLNFELS 939

Query: 905  LRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKND 964
            L+QTD+ PLIVYDE+TRGDGGTHIRNCTVVGPLPLLMVAK+IAVAP K +DN K   +N+
Sbjct: 940  LKQTDNHPLIVYDEVTRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKMSDNCKGGTENN 999

Query: 965  DDGNG------GADDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLY 1024
            ++GN        A +KMD++NKSN+QPEEMIMSSPDN+VTVVVDRWL FWSKALDIAQLY
Sbjct: 1000 NNGNDEAGIDETAQEKMDIENKSNQQPEEMIMSSPDNAVTVVVDRWLQFWSKALDIAQLY 1059

Query: 1025 CLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYDGLTGIPLESVEMLTSMVNATE 1084
            CLRERLS+AILFKVKHPN VLPPVLGASMHALACILSYDGL+GI LESVEMLTSMVNATE
Sbjct: 1060 CLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESVEMLTSMVNATE 1119

Query: 1085 ISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPEVNGT-LLNDPLSQNFLPLPDSRTANPS 1144
            I  F PG+SVGTHK VSWF +   +Y DF+VPE NGT +LNDPLSQN LP PD RTANPS
Sbjct: 1120 IGQFAPGKSVGTHKKVSWFHKLHPNYNDFSVPEANGTSILNDPLSQNLLPTPDFRTANPS 1179

Query: 1145 GPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQP 1204
             P SP  RASPNS YARSA Q  R+ K           P +  KPS+ Q+A QQ+Q  Q 
Sbjct: 1180 DPSSPYVRASPNSAYARSAPQSQREHK-----------PFKLGKPSRDQDAAQQQQQEQ- 1239

Query: 1205 VKPSHDQNATHQQQQQHAQERTPRKQRKSHK-------KKPPSGDLSLNGYGLSMYGPYG 1259
                  +    QQQQQHAQE   RKQR SHK       +KPPSGDLSLNGYGL+ YGPYG
Sbjct: 1240 -----QEQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKPPSGDLSLNGYGLNTYGPYG 1288

[Close]

BLAST of MS002636 vs. TAIR 10
Match: AT2G30800.1 (helicase in vascular tissue and tapetum )

HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 710/1278 (55.56%), Postives = 904/1278 (70.74%), Query Frame = 0


Query: 5    VFTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYKS---------------KL 64
            V+TFE +LS  ER ++H++CRKMG+ SKS G G+QRR+S++KS               K 
Sbjct: 39   VYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKE 98

Query: 65   QMETMKFSEKTKSVLDDLFSRYPPDDGELGTTG--EQNKKADKQRRKKDDIFFRPSMNKE 124
            +++ + F      +L +LF+ YPP DG+   T   + +    KQ + KDD F +P ++ E
Sbjct: 99   KLKCVSFPPGADVILQELFTHYPPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSE 158

Query: 125  EIMKKVESYAARVESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKT 184
            EI++KV S ++R++    LK+I++ RSKLPI SF+D ITS VES+ QV+LISGETGCGKT
Sbjct: 159  EILEKVASLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESN-QVILISGETGCGKT 218

Query: 185  TQVPQFLMDYMW-GKGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKG 244
            TQVPQ+L+D+MW  K E CKIVCTQPRRISA SVSERIS ERGE++G ++GYK+RL+SKG
Sbjct: 219  TQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKG 278

Query: 245  GRHSSIVLCTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFI 304
            GRHSS+V CTNGILLRVL+ +G              + VSD+THIIVDE+HERD YSDF+
Sbjct: 279  GRHSSVVFCTNGILLRVLVGKG------------SVSSVSDITHIIVDEIHERDCYSDFM 338

Query: 305  LAILRDLLPSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVK 364
            LAI+RDLLPS P LRLI+MSAT+DA RFS YFGGCP++ VPGFT+PV+ LYLED+LS++K
Sbjct: 339  LAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILK 398

Query: 365  SSEENHLDENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVED-GSSQLLNY 424
            S  +NHL    +  SD   +LT+EDK ALDEAI LAW N+EFDALL+LV   GS ++ NY
Sbjct: 399  SGGDNHLSSTNLSISDHKLDLTDEDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNY 458

Query: 425  QHSVTGLTPLMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRK 484
            QH  T LTPLMVFAGKGR+S+VCMLLSFGA   L++KDGMTALELA+  +Q E A+ IR+
Sbjct: 459  QHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIRE 518

Query: 485  HLESSTSISKEEQRLIGKYLAK-NSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDIS 544
            H ++S S S++ Q+L+ KY+A  N   VDV+LI+QL+ KIC DS++GAILVFLPGWDDI+
Sbjct: 519  HADNSQSNSQQGQQLLDKYMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDIN 578

Query: 545  KTRERLSINPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITID 604
            KTR+RL  NP F D++KF IICLHSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TID
Sbjct: 579  KTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTID 638

Query: 605  DVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRAS 664
            DVVYVIDSG MKEKSYDPY+NVST QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+
Sbjct: 639  DVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAA 698

Query: 665  SLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGAL 724
            S+PDF+VPEIKRMP+EELCLQVK+LDPNC+   FLQK LDPPV  +I NA+ +LQ+IGAL
Sbjct: 699  SMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGAL 758

Query: 725  SLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSER 784
            +  E+LTELGEK G LPVHP+ SKML FA+L+NCLDPALTLACA+DY++PFT+PMSP ER
Sbjct: 759  TPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVER 818

Query: 785  KKAAAAKAELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMR 844
            +KAAAAK ELASL GG SD LA+VAAF+CWKNAK RG  A FCS Y+VSPS M ML  MR
Sbjct: 819  QKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMR 878

Query: 845  RQLEMELVKNGFIPEGVKTCSLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEIS 904
             QLE EL ++G IP  + +CS N+ DPGIL AVL  GLYPMVGRL P     +R +VE +
Sbjct: 879  SQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETA 938

Query: 905  SGGRVLLHPGSLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIA 964
            SG +V +H  S NF LS ++ D   L+V+DEITRGDGG HIRNCTV   LPLL+++ EIA
Sbjct: 939  SGAKVRVHSLSNNFNLSSKKYD-ESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIA 998

Query: 965  VAPVKENDNGKDNIKNDDDGNGGADDKMDVDNKSNEQPEEM----------IMSSPDNSV 1024
            VAP   +D+   N + +DD    A+   +V   +NE+  ++          +MSSP+NSV
Sbjct: 999  VAPTGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEGMDIHKEESRRGAKMMSSPENSV 1058

Query: 1025 TVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKVLPPVLGASMHALACILSYD 1084
             +VVDRWL F + AL++AQ+Y LRERL A+ILFKV HP + LPP LGASMHA+A ILSYD
Sbjct: 1059 KLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYD 1118

Query: 1085 GLTGIPLESVEMLTSMVNATEISNFVPGRSVGTHKTVSWFLRSLSSYTDFTVPE---VNG 1144
            G  G+     E +    + TE+ +     + G  +  + FL SL  +   ++ E    + 
Sbjct: 1119 GHAGLSCPP-ESMVPKHSRTEMYD-----TGGWEEKPNSFLNSL--FWSLSLKENKHPSH 1178

Query: 1145 TLLNDPLSQNFLPLPDSRTANPSGPLSPNFRASPNSVYARSALQPHRKQKQPPHPHREQK 1204
            T  N   + N  P     T   S P   N++   N     +     +K+K   +P     
Sbjct: 1179 TNRNQQHNYNMAP-----TEAASIPRQQNYK-QRNPKATNNTDSGKKKEKMFVNPTNRIN 1238

Query: 1205 QPPQAV--KPSQHQNATQQKQPPQPVKPSHDQNATHQQQQQHAQERTP--RKQRKSHKKK 1246
            QP  A   KPS+H++A       +      DQ   ++Q     +E      K + S K K
Sbjct: 1239 QPEAASTGKPSKHKSANSSGSSNKKENMPSDQAYGNKQHNTVPREAAAPMAKNQSSKKTK 1288

[Close]

BLAST of MS002636 vs. TAIR 10
Match: AT1G06670.1 (nuclear DEIH-boxhelicase )

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 647/1294 (50.00%), Postives = 857/1294 (66.23%), Query Frame = 0


Query: 6    FTFEADLSKRERALVHEVCRKMGMASKSYGHGDQRRVSVYK------------------- 65
            + FE  L+  ER ++H++CR MG+ SKS G G++RR+S++K                   
Sbjct: 36   YVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQK 95

Query: 66   -----------SKLQMET--------------------MKFSEKTKSVLDDLFSRYPPDD 125
                       SK + ET                    + F  + K+VL DLF+RYPP D
Sbjct: 96   EKEGDGISKSYSKHRYETRFQKAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCD 155

Query: 126  GE-LGTTGEQNKKADKQRRKKDDIFFRPSMNKEEIMKKVESYAARVESVANLKKISEERS 185
            G+  GT+       +     KDD F +P M K +I   V S ++R++   + ++I E RS
Sbjct: 156  GDTTGTSLGIYTTGNVNSNWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARS 215

Query: 186  KLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLMDYMW-GKGEACKIVCTQPR 245
            KLPIASF+D I S VES+ QVVLI+GETGCGKTTQVPQ+L+D+MW  K EACKI+CTQPR
Sbjct: 216  KLPIASFRDAIISAVESN-QVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPR 275

Query: 246  RISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLT 305
            RISA SVS+RIS ERGE +G  VGYK+RL+S+GGR SS+V CTNGILLRVLI +G+    
Sbjct: 276  RISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGV---- 335

Query: 306  TEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRLIIMSATIDAGR 365
                     + V D+THIIVDE+HERD YSDF+L ILRDLLPS P LRLI+MSAT+DA R
Sbjct: 336  --------NSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAER 395

Query: 366  FSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEENHLDENMVGASDEDPELTEEDKF 425
            FS+YFGGCP++ VPGFT+PV+  +L+D LSV+ S + +HL       S    +  +EDK 
Sbjct: 396  FSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHL------LSAVKRDFKDEDKV 455

Query: 426  ALDEAIHLAWLNEEFDALLELV-EDGSSQLLNYQHSVTGLTPLMVFAGKGRVSNVCMLLS 485
            +LDEAI LAW N+EFD L++LV  +GS +  NYQ+S TGLTPLMVFAGKGRVS+VC LLS
Sbjct: 456  SLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLS 515

Query: 486  FGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLIGKYLAK-NSNS 545
             GA C L++K+G+TALELA+  +Q ETA+ IR+H  +  S S++ Q L+ KY+A      
Sbjct: 516  VGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEE 575

Query: 546  VDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIICLHSMV 605
            VDV LI +L+ KIC DSK+GAILVFLPGW++ISKT+E+L  +  F  ++KF+I+CLHS V
Sbjct: 576  VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRV 635

Query: 606  PSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQS 665
            P++EQKKVF RPP GCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY++VST QS
Sbjct: 636  PAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQS 695

Query: 666  SWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP 725
            SW+SKA+AKQR GRAGRCQ GICYHLYSK RA+SLP+++VPE+ RMP++ELCLQVK+LDP
Sbjct: 696  SWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDP 755

Query: 726  NCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLPVHPVTSKMLI 785
            NC +  FLQK +DPPV  +I NA+++L++IGAL+ +E+LTELG+K G LPVHP  SKM+ 
Sbjct: 756  NCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIY 815

Query: 786  FAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGGHSDQLAIVAAF 845
            FAIL+NCLDPAL LACA+D +DPFT+P+SP +RKKAAAAK ELASLYG HSD LA VAAF
Sbjct: 816  FAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAF 875

Query: 846  DCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGVKTCSLNACDP 905
             CWKNAK  GQ   FCS Y++S   M  L  + R+L+ EL ++G IP     CSLNA DP
Sbjct: 876  QCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDP 935

Query: 906  GILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTDSRPLI 965
            GIL AV+  GLYPM+GR+ P  K   R+V+E  +G +V +   S N ++S  + D   LI
Sbjct: 936  GILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFD-EALI 995

Query: 966  VYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIAVAPVKENDNGKDNIKNDDDGN---GGA 1025
            V+DEITRGD G  IR+CTV+  +P+L+ ++EIAV+  +      D +K+DD+ +   G  
Sbjct: 996  VFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTE----SYDAVKSDDEEDHKVGNV 1055

Query: 1026 DDKMDVDNKSNEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFK 1085
             D MD+D K   +P E IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL A+ILFK
Sbjct: 1056 GDAMDID-KEVGRPGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFK 1115

Query: 1086 VKHPNKVLPPVLGASMHALACILSYDGL--TGIPLESVEMLTSMVNATEISNFVPGRSVG 1145
            VKHP + LPP LGASM+A+A +LSYD L  + +   +V+ +TS+V+AT   + +P     
Sbjct: 1116 VKHPKENLPPHLGASMYAIASVLSYDSLAQSSVQTVAVQPITSVVDATSPRDDIPS---- 1175

Query: 1146 THKTVSWFLRSLSSYTDFTVPEVNGTLLNDPLS-QNFLPLPDSRTANPSGPLSPNFRASP 1205
                        ++  +    + N T +   L   N L L +   + PS     N +  P
Sbjct: 1176 ------------TNPNELREHDPNTTPMGSKLELANKLGLGNMEESLPSNFADGNEQPDP 1235

Query: 1206 NSVYARSALQPHRKQKQPPHPHREQKQPPQAVKPSQHQNATQQKQPPQPVKPSHDQ---N 1237
            N+          +++K      R +      +   +      ++ PP  +   ++Q    
Sbjct: 1236 NTSPVEDVSAATKQKKMQSESKRCKSLNNVDLGNIEENFGNMEENPPSDLAIGNEQTLPK 1288

[Close]

BLAST of MS002636 vs. TAIR 10
Match: AT2G35920.1 (RNA helicase family protein )

HSP 1 Score: 508.8 bits (1309), Expect = 1.2e-143
Identity = 347/948 (36.60%), Postives = 508/948 (53.59%), Query Frame = 0


Query: 11  DLSKRERALVHEVCRKMGMASKSYGHGDQRRVSV-----YKSKLQ------METMKFSEK 70
           + S+ ++  + ++  +MG+   +Y  G    VS      Y++ L        + +K S +
Sbjct: 87  NFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTE 146

Query: 71  TKSVLDDLFSRYPPDDGELGTTG-----EQNKKADKQRRKKDDIFFRP-SMNKEEIMKKV 130
           T+  L  L  +   + G  G +      +Q++ +    ++ D     P S+ KE+    +
Sbjct: 147 TERKLGSLL-KTTQESGSSGASASAFNDQQDRTSTLGLKRPDSASKLPDSLEKEKFSFAL 206

Query: 131 ESYAARVESVANLKKISEERSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQF 190
           +    ++++  ++K +   R KLP    ++   ++V S  QV+++SGETGCGKTTQ+PQF
Sbjct: 207 KERQEKLKATESVKALKAFREKLPAFKMKEEFLNSV-SQNQVLVVSGETGCGKTTQLPQF 266

Query: 191 LMDYMWG--KGEACKIVCTQPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSS 250
           +++      +G  C I+CTQPRRISA SV+ RIS ERGE++G  VGY+IRLESK    + 
Sbjct: 267 ILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTR 326

Query: 251 IVLCTNGILLRVLISEGLGKLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILR 310
           ++ CT G+LLR LI         E P       +++++H++VDE+HER    DF+L ILR
Sbjct: 327 LLFCTTGVLLRRLI---------EDPN------LTNVSHLLVDEIHERGMNEDFLLIILR 386

Query: 311 DLLPSYPRLRLIIMSATIDAGRFSQYFGGCPMINVPGFTFPVKNLYLEDILSVVKSSEEN 370
           DLLP  P LRLI+MSATI+A  FS YFG  P +++PGFTFPV  L+LED+L         
Sbjct: 387 DLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVL--------- 446

Query: 371 HLDENMVGASDEDPELTEEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTG 430
                            E+ ++ +                       SS   NYQ S   
Sbjct: 447 -----------------EKSRYNIK----------------------SSDSGNYQGS--- 506

Query: 431 LTPLMVFAGKGRVSNVCMLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESST 490
                   G+ R S                KD +T L         E  + I  H +S +
Sbjct: 507 ------SRGRRRESE-------------SKKDDLTTL--------FEDID-INSHYKSYS 566

Query: 491 SISKEEQRLIGKYLAKNSNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLS 550
           S ++          A +   +DV L+E  I  IC     GAILVFL GWD+ISK  E+++
Sbjct: 567 SATRNSLE------AWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKIN 626

Query: 551 INPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVID 610
           +N    D+SKFL++ LH  +P+  Q+++F RPPP  RKI+L+TNIAE++ITIDDVVYV+D
Sbjct: 627 MNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVD 686

Query: 611 SGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQV 670
            G  KE SYD  + V+    SWISKASA QR GRAGR Q G+CY LY K    + P +Q+
Sbjct: 687 CGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQL 746

Query: 671 PEIKRMPIEELCLQVKLLDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLT 730
           PEI R P++ELCL +K L     I  FL K L PP    + NAI LL+ IGAL+  E+LT
Sbjct: 747 PEIIRTPLQELCLHIKSLQVG-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELT 806

Query: 731 ELGEKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAK 790
            LG  L +LPV P   KML+   +  C++PALT+A A  YR PF LP+  + +++A  AK
Sbjct: 807 PLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAK 866

Query: 791 AELASLYGGHSDQLAIVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMEL 850
              A      SD +A++ A++ +++AK  G E  FC   ++SP T+ M+  MR Q    L
Sbjct: 867 RYFAG--DSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLL 920

Query: 851 VKNGFIPEGVKTC-SLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVL 910
              GF+ +      +  + D  ++ AVL AGLYP V   +  +++GKR        G+V 
Sbjct: 927 SDIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNV---VQCKRRGKRTAFYTKELGKVD 920

Query: 911 LHPGSLNFELSLRQTDSRPLIVYDEITRGDGGTHIRNCTVVGPLPLLM 939
           +HPGS+N  ++L    S P +VY E  +     +IR+ T +    LLM
Sbjct: 987 IHPGSVNARVNL---FSLPYLVYSEKVK-TTSVYIRDSTNISDYALLM 920

[Close]

BLAST of MS002636 vs. TAIR 10
Match: AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-129
Identity = 287/818 (35.09%), Postives = 435/818 (53.18%), Query Frame = 0


Query: 133 RSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLM--DYMWGKGEACKIVCT 192
           R  LP    +D +   + ++ QVV++SGETGCGKTTQ+PQ+++  +    +G  C I+CT
Sbjct: 296 RKTLPAYKEKDALLKAIAAN-QVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICT 355

Query: 193 QPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLG 252
           QPRRISA SVSER++ ERGE +G  VGYK+RLE   GR + ++ CT G+LLR L+     
Sbjct: 356 QPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL----- 415

Query: 253 KLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRLIIMSATID 312
                  ++S K V    TH++VDE+HER    DF+L +L+DLLP  P L+LI+MSAT++
Sbjct: 416 ------VDRSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 475

Query: 313 AGRFSQYFGGCPMINVPGFTFPVKNLYLEDIL--SVVKSSEENHLDENMVGASDEDPELT 372
           A  FS YFGG P +++PGFT+PV+  +LED L  S  + +  N +D           +  
Sbjct: 476 AELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQID-----------DYG 535

Query: 373 EEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTPLMVFAGKGRVSNVC 432
           EE  + + +         +F     L+                                 
Sbjct: 536 EEKTWKMQK-------QAQFKKRKSLIS-------------------------------- 595

Query: 433 MLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLIGKYLAKN 492
                            +A+E     D  E A+    +  +  S+S             +
Sbjct: 596 -----------------SAVE-----DALEAADFKGYNFRTRDSLS-----------CWS 655

Query: 493 SNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIICLH 552
            +S+   LIE ++  I    + GA+LVF+ GWDDI+  + +L  + L  D +K L++  H
Sbjct: 656 PDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACH 715

Query: 553 SMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVST 612
             + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G  KE SYD  +N   
Sbjct: 716 GSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPC 775

Query: 613 FQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKL 672
              SWISKA+A+QR GRAGR  PG CYHLY +    +  D+Q PE+ R P++ LCLQ+K 
Sbjct: 776 LLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKS 835

Query: 673 LDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLPVHPVTSK 732
           L     I  FL + L PP   +++NA+  L+ IGAL  DE LT LG+ L  LPV P   K
Sbjct: 836 LGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGK 895

Query: 733 MLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGG--HSDQLA 792
           MLI   + NCLDP +T+      RDPF +P    +  + A +K      + G  +SD L 
Sbjct: 896 MLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSK------FSGRDYSDHLT 955

Query: 793 IVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGVKTCSL 852
           +V A++ WK+A+       +C   ++S  T+  +  MR+Q    L+K   + + ++ CS 
Sbjct: 956 LVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEGCSK 999

Query: 853 NACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTD 912
            + D  ++ A++ AG++P V  ++    K K   ++    G+VLL+  S+N  + +    
Sbjct: 1016 LSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVNGNVPMIPF- 999

Query: 913 SRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIA 945
             P +V+++  + +    +R+ T V    LL+   +I+
Sbjct: 1076 --PWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999

[Close]

BLAST of MS002636 vs. TAIR 10
Match: AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-129
Identity = 287/818 (35.09%), Postives = 435/818 (53.18%), Query Frame = 0


Query: 133 RSKLPIASFQDVITSTVESHQQVVLISGETGCGKTTQVPQFLM--DYMWGKGEACKIVCT 192
           R  LP    +D +   + ++ QVV++SGETGCGKTTQ+PQ+++  +    +G  C I+CT
Sbjct: 296 RKTLPAYKEKDALLKAIAAN-QVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICT 355

Query: 193 QPRRISATSVSERISHERGENVGTDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLG 252
           QPRRISA SVSER++ ERGE +G  VGYK+RLE   GR + ++ CT G+LLR L+     
Sbjct: 356 QPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL----- 415

Query: 253 KLTTEAPEKSRKNVVSDLTHIIVDEVHERDRYSDFILAILRDLLPSYPRLRLIIMSATID 312
                  ++S K V    TH++VDE+HER    DF+L +L+DLLP  P L+LI+MSAT++
Sbjct: 416 ------VDRSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 475

Query: 313 AGRFSQYFGGCPMINVPGFTFPVKNLYLEDIL--SVVKSSEENHLDENMVGASDEDPELT 372
           A  FS YFGG P +++PGFT+PV+  +LED L  S  + +  N +D           +  
Sbjct: 476 AELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQID-----------DYG 535

Query: 373 EEDKFALDEAIHLAWLNEEFDALLELVEDGSSQLLNYQHSVTGLTPLMVFAGKGRVSNVC 432
           EE  + + +         +F     L+                                 
Sbjct: 536 EEKTWKMQK-------QAQFKKRKSLIS-------------------------------- 595

Query: 433 MLLSFGAMCELRAKDGMTALELAKLGDQKETAEAIRKHLESSTSISKEEQRLIGKYLAKN 492
                            +A+E     D  E A+    +  +  S+S             +
Sbjct: 596 -----------------SAVE-----DALEAADFKGYNFRTRDSLS-----------CWS 655

Query: 493 SNSVDVALIEQLIGKICLDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIICLH 552
            +S+   LIE ++  I    + GA+LVF+ GWDDI+  + +L  + L  D +K L++  H
Sbjct: 656 PDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACH 715

Query: 553 SMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVST 612
             + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G  KE SYD  +N   
Sbjct: 716 GSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPC 775

Query: 613 FQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKL 672
              SWISKA+A+QR GRAGR  PG CYHLY +    +  D+Q PE+ R P++ LCLQ+K 
Sbjct: 776 LLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKS 835

Query: 673 LDPNCRIEVFLQKTLDPPVFDTIRNAILLLQEIGALSLDEKLTELGEKLGSLPVHPVTSK 732
           L     I  FL + L PP   +++NA+  L+ IGAL  DE LT LG+ L  LPV P   K
Sbjct: 836 LGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGK 895

Query: 733 MLIFAILMNCLDPALTLACASDYRDPFTLPMSPSERKKAAAAKAELASLYGG--HSDQLA 792
           MLI   + NCLDP +T+      RDPF +P    +  + A +K      + G  +SD L 
Sbjct: 896 MLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSK------FSGRDYSDHLT 955

Query: 793 IVAAFDCWKNAKERGQEARFCSNYYVSPSTMSMLCGMRRQLEMELVKNGFIPEGVKTCSL 852
           +V A++ WK+A+       +C   ++S  T+  +  MR+Q    L+K   + + ++ CS 
Sbjct: 956 LVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNIEGCSK 999

Query: 853 NACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVEISSGGRVLLHPGSLNFELSLRQTD 912
            + D  ++ A++ AG++P V  ++    K K   ++    G+VLL+  S+N  + +    
Sbjct: 1016 LSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVNGNVPMIPF- 999

Query: 913 SRPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKEIA 945
             P +V+++  + +    +R+ T V    LL+   +I+
Sbjct: 1076 --PWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999

The following BLAST results are available for this feature:

BLAST of MS002636 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136467.1	0.0e+00	99.45	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Momordica charantia]	[more]
XP_022136468.1	0.0e+00	99.44	DExH-box ATP-dependent RNA helicase DExH6 isoform X2 [Momordica charantia]	[more]
XP_038906440.1	0.0e+00	83.71	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida]	[more]
XP_022941757.1	0.0e+00	84.46	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita moschata] >XP_02...	[more]
XP_023512682.1	0.0e+00	84.38	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucurbita pepo subsp. pepo...	[more]

BLAST of MS002636 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4INY4	0.0e+00	55.56	DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT...	[more]
F4IDQ6	0.0e+00	50.00	DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH...	[more]
Q9H6S0	3.9e-163	34.18	3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2	[more]
Q5R746	1.1e-162	33.74	3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2	[more]
B2RR83	4.4e-162	34.21	3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1	[more]

BLAST of MS002636 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5K6	0.0e+00	99.45	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1C7M2	0.0e+00	99.44	DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1FT07	0.0e+00	84.46	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1INX6	0.0e+00	84.07	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A1S3BTJ2	0.0e+00	82.38	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of MS002636 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30800.1	0.0e+00	55.56	helicase in vascular tissue and tapetum	[more]
AT1G06670.1	0.0e+00	50.00	nuclear DEIH-boxhelicase	[more]
AT2G35920.1	1.2e-143	36.60	RNA helicase family protein	[more]
AT1G48650.1	1.7e-129	35.09	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.2	1.7e-129	35.09	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 693..788 e-value: 1.6E-21 score: 87.5
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 694..804 e-value: 9.3E-17 score: 61.3
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 530..630 e-value: 4.2E-16 score: 69.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 500..629 e-value: 5.0E-15 score: 55.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 496..670 score: 14.089118
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 134..341 e-value: 4.3E-21 score: 86.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 147..327 score: 18.626116
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 3..52 e-value: 3.8E-13 score: 51.0
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 7..46
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 6..46 e-value: 4.4E-9 score: 36.2
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 338..470 e-value: 4.8E-10 score: 41.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 378..466
None	No IPR available	GENE3D	1.20.120.1080		coord: 673..778 e-value: 4.4E-20 score: 73.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1124..1262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 951..988
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1124..1153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 951..980
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1174..1213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..96
None	No IPR available	PANTHER	PTHR18934:SF227	DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH2	coord: 16..47 coord: 53..1084
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 16..47 coord: 53..1084
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 476..638 e-value: 4.04041E-76 score: 247.061
None	No IPR available	CDD	cd17917	DEXHc_RHA-like	coord: 154..326 e-value: 1.86985E-83 score: 267.022
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 82..328 e-value: 2.4E-74 score: 251.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 482..647 e-value: 1.5E-55 score: 189.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 498..761
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 149..339
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 854..942 e-value: 3.1E-11 score: 43.5
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 152..310 e-value: 1.1E-7 score: 31.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002636.1	MS002636.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding