MS002354 (gene) Bitter gourd (TR) v1

Overview


Name	MS002354
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	VAMP-like protein YKT61
Location	scaffold30: 4349154 .. 4351777 (+)
RNA-Seq Expression	MS002354
Synteny	MS002354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCACGGCGTTGTTGGTCTTGAAATGCCAACCGGATGGATCTGATCCGATTATATTAGCCAACGCTTCCGATGTGAGTCATTTCGGTTACTTCCAGAGGTCCAGCGTTAGAGAGTTCGTCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCACCTGACCAGCGTCAATCTGTTCAGCACGAAGGTTTCTTCTTTTTTTCTTTTTCAATGGTTAATTCTCGATTAGGGTTATGTTTCTGCCCTTCTGCTTGGACTGTCGTTATGGGATTGTTCTTTTTTCTGATGATTTTGTTGCTTTTCTGCTGCAATTGGAGTTTCGGGTTTGAATTTGGGTTTTGAGTTTGTTTTTTTTTTCGATCAATCTCATAATCGGAAATTCATGAATTCTATATGCTGACCGGATTATGGAAAGATTAAAAGGCTGTAATTGTTAGAGGGAAAGTATTATTGCAGATTAGGGTAGAACGAACAGGATGTGATGCCACGCAACGAATTTTGAGCACAAAAAGACAAAATAAAACCCCAGTCGACGGTGGTGTATGCGACATATATACCAAGGAATGTCTCATGATGATCCCTTTTTCAGTTTTGGTTTAAGCGGGTACAACCGACAACTGGATGTTTTCGTGTAATATTTTTTACCCAGTTAGTGTTTTAATGCAATAGATTGCATATGGTTGATGCAATCTGAATACCATATAGGGGATTTATTGGGGCCCGTCATTTATAGGCAGTGAATTTGTTACAAGTTGAAACTTGAAGCTATAGTACGAGGTTTGCATATAAAGATTTTGAATTTCTTACTTTTTCTTCTTTTGGCCCTTTTCTTGTTTCAATAGGTCAATTAGTAATTTTCTTTTTGAATGATAATTTTTCAATACGAGGTTGGGTATTTCTTATGTGAGCTTCTTCTTTTTTCATGTTTTTTCTCTACTTTGAAGTCTCTGTTAAAGAAGTTTTGCAATGATAGTTTACCATTTAGCATCTTTCAGCTAGAGCTATTGCCTATTAATTATGTGCTATATTATTAAATTTTCAATGATTTTTTTTGAATTTTTGTATAGAGTACAAGGTGCATAGTTACAACAGAAATGGTCTTTGTGCTGTTGGGTTTATGGATGATCACTACCCAGTTCGAAGTGCATTTTCTCTGCTTAATCAGGTAAGCATAATTCTTTATCACACTTACCAAATGTCTTGTTATAGAGCACTCTTTCTTTCCTTGTGTTAAATTAAACGTGTGGTATGGAAATTTTTTTCTATGATTTGTCCTTGATGAGTTGCTTTTCTTTCAGAAAAAGGCGAACTAATAGGCCAGTTATTGATTTCTCATTAAATAACTCACCTGTCATTACTGCATAAGACTCACTAATATTAGCAGGGTAGTGCAATATAATGTTTAGTTTTATTCTCTAATTATATATTTGCCACAATTAAAGTGCTGAATTATTATGATATATGGATGGATGGATGGGTATTGATCTTAACAAACCTTAATCAAACATGTAAAGCTTATACTTTCTGAGAATAATGAGTCGTTTATATATTTGTCTTCGCATGATTCAGACTATTGATGATGCACGTCAATTCCTGACAGGTTGTGGATGAGTACCAGAAAAACTTTGGTGAAACATGGAGAACTACACAAGCTGATAACGCTCAACCATGGCCCTATCTGAATGATGCTATAATCAAATTCCAGGTTTATAGCTCTTCTTACTGCATTTAATTATTGACATAATTGCATGACAGAATTTGAAACTGTATCTAGTCTTCCATCCTCCCTCTTCCCACCTCAACCCAATATATGTATTGATAACCTTTCTTTTAATCGACTGACCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGAGGGAGTTGGACGAAACCAAAATTATTCTTGTAAGTCATATTATAGGTGCAGTGGTTTGTGAACTTGTGCGCATCTCATTACTGCAAAATTGCATCATTAGTCTGGCCTCGACCTTTAGTCATTTGTCATATCAAAGATACATTTCTTGTCTGGTTGTGGGATTAAGTTGTTTTGCCCGAGGCAAACTTCTTTGTGCATTTCAGTGCCAGCCTGATTGTAATCTCGCAGGAAAGAAATGATGACATATGACTTTGTTGAGGAGAATTACATTGTGTACTTGCTCATTTTGATAAGAAACCATTTTTCCTTATAACATATGGCTTATATAAAAAAGCTCCAATTGTTAATGATAAAAGATAATGGATAATTACAAAGAACGATTTAGTAGATAACTTCCTCAGTTGTATACTATATTGCTGTTTCTTGTCAATCACTTTTCATACCGATATACTCTCTCTTCCAATGCAGCATAAGACCATTGACAGTGTGCTTGCCCGTGGTGAAAAGCTGGACAGTTTAGTTGAGAAGAGCTCTGACCTCAGCGCAGCATCACAGGTAAGTTATTATTTACAGTATTCTGTGAAGCCTCCACATTACCAGTAGAAGTATATAGTATGCATGTATGTTGTTAATTTTTTTCATTTTCTGAAGACCGACCTAAACTTCTGCTCACCTGTGATTGAACAGATGTTCTACAAACAAGCAAAAAAGACCAACCAGTGTTGTACCATATTG

