Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGACCCAATTGCAGTCTCGAATGATTTTGTTAAAGACACCTGTAAGAAACATGAAGAATTGTGCAAATTATGCATTAATGTGGTAGATTCAGATCCTCACCAAGACTTGAAATTAGACCTATTCGGGCTCTTAGCCATATTTATAAACCATTCTATTGCCAATGCCACCAACGATAATTTGTATCTTGTGGAGCAGTTCAAGAGACCAGGTTTAGACAATAGAACACAACAAATCTTCGATAGATGCATAGATGTGTACGGAAGGGGCATAGATGTTCTGACATCATCCTTAGAAACAGTGTTAAAGAAACATGATATAGAGTTGAGTATGACAATGACTGACGCGTTCGACTTGTTTGCGAGTTGTGAATATGAATATGAGTATACACCGGAACCTCCAACTTGGTTGTCTCGTTATCTTACCTTACGTTCACTTATGGAGCTCTCAATGGGGACTGCAAATCTCATAGAGTGTAAAAGGGTCGCCGCTTGTGTTCCA
mRNA sequence
ACTGACCCAATTGCAGTCTCGAATGATTTTGTTAAAGACACCTGTAAGAAACATGAAGAATTGTGCAAATTATGCATTAATGTGGTAGATTCAGATCCTCACCAAGACTTGAAATTAGACCTATTCGGGCTCTTAGCCATATTTATAAACCATTCTATTGCCAATGCCACCAACGATAATTTGTATCTTGTGGAGCAGTTCAAGAGACCAGGTTTAGACAATAGAACACAACAAATCTTCGATAGATGCATAGATGTGTACGGAAGGGGCATAGATGTTCTGACATCATCCTTAGAAACAGTGTTAAAGAAACATGATATAGAGTTGAGTATGACAATGACTGACGCGTTCGACTTGTTTGCGAGTTGTGAATATGAATATGAGTATACACCGGAACCTCCAACTTGGTTGTCTCGTTATCTTACCTTACGTTCACTTATGGAGCTCTCAATGGGGACTGCAAATCTCATAGAGTGTAAAAGGGTCGCCGCTTGTGTTCCA
Coding sequence (CDS)
ACTGACCCAATTGCAGTCTCGAATGATTTTGTTAAAGACACCTGTAAGAAACATGAAGAATTGTGCAAATTATGCATTAATGTGGTAGATTCAGATCCTCACCAAGACTTGAAATTAGACCTATTCGGGCTCTTAGCCATATTTATAAACCATTCTATTGCCAATGCCACCAACGATAATTTGTATCTTGTGGAGCAGTTCAAGAGACCAGGTTTAGACAATAGAACACAACAAATCTTCGATAGATGCATAGATGTGTACGGAAGGGGCATAGATGTTCTGACATCATCCTTAGAAACAGTGTTAAAGAAACATGATATAGAGTTGAGTATGACAATGACTGACGCGTTCGACTTGTTTGCGAGTTGTGAATATGAATATGAGTATACACCGGAACCTCCAACTTGGTTGTCTCGTTATCTTACCTTACGTTCACTTATGGAGCTCTCAATGGGGACTGCAAATCTCATAGAGTGTAAAAGGGTCGCCGCTTGTGTTCCA
Protein sequence
TDPIAVSNDFVKDTCKKHEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLYLVEQFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKKHDIELSMTMTDAFDLFASCEYEYEYTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAACVP
Homology
BLAST of MS002437 vs. NCBI nr
Match:
XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia])
HSP 1 Score: 204.9 bits (520), Expect = 5.4e-49
Identity = 96/167 (57.49%), Postives = 129/167 (77.25%), Query Frame = 0
Query: 2 DPIAVSNDFVKDTCKK-HEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDN 61
+ ++V+N FV +TC K EE K+CI+V+DSDPHQDLKL+L GLLAIFINHSI NAT+++
Sbjct: 5 EKLSVANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNH 64
Query: 62 LYLVEQFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKKHDIELSMTMTDAFDLF 121
LYL+EQ KR LD + F+ C++ Y RG+D+L SSLE +LK +L + ++DAFD
Sbjct: 65 LYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSDAFDKI 124
Query: 122 ASCEYEYEYTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAACVP 168
+CE ++E TPEPP+WL+ YL LR L+ LSMGTANLI+CK+VAAC+P
Sbjct: 125 VACEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAACIP 171
BLAST of MS002437 vs. NCBI nr
Match:
KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 124.8 bits (312), Expect = 7.1e-25
Identity = 60/166 (36.14%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 5 AVSNDFVKDTCKK--HEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLY 64
+ +N+F DTC + E+L KLCI VDS+P +DLK +L G+L IF+NH+I+N ++ ++
Sbjct: 150 STNNNFAHDTCNRFQFEQLYKLCIPEVDSEPREDLKSNLTGILIIFVNHTISNFKDNVMF 209
Query: 65 LVEQFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKKHDIEL-SMTMTDAFDLFA 124
L + K L+ +T++++D C++ + RG L S+ +L + ++ +
Sbjct: 210 LQREIKSGKLNGKTKEMYDTCLENFERGTTDLQQSMHVLLTETGKDIYGLPALSVASYVT 269
Query: 125 SCEYEYEYTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAACVP 168
C ++E P+PP W SRY T L+EL +GT NL++C R AC+P
Sbjct: 270 ECVDDFEGVPKPPEWQSRYNTSNKLLELILGTCNLMKCNRELACIP 315
BLAST of MS002437 vs. NCBI nr
Match:
KAG6599042.1 (hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 67/162 (41.36%), Postives = 96/162 (59.26%), Query Frame = 0
Query: 6 VSNDFVKDTCKKHEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLYLVE 65
V+NDFV DTC K EEL LC +V+ SDP DLK +L LL IFIN ++ +D+ YL
Sbjct: 29 VANDFVHDTCNKTEELKDLCNSVIGSDPRDDLKTNLTSLLTIFINQTLRVVVDDHSYLYN 88
Query: 66 QFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLET-VLKKHDIELSMTMTDAFDLFASCE 125
Q LDNRT ++F C+++Y D L + L+ +LK + +L+M + + CE
Sbjct: 89 QTLNGELDNRTLEVFKSCMNLYQMSKDSLQALLDVELLKNKNADLNMDLAQVDNFLDLCE 148
Query: 126 YEYE-YTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAAC 166
++E +TPE TW SRY + SL+ LS+ NLI+C + C
Sbjct: 149 VDFEGFTPESLTWKSRYDYVSSLLILSLRMTNLIKCNHIHYC 190
BLAST of MS002437 vs. NCBI nr
Match:
KAG6585821.1 (hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 121.3 bits (303), Expect = 7.8e-24
Identity = 68/167 (40.72%), Postives = 99/167 (59.28%), Query Frame = 0
Query: 2 DP-IAVSNDFVKDTCKKHEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDN 61
DP + +DF + TC + EL LCI+V++S+P +DLK +L G LAIFIN ++ +D+
Sbjct: 22 DPEMKAGSDFTRATCDRTSELKDLCISVINSNPCEDLKSNLTGFLAIFINETLHVVIDDH 81
Query: 62 LYLVEQFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLE-TVLKKHDIELSMTMTDAFDL 121
YL+ Q LDNRT Q+F C Y D L LE +LK+H+ +L+M + +
Sbjct: 82 SYLLNQTLNGQLDNRTLQVFRSCASQYQMSKDSLRVLLEDELLKQHNADLNMDLGQIDNY 141
Query: 122 FASCEYEYE-YTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAAC 166
A CE E+E + EP W +RY + SL+ LS+ T NLI+C R+ C
Sbjct: 142 LALCEMEFEGFIEEPSAWKTRYDYVSSLLILSLQTTNLIKCNRIHVC 188
BLAST of MS002437 vs. NCBI nr
Match:
KAG6599036.1 (hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 120.6 bits (301), Expect = 1.3e-23
Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 0
Query: 8 NDFVKDTCKKHEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLYLVEQF 67
NDF++DTC + E+ LCI+V+DSDP +DLKL+ L IFIN ++ +D+ YL+ Q
Sbjct: 5 NDFIQDTCNRTEDFKDLCISVIDSDPREDLKLNSMDFLVIFINRTLQVIIDDHSYLLNQT 64
Query: 68 KRPGLDNRTQQIFDRCIDVYGRGIDVLTSSL-ETVLKKHDIELSMTMTDAFDLFASCEYE 127
LDNRT+ IF C+ +Y D L L E +LK+ + +L+M + C+ +
Sbjct: 65 LNEELDNRTRHIFMGCMTLYQMSKDSLRVLLNEELLKQPNADLNMKLQQIEGYLDLCQND 124
Query: 128 YE-YTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAAC 166
+E +TP P TW SRY + SL+ LS NLI+C + AC
Sbjct: 125 FEGFTPTPSTWTSRYDYVISLLILSFRMMNLIKCNYIRAC 164
BLAST of MS002437 vs. ExPASy TrEMBL
Match:
A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 96/167 (57.49%), Postives = 129/167 (77.25%), Query Frame = 0
Query: 2 DPIAVSNDFVKDTCKK-HEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDN 61
+ ++V+N FV +TC K EE K+CI+V+DSDPHQDLKL+L GLLAIFINHSI NAT+++
Sbjct: 5 EKLSVANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNH 64
Query: 62 LYLVEQFKRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKKHDIELSMTMTDAFDLF 121
LYL+EQ KR LD + F+ C++ Y RG+D+L SSLE +LK +L + ++DAFD
Sbjct: 65 LYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSDAFDKI 124
Query: 122 ASCEYEYEYTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAACVP 168
+CE ++E TPEPP+WL+ YL LR L+ LSMGTANLI+CK+VAAC+P
Sbjct: 125 VACEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAACIP 171
BLAST of MS002437 vs. ExPASy TrEMBL
Match:
A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 0
Query: 8 NDFVKDTCKKHEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLYLVEQF 67
NDFV+ TC + EL LC++ + S+P DLK +L GLL IF+N SI+N ND +L ++
Sbjct: 29 NDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNLTGLLMIFVNQSISNFKNDISFLEKEI 88
Query: 68 KRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKK--HDIELSMTMTDAFDLFASCEY 127
+ T+ + + C+ + G L ++E + K +D E + + + +L C
Sbjct: 89 NSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTGYDAE-QLPVGNVGNLAVECFD 148
Query: 128 EYEYTPEPPTWLSRYLTLRSLMELSMGTANLIECKRVAACVP 168
++E TP PP W SRY +L++LSM NLI C R AC+P
Sbjct: 149 DFEGTPVPPEWQSRYNASFALLKLSMAMINLITCNRDYACIP 189
BLAST of MS002437 vs. ExPASy TrEMBL
Match:
A0A1U7YVD9 (cell wall / vacuolar inhibitor of fructosidase 2-like OS=Nelumbo nucifera OX=4432 GN=LOC104587371 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 3.9e-05
Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0
Query: 25 CINVVDSDPHQDLKLDLFGLLAIFINHSIANATNDNLYLVEQFKRPGLDNRTQQIFDRCI 84
CI++++SDPH +LK DL G I + ++NATND Y+ E K DN T C
Sbjct: 52 CISLLESDPHSELKSDLNGFARIIMEVGLSNATNDYDYIGELVKNT-TDNATLSFLHTCS 111
Query: 85 DVYGRGIDVLTSSLETV--LKKHDIELSMTMTDAFDLFASCEYEYEYTPEPPT 136
+Y + I SS + +K + ++L T+ + C E + P+P T
Sbjct: 112 SLYEKTIAGYNSSFNMLSDIKGNYVQLYQTLDSSIQNAQDC--EDAFAPQPNT 161
BLAST of MS002437 vs. TAIR 10
Match:
AT5G46930.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )
HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 32/135 (23.70%), Postives = 62/135 (45.93%), Query Frame = 0
Query: 5 AVSNDFVKDTCKK-----HEELCKLCINVVDSDPHQDLKLDLFGLLAIFINHSIANATN- 64
A + ++D+CKK + C+ ++ +P L GL+ + ++++ T+
Sbjct: 18 ATAQSLIRDSCKKATTKDPKLKYDFCVKSLEENPQSKTAKSLEGLVFVSTKNAVSKTTSL 77
Query: 65 ----DNLYLVEQF--KRPGLDNRTQQIFDRCIDVYGRGIDVLTSSLETVLKKHDIELSMT 124
D + +++ +RP LD C+++Y ID L SL+TV + +M
Sbjct: 78 KGMVDKILKEDKYEVERPLLD---------CLELYTEAIDSLNQSLDTVKSRDYKTATML 137
Query: 125 MTDAFDLFASCEYEY 128
M+ A D SCE ++
Sbjct: 138 MSAAMDAPGSCETKF 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022137307.1 | 5.4e-49 | 57.49 | uncharacterized protein LOC111008804 [Momordica charantia] | [more] |
KAG6572152.1 | 7.1e-25 | 36.14 | Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG6599042.1 | 1.2e-24 | 41.36 | hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6585821.1 | 7.8e-24 | 40.72 | hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6599036.1 | 1.3e-23 | 40.63 | hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C7W5 | 2.6e-49 | 57.49 | uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A5D3BJB5 | 2.5e-20 | 36.42 | Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1U7YVD9 | 3.9e-05 | 31.86 | cell wall / vacuolar inhibitor of fructosidase 2-like OS=Nelumbo nucifera OX=443... | [more] |
Match Name | E-value | Identity | Description | |
AT5G46930.1 | 5.1e-05 | 23.70 | Plant invertase/pectin methylesterase inhibitor superfamily protein | [more] |