MS002576 (gene) Bitter gourd (TR) v1

Overview


Name	MS002576
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	coiled-coil domain-containing protein R3HCC1L isoform X2
Location	scaffold475: 22511 .. 26093 (+)
RNA-Seq Expression	MS002576
Synteny	MS002576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGTAGAAGAAGAGCAGCAGCGGCAGCGATCCAACTGGAGCGAGCTTGTGGAGGACCTCGTCACTGCCGGAGACATTGAATCTGCAATTTCTCTTCTCCAATCGGTGATTTCCGGCCTCCAGACCTTAAACGACTGTAATCGAGATCCCCAATTGGCCGCCGCTCTCTCCGATTTGTCCACTCTCTACTCTTCTAAAGGATTCTCTCTCAAAGCCGACGACATTGCCACTAAAGCTTTGGTTCTTAAACAACAAACCCAAGTCTCGTCTCCTGCTGGGTAAACTTCTTGTTCTTGTTCTTGGAAGGCTTGAATTCGAGGCTTCTTAGTTGTGATTCTTGAAGTTCATTGGACTACTGTTTCGAATTTCTTGATTTGAGTATGCGGTTTCTGACCTACTGGTTGATTTGACTTCGATTTTAGTTGATTTTATTTCCCTTTTCGTCTTTCAGGTATGGAAAGACTGTGAAAGGGGATCGAACTTCGTCTGCAAATGTTTCTTCGGCTTCCCGTGGTTCAGTTGGTGGAGCATCCGTTGCAACTGGTGCATTTTTCTTGTCCCTTTTTCATTTAAAATCAACGGAGATGAAGTTCTAGTTCGCTGGAAAATTTTCTTGGGTACATTAGGAATAATGATATTAAAGATGTTAATGAGATTGATTTCCTTGTGAATGGAATTTGGATCGTAGAGAGAAACTCCAGACAATGCTTTACTTTGTGATGGGTCGTTGAATGATTGTGCACTTATATTGCCTTAAACTTGCCTTGCCTTCATTTTCTTTGATTACTTTTCGAAAACTGGTCTGTTTGTAAATAGTAGTGATGGTATGTGATTTTCTTGTGAAGGTAATTTGGATCATAAAAGAGAGAGTCCAGAAAATGCTCTACCCCGTGATGGGTCTTTGGATGTTGATGGTACATTTACATTGCCTTAAACTTATAAATCGATGAAATCGAAATTTTTATTTAATGGAAATCACTGTCTCATTGTAATTAGTGCCTACCCCGCTCTGTTTTTCCCCAAATAAGAGAAAGAAACCATGAATTAGTACAAATTAAAGATGTGAGTAAATGAACTTCACCATCTTGAGTATTCCTGTATTGATCATATGAAGAGAATAGGTGGTATCTCTACCTTAAAGGCATTGTCTTTTGAGTCTAAAACACAAATACCATGAAGAAGTAGCATTTATAACTAGATCTAAGGATTATATGATAGTTGTAACACCCAAAGGCTACATTGTCTTGAAAGATATGAAGATCGTTTGTATGCATTTCTTGAAAGATATTACCTTTGGGAACAGAATCCTAGAAAGTTTATCACGCATCTTGATTTGAATAACTCCAATGCCAACAAGTCAAAAACCACTTAAGATATATCATTTTTGCATCAATACTGCACCAAGAGACTAATAATTAAATCAATATGACTTTGACAAGATGCACTAAAAAACTGAAAGTGACTTTGACGGAACTTTTAGTGCAGATCAAGCAGTTGATTATTTGATAATATATTATCGATGGAACAATAATGAACAAATAAGAAAATTTTGGACAGTAGTTAGTTTCAAATCCAATGGAAACCTGGAGAAAAAAGTAAGGGAACTGTATCATCTTTAAATGAATGGTTTTGAGCTACATACTATTTAGGAAAGGAAGTTGTATTATACATTTCAATCAAACAATTTACTAATTTTATGTTGTTGTATAGCCAACCAATGCTTATCTTATAAAGATTTTCTCGTTTCTTTTATGCTTGTGATAGAAAATAGTTGCTATTTAATTATAACAATAAGAATGTTATTTAACACAATAGGCTGTTACCATTTACAGATTGGGAAGCTATTGCAGATCGCTCACCAAATGAATTGATCTCCTTGCAAAGCTCACCAAATGAATTGCTCTCCTTGAAACGTGAACCTGATGGAACAGGACTTTCAGTCAGAGAGACAAAAGACCAAACCCCTAGACGACGTGGGAGGGGAACATTTTCATATAAGAAAGACGAATTATATAGTGATAAGCTTTCTGATTCTTCAACCATCAAGGATACAAAAGCCGAAGATGCTACTCATGGGTTGGAGGAGGGGCGTAGGGAGCTAAAAAGTGGTAAGCCTGTCGCTTAATTTCCAAATATGATAGAATTTTGTAATATTTGTTCAAGCTGGACAATTGACATAAGATACTGCCATTGTTTCGGCTTCTAAGCAGCTAAAATTGTTTGTTGATGTTTTGTACACAAGTAAAAATATCATGCAGGAGCTAAGTCTTTTCTTATTTTATTGGGTGAATCCAGCACAATATGGTACTCAACATGTTCTTGTCCTAACCGACTTTCCACTAAGTACCAAAACAATGGATCTTGAAAGACTACTTGGGAACTTCATGAATTCTGGAGTTGCCATTCGCTGGGTCAATGATACCACTGCACTTGCTGTATTTCAGACACCGTCAGCTGGTAATTTTCTTAAAACTAGAATTTCATTTTTGGGAAATCTTTTAGGTATTGGACTTCTTATCTTATTTGTAATTGAAAAGTTTTATTGTAATCTCTTGTCCTGTGGTTGATGGTTCATGACGTGGGCTAAGTCAGTAGATAATTGGTCATGTACTTCTTTTGTTATGGTCATATTTTTGTTATGTTGGTTTCTACTGACCGATATATTTCTTATTTGGCTTAGACAAAGTTTGTGAGTGACTTTTGTTATTTGAAAAAAAAAAAAGAAAAATGAGTTTTTTAGTGGAAACACTTCTTATTTGAGCATTTTAAAAAAAAATTATATGACTTTTGGTTGACTACTTAAACACTACAAAAACTTTAAATAGTGCTTTTAATGTGCTAAAAAAACAAATAGTGCTTTTAATGTGCTAAAAATGTTTTTTTGTCCTTCTAAAAGTTATTTCAACTCACCCTTAATCTTATGTCGCTTCTTGGTTCTTGATTGAAGATCTCACTGAACTTCCTCCGTGTAATGTCTCTGTCAAATGCTCAAATCTTCATATTTATCACCATTATCTTACATTGAATCATTTTTTTCAATCACTGATGTGATAATGTTGATGAATTAGTATCATGCATTAAAATTCAAGTTATATTAACGATTACCTTAATTTTCTAATGCAGCCCTTGAGGCTCTCAATCATGTTAGAAGTCCTTTCACCGTACACGTACTTGATGAGAATGATCCTCTTTTGAGATCAATTCGACCAAGAGGTAAGAGCTGCTCCTTGAGGTTTTCTATGACAACATTTCCTTACCCTTCTATATAGAGGAGTGTTTTAGATAGACGACACTATTTTCATTAGCATCCGTCATCACGAAATCTTGAATAAGGGTTATTTGCTGAAGATTTAATGAGCATAGCTGTTGGTTAATGTCAGATCTGGAACCTCCAAAGCAGAGGCCAAAGACGTGCACTAGAGCTGCCCAGCGGATGATCGCCCAGGGAATAGGAGTGAAGTTGCCTACTCCAGACTTCGGGTTGAAAGAGCTAAGAAAACAGGAAGAAGACAGGAAGAATCGCATCGTGACGAGGCAAAAATTGAGAGATGAAGCTTGGGGAGAGGATGGTCCAAGT

mRNA sequence

ATGGAGAAAGTAGAAGAAGAGCAGCAGCGGCAGCGATCCAACTGGAGCGAGCTTGTGGAGGACCTCGTCACTGCCGGAGACATTGAATCTGCAATTTCTCTTCTCCAATCGGTGATTTCCGGCCTCCAGACCTTAAACGACTGTAATCGAGATCCCCAATTGGCCGCCGCTCTCTCCGATTTGTCCACTCTCTACTCTTCTAAAGGATTCTCTCTCAAAGCCGACGACATTGCCACTAAAGCTTTGGTTCTTAAACAACAAACCCAAGTCTCGTCTCCTGCTGGGTATGGAAAGACTGTGAAAGGGGATCGAACTTCGTCTGCAAATGTTTCTTCGGCTTCCCGTGGTTCAGTTGGTGGAGCATCCGTTGCAACTGGTAATTTGGATCATAAAAGAGAGAGTCCAGAAAATGCTCTACCCCGTGATGGGTCTTTGGATGTTGATGATTGGGAAGCTATTGCAGATCGCTCACCAAATGAATTGATCTCCTTGCAAAGCTCACCAAATGAATTGCTCTCCTTGAAACGTGAACCTGATGGAACAGGACTTTCAGTCAGAGAGACAAAAGACCAAACCCCTAGACGACGTGGGAGGGGAACATTTTCATATAAGAAAGACGAATTATATAGTGATAAGCTTTCTGATTCTTCAACCATCAAGGATACAAAAGCCGAAGATGCTACTCATGGGTTGGAGGAGGGGCGTAGGGAGCTAAAAAGTGCACAATATGGTACTCAACATGTTCTTGTCCTAACCGACTTTCCACTAAGTACCAAAACAATGGATCTTGAAAGACTACTTGGGAACTTCATGAATTCTGGAGTTGCCATTCGCTGGGTCAATGATACCACTGCACTTGCTGTATTTCAGACACCGTCAGCTGCCCTTGAGGCTCTCAATCATGTTAGAAGTCCTTTCACCGTACACGTACTTGATGAGAATGATCCTCTTTTGAGATCAATTCGACCAAGAGATCTGGAACCTCCAAAGCAGAGGCCAAAGACGTGCACTAGAGCTGCCCAGCGGATGATCGCCCAGGGAATAGGAGTGAAGTTGCCTACTCCAGACTTCGGGTTGAAAGAGCTAAGAAAACAGGAAGAAGACAGGAAGAATCGCATCGTGACGAGGCAAAAATTGAGAGATGAAGCTTGGGGAGAGGATGGTCCAAGT

Coding sequence (CDS)

ATGGAGAAAGTAGAAGAAGAGCAGCAGCGGCAGCGATCCAACTGGAGCGAGCTTGTGGAGGACCTCGTCACTGCCGGAGACATTGAATCTGCAATTTCTCTTCTCCAATCGGTGATTTCCGGCCTCCAGACCTTAAACGACTGTAATCGAGATCCCCAATTGGCCGCCGCTCTCTCCGATTTGTCCACTCTCTACTCTTCTAAAGGATTCTCTCTCAAAGCCGACGACATTGCCACTAAAGCTTTGGTTCTTAAACAACAAACCCAAGTCTCGTCTCCTGCTGGGTATGGAAAGACTGTGAAAGGGGATCGAACTTCGTCTGCAAATGTTTCTTCGGCTTCCCGTGGTTCAGTTGGTGGAGCATCCGTTGCAACTGGTAATTTGGATCATAAAAGAGAGAGTCCAGAAAATGCTCTACCCCGTGATGGGTCTTTGGATGTTGATGATTGGGAAGCTATTGCAGATCGCTCACCAAATGAATTGATCTCCTTGCAAAGCTCACCAAATGAATTGCTCTCCTTGAAACGTGAACCTGATGGAACAGGACTTTCAGTCAGAGAGACAAAAGACCAAACCCCTAGACGACGTGGGAGGGGAACATTTTCATATAAGAAAGACGAATTATATAGTGATAAGCTTTCTGATTCTTCAACCATCAAGGATACAAAAGCCGAAGATGCTACTCATGGGTTGGAGGAGGGGCGTAGGGAGCTAAAAAGTGCACAATATGGTACTCAACATGTTCTTGTCCTAACCGACTTTCCACTAAGTACCAAAACAATGGATCTTGAAAGACTACTTGGGAACTTCATGAATTCTGGAGTTGCCATTCGCTGGGTCAATGATACCACTGCACTTGCTGTATTTCAGACACCGTCAGCTGCCCTTGAGGCTCTCAATCATGTTAGAAGTCCTTTCACCGTACACGTACTTGATGAGAATGATCCTCTTTTGAGATCAATTCGACCAAGAGATCTGGAACCTCCAAAGCAGAGGCCAAAGACGTGCACTAGAGCTGCCCAGCGGATGATCGCCCAGGGAATAGGAGTGAAGTTGCCTACTCCAGACTTCGGGTTGAAAGAGCTAAGAAAACAGGAAGAAGACAGGAAGAATCGCATCGTGACGAGGCAAAAATTGAGAGATGAAGCTTGGGGAGAGGATGGTCCAAGT

Protein sequence

MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDGTGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLKELRKQEEDRKNRIVTRQKLRDEAWGEDGPS

Homology

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BLAST of MS002576 vs. NCBI nr
Match: XP_022141903.1 (uncharacterized protein LOC111012159 isoform X1 [Momordica charantia])

HSP 1 Score: 745.0 bits (1922), Expect = 3.4e-211
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60
           MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD
Sbjct: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60

Query: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120
           LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG
Sbjct: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120

Query: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180
           ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG
Sbjct: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180

Query: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240
           TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS
Sbjct: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240

Query: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300
           AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN
Sbjct: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300

Query: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360
           HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK
Sbjct: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360

Query: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS
Sbjct: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 390

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BLAST of MS002576 vs. NCBI nr
Match: XP_022141904.1 (coiled-coil domain-containing protein R3HCC1L isoform X2 [Momordica charantia])

HSP 1 Score: 685.6 bits (1768), Expect = 2.4e-193
Identity = 367/390 (94.10%), Postives = 367/390 (94.10%), Query Frame = 0


Query: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60
           MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD
Sbjct: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60

Query: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120
           LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG
Sbjct: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120

Query: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180
           ASVAT                       DWEAIADRSPNELISLQSSPNELLSLKREPDG
Sbjct: 121 ASVAT-----------------------DWEAIADRSPNELISLQSSPNELLSLKREPDG 180

Query: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240
           TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS
Sbjct: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240

Query: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300
           AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN
Sbjct: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300

Query: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360
           HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK
Sbjct: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360

Query: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS
Sbjct: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 367

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BLAST of MS002576 vs. NCBI nr
Match: XP_038878405.1 (coiled-coil domain-containing protein R3HCC1L isoform X1 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 1.2e-144
Identity = 287/387 (74.16%), Postives = 317/387 (81.91%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE+QR+RSNWSE VEDLVTAGD ++AISLL+SV+S LQT ++CN DPQLAAAL+DLS L
Sbjct: 4   EEERQRRRSNWSETVEDLVTAGDTDAAISLLESVVSDLQTSDNCNPDPQLAAALTDLSGL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKG SLKADDIA KALVLKQQ QVS P G+ K +K DRTS   +S +S  SV  ASV 
Sbjct: 64  YSSKGLSLKADDIAAKALVLKQQAQVSCPTGHAK-MKEDRTSPTTISLSSCYSVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDGTGLS 184
           TGNLDH R++P+NA+  DGSLD DDWEAIADR+PNEL+ LQS          EPD   LS
Sbjct: 124 TGNLDHTRDNPDNAVLCDGSLDDDDWEAIADRAPNELLPLQS----------EPDKPELS 183

Query: 185 VRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYG 244
           V+ETKDQTPRRRGRGTFSY K ELYSDKLSDSST  DT  EDA+H LE   RELKSAQYG
Sbjct: 184 VKETKDQTPRRRGRGTFSYNKHELYSDKLSDSSTTNDTNDEDASHMLEVEHRELKSAQYG 243

Query: 245 TQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRS 304
           TQHVLVL DFPLSTKT DLERLLGNFMNSGV IRWVNDT ALAVFQTPSAALE LNHVR 
Sbjct: 244 TQHVLVLADFPLSTKTTDLERLLGNFMNSGVVIRWVNDTVALAVFQTPSAALEVLNHVRC 303

Query: 305 PFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLP-TPDFGLKELR 364
           PFT+  L+END LL SI PRDLEPPKQRPKT  R AQR+IAQG+G+KLP +  FG KELR
Sbjct: 304 PFTLRQLEENDNLLSSIPPRDLEPPKQRPKTSARTAQRLIAQGMGLKLPLSTSFGSKELR 363

Query: 365 KQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           KQEEDR+NRIV+RQKLRDEAWG+D PS
Sbjct: 364 KQEEDRRNRIVSRQKLRDEAWGDDDPS 379

[Close]

BLAST of MS002576 vs. NCBI nr
Match: XP_023516771.1 (coiled-coil domain-containing protein R3HCC1L [Cucurbita pepo subsp. pepo] >XP_023516773.1 coiled-coil domain-containing protein R3HCC1L [Cucurbita pepo subsp. pepo] >XP_023516774.1 coiled-coil domain-containing protein R3HCC1L [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.8 bits (1322), Expect = 1.3e-141
Identity = 282/384 (73.44%), Postives = 313/384 (81.51%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE+Q++RSNWSE VEDLVTAGD ++AISLL+SVIS LQT  + N DPQLAAAL+DLS L
Sbjct: 4   EEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSAL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKGFSLKADDIA KALVLKQQ QVSSPAG+ K VK DRTSSA VS +S  SV  ASV 
Sbjct: 64  YSSKGFSLKADDIAAKALVLKQQDQVSSPAGFAKIVKEDRTSSATVSLSSHNSVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDGTGLS 184
           TG LDH R+ P+NA+P     D DDWEAIADR PNEL+SLQ  P++   L RE      +
Sbjct: 124 TGTLDHTRDCPDNAVP----CDDDDWEAIADRPPNELLSLQCEPDKPEILIRETTDQ-TT 183

Query: 185 VRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYG 244
           +RET D+T RRRGRGTFSYKK ELYSD+LSDSST  DTK EDA+H LE GR+ELKSAQYG
Sbjct: 184 IRETTDKTTRRRGRGTFSYKKHELYSDRLSDSSTTNDTKDEDASHELEVGRKELKSAQYG 243

Query: 245 TQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRS 304
           TQHVLVL DFP STKT+DLERLLGNF NSGV IRWVNDT ALAVF TPS ALE LNHVR 
Sbjct: 244 TQHVLVLADFPPSTKTIDLERLLGNFKNSGVVIRWVNDTVALAVFPTPSTALEVLNHVRC 303

Query: 305 PFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLP--TPDFGLKEL 364
           PFT+ +LDEND LL S+ PRDLEPPKQRPKT  R AQR+IAQG+G+KLP  T  FG KEL
Sbjct: 304 PFTIRLLDENDTLLSSVPPRDLEPPKQRPKTSARTAQRLIAQGMGLKLPASTTGFGSKEL 363

Query: 365 RKQEEDRKNRIVTRQKLRDEAWGE 387
           RKQEEDR+NRIV+RQKLRDEAWGE
Sbjct: 364 RKQEEDRRNRIVSRQKLRDEAWGE 382

[Close]

BLAST of MS002576 vs. NCBI nr
Match: XP_022988107.1 (coiled-coil domain-containing protein R3HCC1L isoform X3 [Cucurbita maxima])

HSP 1 Score: 508.8 bits (1309), Expect = 4.1e-140
Identity = 278/388 (71.65%), Postives = 314/388 (80.93%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE++++RSNWSE VEDLVTAGD ++AISLL+SV+S LQT  + N DPQLAAAL+DLS L
Sbjct: 4   EEERKQRRSNWSETVEDLVTAGDTDAAISLLESVVSDLQTSENSNPDPQLAAALTDLSAL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKGFSLKADDI  KALVLKQ  QVSSPAG+ K VK DRTSSA V+ +S   V  ASV 
Sbjct: 64  YSSKGFSLKADDIVAKALVLKQHDQVSSPAGFAKIVKEDRTSSATVTLSSHNLVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNE-LLSLKREPDGTGL 184
           TG LDH R  P+NA+P     D DDWEAIADR PNEL+SLQ  P++  +S++   D T  
Sbjct: 124 TGTLDHTRNCPDNAVP----CDDDDWEAIADRPPNELLSLQCEPDKPEISIRETTDQT-- 183

Query: 185 SVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQY 244
           ++RET D+T RRRGRGTFSYKK ELYSD+LSDSST  DTK EDA+H LE GR+ELKSAQY
Sbjct: 184 TIRETTDKTTRRRGRGTFSYKKHELYSDRLSDSSTTNDTKDEDASHELEVGRKELKSAQY 243

Query: 245 GTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVR 304
           GTQHVLVL DFP STKT+DLERLLGNF NSGV IRWVNDT ALAVF TPS ALE LNHVR
Sbjct: 244 GTQHVLVLADFPPSTKTIDLERLLGNFKNSGVVIRWVNDTVALAVFPTPSTALEVLNHVR 303

Query: 305 SPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLP--TPDFGLKE 364
            PFT+ +LDEND LL SI PRDLEPPKQRPKT  R AQR+IAQG+G+KLP  T  FG KE
Sbjct: 304 CPFTIRLLDENDTLLSSIPPRDLEPPKQRPKTSARTAQRLIAQGMGLKLPASTTGFGSKE 363

Query: 365 LRKQEEDRKNRIVTRQKLRDEAWGEDGP 390
           LRKQEEDR+NRIV+RQKLRDEAWG+D P
Sbjct: 364 LRKQEEDRRNRIVSRQKLRDEAWGDDDP 385

[Close]

BLAST of MS002576 vs. ExPASy Swiss-Prot
Match: Q8BJM3 (Coiled-coil domain-containing protein R3HCC1L OS=Mus musculus OX=10090 GN=R3hcc1l PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-10
Identity = 52/185 (28.11%), Postives = 93/185 (50.27%), Query Frame = 0


Query: 210 SDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGN 269
           S  + +  +I++ + +  +H L +   +L   ++   HV+ + DFP   +T DL R+  +
Sbjct: 594 SGNVKNRKSIQEPRFDYYSHELPD--IDLSECEF--PHVIEIYDFPQEFRTEDLLRIFCS 653

Query: 270 FMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRSPFTVHVLDENDPLLRSIRPRD---- 329
           +   G  I+WV+DT AL VF +P  A +AL       T H + +  PL ++ R       
Sbjct: 654 YQKKGFDIKWVDDTHALGVFASPITARDALG------TKHTMVKIRPLSQATRAAKAKAR 713

Query: 330 -----LEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK-ELRKQEEDRKNRIVTRQKL 385
                L+P K+RP+T    A+R++   +GV+        + ELRK +E R+ + +   K 
Sbjct: 714 ACAEFLQPAKERPETSAALARRLVISALGVRSKQSKTEREAELRKLQEARERKRL-EAKQ 767

[Close]

BLAST of MS002576 vs. ExPASy Swiss-Prot
Match: Q7Z5L2 (Coiled-coil domain-containing protein R3HCC1L OS=Homo sapiens OX=9606 GN=R3HCC1L PE=1 SV=3)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 0


Query: 193 PRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYGTQHVLVLT 252
           PR    G   + K E +  KLS ++  +++  E  +        ++  +     HV+ + 
Sbjct: 590 PRLLQEGILMHIKPENHCSKLSGNTKSRESIQEPRSDYYNHEVPDIDLSDCEFPHVIEIY 649

Query: 253 DFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRSPFTVHVLD 312
           DFP    T DL R+  ++   G  I+WV+DT AL VF +P  A +AL         H + 
Sbjct: 650 DFPQEFHTEDLLRVFCSYQKKGFDIKWVDDTHALGVFSSPITARDALG------IKHTMV 709

Query: 313 ENDPLLRSIRPRD---------LEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK-EL 372
           +  PL ++ R            L+P K+RP+T    A+R++   +GV+        + EL
Sbjct: 710 KIRPLSQATRAAKAKARAYAEFLQPAKERPETSAALARRLVISALGVRSKQSKTEREAEL 769

Query: 373 RKQEEDRKNRIVTRQKLRDEAW 385
           +K +E R+ + +   K R++ W
Sbjct: 770 KKLQEARERKRL-EAKQREDIW 784

[Close]

BLAST of MS002576 vs. ExPASy Swiss-Prot
Match: Q8BSI6 (R3H and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=R3hcc1 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-08
Identity = 53/191 (27.75%), Postives = 87/191 (45.55%), Query Frame = 0


Query: 175 KREPDGTGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLE-E 234
           +R  +G      E +D+       G FS    E+ ++       I+    + +    E  
Sbjct: 299 ERMDEGEDKVDAEEEDEDEADADHGDFSELLQEITANLTEKEIKIEKIHLDTSAFTEELP 358

Query: 235 GRRELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPS 294
           G R+L        H++ + DF  + KT DL      F   G  I+WV+DT A+ +F  P+
Sbjct: 359 GERDL-------THLVEIYDFKPTLKTEDLLATFSEFQEKGFRIQWVDDTHAIGIFPCPA 418

Query: 295 AALEALNHVRSPFTVHVLDE---NDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGV 354
           +ALEAL    S   +  L +      L    RP+ L   K+RP+T +  A+R++A+ +G+
Sbjct: 419 SALEALAKDFSVLKIRPLTQGTKQSKLKALQRPKFLRLSKERPQTDSAVARRLVARALGL 478

Query: 355 ------KLPTP 356
                 +LPTP
Sbjct: 479 QHNRKKELPTP 482

[Close]

BLAST of MS002576 vs. ExPASy Swiss-Prot
Match: Q9Y3T6 (R3H and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HCC1 PE=1 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07
Identity = 52/179 (29.05%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 185 VRETKDQTPRRRGRGTFSYKKDELYSD---KLSDSSTIKDTKAE----DATHGLEE--GR 244
           V E ++        G  S  +D+ YS+   +++D+ T K+ + E    D +  +EE  G 
Sbjct: 255 VAEEEEDEEEVEEDGPSSCSEDD-YSELLQEITDNLTKKEIQIEKIHLDTSSFVEELPGE 314

Query: 245 RELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAA 304
           ++L        HV+ + DF  + KT DL      F   G  I+WV+DT AL +F   ++A
Sbjct: 315 KDL-------AHVVEIYDFEPALKTEDLLATFSEFQEKGFRIQWVDDTHALGIFPCLASA 374

Query: 305 LEALNHVRSPFTVHVLDE---NDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVK 352
            EAL    S   +  L +      L    RP+ L   K+RP+T    A+R++A+ +G++
Sbjct: 375 AEALTREFSVLKIRPLTQGTKQSKLKALQRPKLLRLVKERPQTNATVARRLVARALGLQ 425

[Close]

BLAST of MS002576 vs. ExPASy TrEMBL
Match: A0A6J1CLW4 (uncharacterized protein LOC111012159 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012159 PE=4 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60
           MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD
Sbjct: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60

Query: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120
           LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG
Sbjct: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120

Query: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180
           ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG
Sbjct: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180

Query: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240
           TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS
Sbjct: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240

Query: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300
           AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN
Sbjct: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300

Query: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360
           HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK
Sbjct: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360

Query: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS
Sbjct: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 390

[Close]

BLAST of MS002576 vs. ExPASy TrEMBL
Match: A0A6J1CK33 (coiled-coil domain-containing protein R3HCC1L isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012159 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.2e-193
Identity = 367/390 (94.10%), Postives = 367/390 (94.10%), Query Frame = 0


Query: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60
           MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD
Sbjct: 1   MEKVEEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSD 60

Query: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120
           LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG
Sbjct: 61  LSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGG 120

Query: 121 ASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDG 180
           ASVAT                       DWEAIADRSPNELISLQSSPNELLSLKREPDG
Sbjct: 121 ASVAT-----------------------DWEAIADRSPNELISLQSSPNELLSLKREPDG 180

Query: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240
           TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS
Sbjct: 181 TGLSVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKS 240

Query: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300
           AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN
Sbjct: 241 AQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALN 300

Query: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360
           HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK
Sbjct: 301 HVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPDFGLK 360

Query: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS
Sbjct: 361 ELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 367

[Close]

BLAST of MS002576 vs. ExPASy TrEMBL
Match: A0A6J1JC58 (coiled-coil domain-containing protein R3HCC1L isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485451 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 2.0e-140
Identity = 278/388 (71.65%), Postives = 314/388 (80.93%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE++++RSNWSE VEDLVTAGD ++AISLL+SV+S LQT  + N DPQLAAAL+DLS L
Sbjct: 4   EEERKQRRSNWSETVEDLVTAGDTDAAISLLESVVSDLQTSENSNPDPQLAAALTDLSAL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKGFSLKADDI  KALVLKQ  QVSSPAG+ K VK DRTSSA V+ +S   V  ASV 
Sbjct: 64  YSSKGFSLKADDIVAKALVLKQHDQVSSPAGFAKIVKEDRTSSATVTLSSHNLVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNE-LLSLKREPDGTGL 184
           TG LDH R  P+NA+P     D DDWEAIADR PNEL+SLQ  P++  +S++   D T  
Sbjct: 124 TGTLDHTRNCPDNAVP----CDDDDWEAIADRPPNELLSLQCEPDKPEISIRETTDQT-- 183

Query: 185 SVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQY 244
           ++RET D+T RRRGRGTFSYKK ELYSD+LSDSST  DTK EDA+H LE GR+ELKSAQY
Sbjct: 184 TIRETTDKTTRRRGRGTFSYKKHELYSDRLSDSSTTNDTKDEDASHELEVGRKELKSAQY 243

Query: 245 GTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVR 304
           GTQHVLVL DFP STKT+DLERLLGNF NSGV IRWVNDT ALAVF TPS ALE LNHVR
Sbjct: 244 GTQHVLVLADFPPSTKTIDLERLLGNFKNSGVVIRWVNDTVALAVFPTPSTALEVLNHVR 303

Query: 305 SPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLP--TPDFGLKE 364
            PFT+ +LDEND LL SI PRDLEPPKQRPKT  R AQR+IAQG+G+KLP  T  FG KE
Sbjct: 304 CPFTIRLLDENDTLLSSIPPRDLEPPKQRPKTSARTAQRLIAQGMGLKLPASTTGFGSKE 363

Query: 365 LRKQEEDRKNRIVTRQKLRDEAWGEDGP 390
           LRKQEEDR+NRIV+RQKLRDEAWG+D P
Sbjct: 364 LRKQEEDRRNRIVSRQKLRDEAWGDDDP 385

[Close]

BLAST of MS002576 vs. ExPASy TrEMBL
Match: A0A6J1H9N8 (coiled-coil domain-containing protein R3HCC1L OS=Cucurbita moschata OX=3662 GN=LOC111461782 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 5.7e-140
Identity = 280/384 (72.92%), Postives = 311/384 (80.99%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE+Q++RSNWSE VEDLVTAGD ++AISLL+SVIS LQT  + N DPQLAAAL+DLS L
Sbjct: 4   EEERQQRRSNWSETVEDLVTAGDTDAAISLLESVISDLQTSENSNPDPQLAAALTDLSAL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKGFSLKADDIA KALVLKQQ QVSS AG+ K VK DRTSSA V+ +S  SV  ASV 
Sbjct: 64  YSSKGFSLKADDIAAKALVLKQQDQVSSSAGFAKIVKEDRTSSATVTLSSHNSVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKREPDGTGLS 184
            G LDH R+ P+NA+P     D DDWEAIADR PNEL+SLQ  P++   L RE      +
Sbjct: 124 IGTLDHTRDCPDNAVP----CDDDDWEAIADRPPNELLSLQCEPDKPEILIRETTDQ-TT 183

Query: 185 VRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDTKAEDATHGLEEGRRELKSAQYG 244
           +RET D+T RRRGRGTFSYKK ELYSD+LSDSST  DTK EDA+H LE GR+ELKSAQYG
Sbjct: 184 IRETTDKTTRRRGRGTFSYKKHELYSDRLSDSSTTNDTKDEDASHELEVGRKELKSAQYG 243

Query: 245 TQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAALEALNHVRS 304
           TQHVLVL DFP STKT+DLERLLGNF NSGV IRWVNDT ALAVF TPS ALE LNHVR 
Sbjct: 244 TQHVLVLADFPPSTKTIDLERLLGNFKNSGVVIRWVNDTVALAVFPTPSTALEVLNHVRC 303

Query: 305 PFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLP--TPDFGLKEL 364
           PFT+ +LDEND LL SI PRDLEPPKQRPKT  R AQR+IAQG+G+KLP  T  FG KEL
Sbjct: 304 PFTIRLLDENDTLLSSIPPRDLEPPKQRPKTSARTAQRLIAQGMGLKLPASTTAFGSKEL 363

Query: 365 RKQEEDRKNRIVTRQKLRDEAWGE 387
           RKQEEDR+NRIV+RQKLRDEAWGE
Sbjct: 364 RKQEEDRRNRIVSRQKLRDEAWGE 382

[Close]

BLAST of MS002576 vs. ExPASy TrEMBL
Match: A0A6J1JIN7 (coiled-coil domain-containing protein R3HCC1L isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485451 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.9e-137
Identity = 279/412 (67.72%), Postives = 315/412 (76.46%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDPQLAAALSDLSTL 64
           EEE++++RSNWSE VEDLVTAGD ++AISLL+SV+S LQT  + N DPQLAAAL+DLS L
Sbjct: 4   EEERKQRRSNWSETVEDLVTAGDTDAAISLLESVVSDLQTSENSNPDPQLAAALTDLSAL 63

Query: 65  YSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGSVGGASVA 124
           YSSKGFSLKADDI  KALVLKQ  QVSSPAG+ K VK DRTSSA V+ +S   V  ASV 
Sbjct: 64  YSSKGFSLKADDIVAKALVLKQHDQVSSPAGFAKIVKEDRTSSATVTLSSHNLVDEASVG 123

Query: 125 TGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNE-LLSLKREPDGTGL 184
           TG LDH R  P+NA+P     D DDWEAIADR PNEL+SLQ  P++  +S++   D T  
Sbjct: 124 TGTLDHTRNCPDNAVP----CDDDDWEAIADRPPNELLSLQCEPDKPEISIRETTDQT-- 183

Query: 185 SVRETKDQTPRRRGRGTFSYKKDELYSDKLSDSSTIKDT--------------------- 244
           ++RET D+T RRRGRGTFSYKK ELYSD+LSDSST  DT                     
Sbjct: 184 TIRETTDKTTRRRGRGTFSYKKHELYSDRLSDSSTTNDTKDEDASHELEVGRKELKSGKS 243

Query: 245 --KAEDATHGLEEGRRELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWV 304
             K EDA+H LE GR+ELKSAQYGTQHVLVL DFP STKT+DLERLLGNF NSGV IRWV
Sbjct: 244 SHKDEDASHELEVGRKELKSAQYGTQHVLVLADFPPSTKTIDLERLLGNFKNSGVVIRWV 303

Query: 305 NDTTALAVFQTPSAALEALNHVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAA 364
           NDT ALAVF TPS ALE LNHVR PFT+ +LDEND LL SI PRDLEPPKQRPKT  R A
Sbjct: 304 NDTVALAVFPTPSTALEVLNHVRCPFTIRLLDENDTLLSSIPPRDLEPPKQRPKTSARTA 363

Query: 365 QRMIAQGIGVKLP--TPDFGLKELRKQEEDRKNRIVTRQKLRDEAWGEDGPS 391
           QR+IAQG+G+KLP  T  FG KELRKQEEDR+NRIV+RQKLRDEAWG+D PS
Sbjct: 364 QRLIAQGMGLKLPASTTGFGSKELRKQEEDRRNRIVSRQKLRDEAWGDDDPS 409

[Close]

BLAST of MS002576 vs. TAIR 10
Match: AT5G22120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 281.6 bits (719), Expect = 9.8e-76
Identity = 181/391 (46.29%), Postives = 244/391 (62.40%), Query Frame = 0


Query: 5   EEEQQRQRSNWSELVEDLVTAGDIESAISLLQSVISGLQTLNDCNRDP-------QLAAA 64
           EEE +    NWSE VEDLV AGD+ +AIS L+S+ + LQ+    +          QL+AA
Sbjct: 8   EEEGRISEPNWSERVEDLVVAGDVTAAISFLESLETNLQSRLGSSSSGERTEFGLQLSAA 67

Query: 65  LSDLSTLYSSKGFSLKADDIATKALVLKQQTQVSSPAGYGKTVKGDRTSSANVSSASRGS 124
           L+ L+ LYSS+G SLK+D++ T++ ++KQ+      A    +   +  S A+    S  +
Sbjct: 68  LTQLADLYSSEGLSLKSDELRTRSSLIKQRALDCDLASSRSSGNVENQSVASSGLKSDPN 127

Query: 125 VGGASVATGNLDHKRESPENALPRDGSLDVDDWEAIADRSPNELISLQSSPNELLSLKRE 184
           V     A G  +  + S  N+   D S   DDWEA+AD            P++LL ++  
Sbjct: 128 VSSFD-ADGKTEDSKVSSSNSAAHDSS--DDDWEALAD----------VEPSKLLPVEEL 187

Query: 185 PDGTGLSVRETKDQTPRRRGRGTFSYKKDELYSDK-LSDSSTIKDTKAEDATHGLEEGRR 244
           P+ + LSV E K Q P+RRGRGTF+YK D +YSD+  S+S    D++  D +   E+   
Sbjct: 188 PEISKLSVEEPKVQGPKRRGRGTFTYKSDAMYSDRDFSESRFDDDSEDNDLSRESEKTDE 247

Query: 245 ELKSAQYGTQHVLVLTDFPLSTKTMDLERLLGNFMNSGVAIRWVNDTTALAVFQTPSAAL 304
            LKS +YGT+HVLVL  F  S +T +LE+L  +F +SG  IRWVNDTTALAVF+TPSAAL
Sbjct: 248 SLKS-KYGTRHVLVLAGFSPSLRTTELEKLFKDFKDSGFIIRWVNDTTALAVFKTPSAAL 307

Query: 305 EALNHVRSPFTVHVLDENDPLLRSIRPRDLEPPKQRPKTCTRAAQRMIAQGIGVKLPTPD 364
           EA  HV+  FT+ VLD+ND LL SI  +DLEPP QRPKT  + AQR+IA  +G+KLP   
Sbjct: 308 EACKHVQCSFTIRVLDDNDSLLGSISGKDLEPPSQRPKTSAKTAQRLIAHSMGLKLPASG 367

Query: 365 FGLKELRKQEEDRKNRIVTRQKLRDEAWGED 388
           FG KE R QE  RKNRIV+RQK R++AWG+D
Sbjct: 368 FGSKE-RDQEAARKNRIVSRQKQREDAWGDD 383

The following BLAST results are available for this feature:

BLAST of MS002576 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141903.1	3.4e-211	100.00	uncharacterized protein LOC111012159 isoform X1 [Momordica charantia]	[more]
XP_022141904.1	2.4e-193	94.10	coiled-coil domain-containing protein R3HCC1L isoform X2 [Momordica charantia]	[more]
XP_038878405.1	1.2e-144	74.16	coiled-coil domain-containing protein R3HCC1L isoform X1 [Benincasa hispida]	[more]
XP_023516771.1	1.3e-141	73.44	coiled-coil domain-containing protein R3HCC1L [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_022988107.1	4.1e-140	71.65	coiled-coil domain-containing protein R3HCC1L isoform X3 [Cucurbita maxima]	[more]

BLAST of MS002576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BJM3	5.3e-10	28.11	Coiled-coil domain-containing protein R3HCC1L OS=Mus musculus OX=10090 GN=R3hcc1...	[more]
Q7Z5L2	1.2e-09	26.73	Coiled-coil domain-containing protein R3HCC1L OS=Homo sapiens OX=9606 GN=R3HCC1L...	[more]
Q8BSI6	1.7e-08	27.75	R3H and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=R3hc...	[more]
Q9Y3T6	5.5e-07	29.05	R3H and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HCC...	[more]

BLAST of MS002576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLW4	1.6e-211	100.00	uncharacterized protein LOC111012159 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CK33	1.2e-193	94.10	coiled-coil domain-containing protein R3HCC1L isoform X2 OS=Momordica charantia ...	[more]
A0A6J1JC58	2.0e-140	71.65	coiled-coil domain-containing protein R3HCC1L isoform X3 OS=Cucurbita maxima OX=...	[more]
A0A6J1H9N8	5.7e-140	72.92	coiled-coil domain-containing protein R3HCC1L OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JIN7	5.9e-137	67.72	coiled-coil domain-containing protein R3HCC1L isoform X2 OS=Cucurbita maxima OX=...	[more]

BLAST of MS002576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22120.1	9.8e-76	46.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 244..312 e-value: 7.4E-10 score: 40.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..144
None	No IPR available	PANTHER	PTHR21678:SF0	OS01G0965600 PROTEIN	coord: 5..386
IPR039884	Coiled-coil domain-containing protein R3HC1/R3HCL	PANTHER	PTHR21678	GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88	coord: 5..386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002576.1	MS002576.1	mRNA