mRNA sequence

ATGAAGATCACGGCGTTGTTGGTCTTGAAATGCCAACCGGATGGATCTGATCCGATTATATTAGCCAACGCTTCCGATGTGAGTCATTTCGGTTACTTCCAGAGGTCCAGCGTTAGAGAGTTCGTCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCACCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTACAAGGTGCATAGTTACAACAGAAATGGTCTTTGTGCTGTTGGGTTTATGGATGATCACTACCCAGTTCGAAGTGCATTTTCTCTGCTTAATCAGGTTGTGGATGAGTACCAGAAAAACTTTGGTGAAACATGGAGAACTACACAAGCTGATAACGCTCAACCATGGCCCTATCTGAATGATGCTATAATCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGAGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACCATTGACAGTGTGCTTGCCCGTGGTGAAAAGCTGGACAGTTTAGTTGAGAAGAGCTCTGACCTCAGCGCAGCATCACAGATGTTCTACAAACAAGCAAAAAAGACCAACCAGTGTTGTACCATATTG

Coding sequence (CDS)

ATGAAGATCACGGCGTTGTTGGTCTTGAAATGCCAACCGGATGGATCTGATCCGATTATATTAGCCAACGCTTCCGATGTGAGTCATTTCGGTTACTTCCAGAGGTCCAGCGTTAGAGAGTTCGTCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCACCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTACAAGGTGCATAGTTACAACAGAAATGGTCTTTGTGCTGTTGGGTTTATGGATGATCACTACCCAGTTCGAAGTGCATTTTCTCTGCTTAATCAGGTTGTGGATGAGTACCAGAAAAACTTTGGTGAAACATGGAGAACTACACAAGCTGATAACGCTCAACCATGGCCCTATCTGAATGATGCTATAATCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGAGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACCATTGACAGTGTGCTTGCCCGTGGTGAAAAGCTGGACAGTTTAGTTGAGAAGAGCTCTGACCTCAGCGCAGCATCACAGATGTTCTACAAACAAGCAAAAAAGACCAACCAGTGTTGTACCATATTG

Protein sequence

MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL

Homology

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BLAST of MS002354 vs. NCBI nr
Match: XP_022134680.1 (VAMP-like protein YKT61 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 3.2e-109
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP
Sbjct: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
Sbjct: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

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BLAST of MS002354 vs. NCBI nr
Match: XP_008443877.1 (PREDICTED: VAMP-like protein YKT61 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 1.5e-103
Identity = 185/199 (92.96%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANASDVSHFGYFQRSSV+EF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANASDVSHFGYFQRSSVKEFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWR+ QADN+QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVIDEYQKNFGETWRSAQADNSQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGE+LDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

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BLAST of MS002354 vs. NCBI nr
Match: XP_022921839.1 (VAMP-like protein YKT61 [Cucurbita moschata] >XP_022987991.1 VAMP-like protein YKT61 [Cucurbita maxima] >XP_023516758.1 VAMP-like protein YKT61 [Cucurbita pepo subsp. pepo] >KAG6589785.1 VAMP-like protein YKT61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANA+DVSHFGYFQR SVREF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWRT QADN QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKNFGETWRTAQADNFQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVL RGEKLDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

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BLAST of MS002354 vs. NCBI nr
Match: XP_038879663.1 (VAMP-like protein YKT61 [Benincasa hispida])

HSP 1 Score: 381.3 bits (978), Expect = 5.0e-102
Identity = 184/199 (92.46%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANASDVSHFGYFQRSSV+EF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANASDVSHFGYFQRSSVKEFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQK FGETWR  QADN QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVIDEYQKIFGETWRNAQADNFQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGE+LDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. NCBI nr
Match: XP_004146695.1 (VAMP-like protein YKT61 [Cucumis sativus] >KGN65235.1 hypothetical protein Csa_019932 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.5e-102
Identity = 183/199 (91.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSD IILANASDVSHFGYFQRSSV+EF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDSIILANASDVSHFGYFQRSSVKEFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWR  Q DN+QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVIDEYQKNFGETWRNAQEDNSQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGE+LDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

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BLAST of MS002354 vs. ExPASy Swiss-Prot
Match: Q9ZRD6 (VAMP-like protein YKT61 OS=Arabidopsis thaliana OX=3702 GN=YKT61 PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.6e-98
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+ SDP+IL+NASDVSHFGYFQRSSV+EFV FVGRTVA RTPP QRQS
Sbjct: 1   MKITALLVLKCAPEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVH+YNRNGLCAVGFMDDHYPVRSAFSLLNQV+DEYQK+FGE+WR+ + D+ QP
Sbjct: 61  VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLS 
Sbjct: 121 WPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSM 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTN CCTIL
Sbjct: 181 ASQMFYKQAKKTNSCCTIL 199

[Close]

BLAST of MS002354 vs. ExPASy Swiss-Prot
Match: Q9LVM9 (VAMP-like protein YKT62 OS=Arabidopsis thaliana OX=3702 GN=YKT62 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 153/201 (76.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQ--RSSVREFVCFVGRTVAKRTPPDQR 60
           MKITALLVLKC P+  +P+ILAN SD+S FG F   RS+  EF+ F+ RTVA+RTPP QR
Sbjct: 1   MKITALLVLKCDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQR 60

Query: 61  QSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNA 120
           QSV+HEEYKVH+YN NGLCAVGFMDDHYPVRSAFSLLNQV+D YQK++G+TWR    +++
Sbjct: 61  QSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRF--ENSS 120

Query: 121 QPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDL 180
           QPWPYL +A  KF+DPAEADKLLKIQRELDETKIILHKTID VLARGEKLDSLVEKSS+L
Sbjct: 121 QPWPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSEL 180

Query: 181 SAASQMFYKQAKKTNQCCTIL 200
           S AS+MFYKQAKKTN CCT+L
Sbjct: 181 SLASKMFYKQAKKTNSCCTLL 199

[Close]

BLAST of MS002354 vs. ExPASy Swiss-Prot
Match: Q757A4 (Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=YKT6 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-46
Identity = 100/202 (49.50%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKI ++ +L+    G+  + L +A D+S FG+F+R+ V +F+ F G TVA RT   QRQS
Sbjct: 1   MKIYSIAILR--NSGNKALELCSAKDLSQFGFFERNGVSQFMTFFGETVAGRTGAGQRQS 60

Query: 61  VQHEEYKVHSYNRN-GLCAVGFMDDHYPVRSAFSLLNQVVDEY-QKNFGETWR-TTQADN 120
           ++   Y  H Y+R+ GLC V   D  YPVR A++LLN+V+DEY   +    WR   Q  +
Sbjct: 61  IEEGNYVGHVYSRSEGLCGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPAEWRDIAQTSD 120

Query: 121 AQPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSD 180
                 L   + K+QDP++AD ++++Q+ELDETKI+LHKTI+SVL RGEKLD+LV+KS  
Sbjct: 121 QLKLRELEMYLAKYQDPSQADSIMRVQQELDETKIVLHKTIESVLQRGEKLDNLVDKSES 180

Query: 181 LSAASQMFYKQAKKTNQCCTIL 200
           LSA+S+MFYKQAKKTN CC I+
Sbjct: 181 LSASSRMFYKQAKKTNSCCLIM 200

[Close]

BLAST of MS002354 vs. ExPASy Swiss-Prot
Match: P36015 (Synaptobrevin homolog YKT6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YKT6 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-45
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 0


Query: 15  GSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQSVQHEEYKVHSYNRN 74
           G   + L+   D+S FG+F+RSSV +F+ F   TVA RT   QRQS++   Y  H Y R+
Sbjct: 13  GEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQRQSIEEGNYIGHVYARS 72

Query: 75  -GLCAVGFMDDHYPVRSAFSLLNQVVDEY-QKNFGETWR-TTQADNAQPWPYLNDAIIKF 134
            G+C V   D  YPVR A++LLN+++DEY   +  E W   T+ ++A     L+  I K+
Sbjct: 73  EGICGVLITDKEYPVRPAYTLLNKILDEYLVAHPKEEWADVTETNDALKMKQLDTYISKY 132

Query: 135 QDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSAASQMFYKQAKK 194
           QDP++AD ++K+Q+ELDETKI+LHKTI++VL RGEKLD+LV+KS  L+A+S+MFYKQAKK
Sbjct: 133 QDPSQADAIMKVQQELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQAKK 192

Query: 195 TNQCCTIL 200
           +N CC I+
Sbjct: 193 SNSCCIIM 200

[Close]

BLAST of MS002354 vs. ExPASy Swiss-Prot
Match: Q6CSA2 (Synaptobrevin homolog YKT6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=YKT6 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.6e-45
Identity = 100/202 (49.50%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKI  + VL+   D +  + L++  D+S FG+F+R+SV +F+ F   TVA RT   QRQS
Sbjct: 1   MKIYYIGVLRNSDDKT--LELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQS 60

Query: 61  VQHEEYKVHSYNR-NGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGE-TWR-TTQADN 120
           V+   Y  H Y R  G+C V   D  YPVR A++LLN+V+DEY        W+  T++D+
Sbjct: 61  VEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDD 120

Query: 121 AQPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSD 180
           +     L+  I K+QDP++AD ++++Q+ELDETKI LHKTI++VL RGEKLD+LV+KS  
Sbjct: 121 SLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSES 180

Query: 181 LSAASQMFYKQAKKTNQCCTIL 200
           LSAAS+MFYKQAKKTN CC ++
Sbjct: 181 LSAASRMFYKQAKKTNSCCIVM 200

[Close]

BLAST of MS002354 vs. ExPASy TrEMBL
Match: A0A6J1BYZ8 (VAMP-like protein YKT61 OS=Momordica charantia OX=3673 GN=LOC111006889 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP
Sbjct: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
Sbjct: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. ExPASy TrEMBL
Match: A0A1S3B9V7 (VAMP-like protein YKT61 OS=Cucumis melo OX=3656 GN=LOC103487367 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.5e-104
Identity = 185/199 (92.96%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANASDVSHFGYFQRSSV+EF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANASDVSHFGYFQRSSVKEFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWR+ QADN+QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVIDEYQKNFGETWRSAQADNSQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGE+LDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. ExPASy TrEMBL
Match: A0A6J1JFX8 (VAMP-like protein YKT61 OS=Cucurbita maxima OX=3661 GN=LOC111485368 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANA+DVSHFGYFQR SVREF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWRT QADN QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKNFGETWRTAQADNFQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVL RGEKLDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. ExPASy TrEMBL
Match: A0A6J1E1N9 (VAMP-like protein YKT61 OS=Cucurbita moschata OX=3662 GN=LOC111429979 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103
Identity = 185/199 (92.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSDPIILANA+DVSHFGYFQR SVREF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWRT QADN QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKNFGETWRTAQADNFQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVL RGEKLDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. ExPASy TrEMBL
Match: A0A0A0LTH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G268290 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.2e-102
Identity = 183/199 (91.96%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+GSD IILANASDVSHFGYFQRSSV+EF+CFVGRTVAKRTPPDQRQS
Sbjct: 1   MKITALLVLKCHPEGSDSIILANASDVSHFGYFQRSSVKEFICFVGRTVAKRTPPDQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVHSYNRNGLCA+GFMDDHYPVRSAFSLLNQV+DEYQKNFGETWR  Q DN+QP
Sbjct: 61  VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVIDEYQKNFGETWRNAQEDNSQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGE+LDSLVEKSSDLSA
Sbjct: 121 WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTNQCCTIL
Sbjct: 181 ASQMFYKQAKKTNQCCTIL 199

[Close]

BLAST of MS002354 vs. TAIR 10
Match: AT5G58060.1 (SNARE-like superfamily protein )

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-99
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+ SDP+IL+NASDVSHFGYFQRSSV+EFV FVGRTVA RTPP QRQS
Sbjct: 1   MKITALLVLKCAPEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS 60

Query: 61  VQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNAQP 120
           VQHEEYKVH+YNRNGLCAVGFMDDHYPVRSAFSLLNQV+DEYQK+FGE+WR+ + D+ QP
Sbjct: 61  VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQP 120

Query: 121 WPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA 180
           WPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLS 
Sbjct: 121 WPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSM 180

Query: 181 ASQMFYKQAKKTNQCCTIL 200
           ASQMFYKQAKKTN CCTIL
Sbjct: 181 ASQMFYKQAKKTNSCCTIL 199

[Close]

BLAST of MS002354 vs. TAIR 10
Match: AT5G58060.2 (SNARE-like superfamily protein )

HSP 1 Score: 339.0 bits (868), Expect = 2.6e-93
Identity = 171/221 (77.38%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQRSSVREFVCFVGRTVAKRTPPDQRQS 60
           MKITALLVLKC P+ SDP+IL+NASDVSHFGYFQRSSV+EFV FVGRTVA RTPP QRQS
Sbjct: 1   MKITALLVLKCAPEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS 60

Query: 61  VQHEEYK----------------------VHSYNRNGLCAVGFMDDHYPVRSAFSLLNQV 120
           VQHE                         VH+YNRNGLCAVGFMDDHYPVRSAFSLLNQV
Sbjct: 61  VQHEGCAPFLILDLPGLCPGFNFLRFYLIVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQV 120

Query: 121 VDEYQKNFGETWRTTQADNAQPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTI 180
           +DEYQK+FGE+WR+ + D+ QPWPYL +A+ KFQDPAEADKLLKIQRELDETKIILHKTI
Sbjct: 121 LDEYQKSFGESWRSAKEDSNQPWPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTI 180

Query: 181 DSVLARGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 200
           DSVLARGEKLDSLVEKSSDLS ASQMFYKQAKKTN CCTIL
Sbjct: 181 DSVLARGEKLDSLVEKSSDLSMASQMFYKQAKKTNSCCTIL 221

[Close]

BLAST of MS002354 vs. TAIR 10
Match: AT5G58180.1 (Synaptobrevin family protein )

HSP 1 Score: 310.8 bits (795), Expect = 7.7e-85
Identity = 153/201 (76.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQ--RSSVREFVCFVGRTVAKRTPPDQR 60
           MKITALLVLKC P+  +P+ILAN SD+S FG F   RS+  EF+ F+ RTVA+RTPP QR
Sbjct: 1   MKITALLVLKCDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQR 60

Query: 61  QSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNA 120
           QSV+HEEYKVH+YN NGLCAVGFMDDHYPVRSAFSLLNQV+D YQK++G+TWR    +++
Sbjct: 61  QSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRF--ENSS 120

Query: 121 QPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDL 180
           QPWPYL +A  KF+DPAEADKLLKIQRELDETKIILHKTID VLARGEKLDSLVEKSS+L
Sbjct: 121 QPWPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSEL 180

Query: 181 SAASQMFYKQAKKTNQCCTIL 200
           S AS+MFYKQAKKTN CCT+L
Sbjct: 181 SLASKMFYKQAKKTNSCCTLL 199

[Close]

BLAST of MS002354 vs. TAIR 10
Match: AT5G58180.2 (Synaptobrevin family protein )

HSP 1 Score: 310.8 bits (795), Expect = 7.7e-85
Identity = 153/201 (76.12%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MKITALLVLKCQPDGSDPIILANASDVSHFGYFQ--RSSVREFVCFVGRTVAKRTPPDQR 60
           MKITALLVLKC P+  +P+ILAN SD+S FG F   RS+  EF+ F+ RTVA+RTPP QR
Sbjct: 1   MKITALLVLKCDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQR 60

Query: 61  QSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQADNA 120
           QSV+HEEYKVH+YN NGLCAVGFMDDHYPVRSAFSLLNQV+D YQK++G+TWR    +++
Sbjct: 61  QSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRF--ENSS 120

Query: 121 QPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDL 180
           QPWPYL +A  KF+DPAEADKLLKIQRELDETKIILHKTID VLARGEKLDSLVEKSS+L
Sbjct: 121 QPWPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSEL 180

Query: 181 SAASQMFYKQAKKTNQCCTIL 200
           S AS+MFYKQAKKTN CCT+L
Sbjct: 181 SLASKMFYKQAKKTNSCCTLL 199

[Close]

BLAST of MS002354 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 )

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 36/140 (25.71%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 56  DQRQSVQHEEYKVHSYNRNGLCAVGFMDDHYPVRSAFSLLNQVVDEYQKNFGETWRTTQ- 115
           D   S   + Y  H    +GL  +   D+    R  FS L  +   + + +G    + Q 
Sbjct: 41  DSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQA 100

Query: 116 -ADNAQPWPYLNDAIIKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVE 175
            A N +    LN  I  + +   AD + +I+ E+++ + ++ + ID++L RGE+L+ LV+
Sbjct: 101 YAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVD 160

Query: 176 KSSDLSAASQMFYKQAKKTN 194
           K++++   +  F KQ ++ N
Sbjct: 161 KTANMQGNTFRFRKQTRRFN 180

The following BLAST results are available for this feature:

BLAST of MS002354 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134680.1	3.2e-109	100.00	VAMP-like protein YKT61 [Momordica charantia]	[more]
XP_008443877.1	1.5e-103	92.96	PREDICTED: VAMP-like protein YKT61 [Cucumis melo]	[more]
XP_022921839.1	1.3e-102	92.96	VAMP-like protein YKT61 [Cucurbita moschata] >XP_022987991.1 VAMP-like protein Y...	[more]
XP_038879663.1	5.0e-102	92.46	VAMP-like protein YKT61 [Benincasa hispida]	[more]
XP_004146695.1	6.5e-102	91.96	VAMP-like protein YKT61 [Cucumis sativus] >KGN65235.1 hypothetical protein Csa_0...	[more]

BLAST of MS002354 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRD6	1.6e-98	87.44	VAMP-like protein YKT61 OS=Arabidopsis thaliana OX=3702 GN=YKT61 PE=2 SV=1	[more]
Q9LVM9	1.1e-83	76.12	VAMP-like protein YKT62 OS=Arabidopsis thaliana OX=3702 GN=YKT62 PE=3 SV=1	[more]
Q757A4	1.8e-46	49.50	Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / ...	[more]
P36015	2.0e-45	50.00	Synaptobrevin homolog YKT6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28...	[more]
Q6CSA2	2.6e-45	49.50	Synaptobrevin homolog YKT6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 ...	[more]

BLAST of MS002354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYZ8	1.6e-109	100.00	VAMP-like protein YKT61 OS=Momordica charantia OX=3673 GN=LOC111006889 PE=3 SV=1	[more]
A0A1S3B9V7	7.5e-104	92.96	VAMP-like protein YKT61 OS=Cucumis melo OX=3656 GN=LOC103487367 PE=3 SV=1	[more]
A0A6J1JFX8	6.4e-103	92.96	VAMP-like protein YKT61 OS=Cucurbita maxima OX=3661 GN=LOC111485368 PE=3 SV=1	[more]
A0A6J1E1N9	6.4e-103	92.96	VAMP-like protein YKT61 OS=Cucurbita moschata OX=3662 GN=LOC111429979 PE=3 SV=1	[more]
A0A0A0LTH9	3.2e-102	91.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G268290 PE=3 SV=1	[more]

BLAST of MS002354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58060.1	1.1e-99	87.44	SNARE-like superfamily protein	[more]
AT5G58060.2	2.6e-93	77.38	SNARE-like superfamily protein	[more]
AT5G58180.1	7.7e-85	76.12	Synaptobrevin family protein	[more]
AT5G58180.2	7.7e-85	76.12	Synaptobrevin family protein	[more]
AT2G25340.1	1.8e-09	25.71	vesicle-associated membrane protein 712	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001388	Synaptobrevin	PRINTS	PR00219	SYNAPTOBREVN	coord: 144..163 score: 29.73 coord: 164..183 score: 35.68
IPR001388	Synaptobrevin	PFAM	PF00957	Synaptobrevin	coord: 137..194 e-value: 7.3E-15 score: 54.5
IPR001388	Synaptobrevin	PROSITE	PS00417	SYNAPTOBREVIN	coord: 157..176
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 45..127 e-value: 4.0E-23 score: 92.8
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 48..112 e-value: 2.1E-11 score: 43.7
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 7..123 score: 22.274715
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 5..131 e-value: 6.35327E-32 score: 110.038
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..138 e-value: 3.4E-50 score: 171.5
None	No IPR available	GENE3D	1.20.5.110		coord: 142..199 e-value: 6.3E-32 score: 111.1
None	No IPR available	PANTHER	PTHR45806	SYNAPTOBREVIN HOMOLOG YKT6	coord: 1..199
None	No IPR available	PANTHER	PTHR45806:SF7	SYNAPTOBREVIN-LIKE PROTEIN-RELATED	coord: 1..199
None	No IPR available	CDD	cd15867	R-SNARE_YKT6	coord: 137..197 e-value: 6.92932E-36 score: 118.24
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 133..197
IPR042855	v-SNARE, coiled-coil homology domain	PROSITE	PS50892	V_SNARE	coord: 139..199 score: 15.389638
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002354.1	MS002354.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane