MS002287 (gene) Bitter gourd (TR) v1

Overview


Name	MS002287
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-H2 finger protein ATL13
Location	scaffold30: 3851567 .. 3852940 (-)
RNA-Seq Expression	MS002287
Synteny	MS002287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGCTGCTTCTGCAAGTAAATGGAAGAATCTTCCCTTCCCCACCGCAGCTACAGCCTTATTATGTTGCTTCGCAGCCTCCTCCTTTGGCCCAATCGAGTGGGTTCAACTTGGAAAACAAGGTCAGTCCGAGCCTACTTCTCATCATAATCATTTTAGCCATCGTCTTCTTCGTCTCTGGTTTGCTTCATCTCCTCGTTAGATTCCTCTGGACTCCCCCATTACAGAGAGACCCAGAAAGTTCAGACAGTGCCACGGCTTTTCAAGGCCAATTACAGCAACTCTTTCACCTCCATGATTCTGGGGTTGATCAGTCCTTTATTGACACCCTTCCCGTTTTCCATTACAAAGCCATTATTGGATCCAAAACCCCATTTGATTGCGCTGTCTGTCTCTGCGAGTTCGAGGCTGAGGATAAGCTCAGGCTGTTGCCAAAATGCAGCCACGCTTTTCACACAGAGTGCATTGACACATGGCTTTTGTCTCACTCAACCTGCCCTCTATGTAGATCTAGTTTACTGCCCGATCACTTCGCCCCACACGCCAGTTGTGCGCCAATTGTTCTCGTTCTTGAATCTGGGAGTGAGAGTTCTAGAGATATTGTAGACGACAGAGAGGCCGCAATTGGTAGAACGAATCCGAACCCGATTTCAGGGTCGAATTCGCAGATGGGTCTTGATGAAGACCGCGAACTGGAGACGGGATCCGGCGAGATTGGGAAATTAGAGGATTCAAACGCAACCGTGGTGACTGTGAAGCTCGGGAAATACAAAAATGTCGAATCTGGTGAAGGCGGAAGTAGCGAGAACAAGAATGTGGATTCTCGTAGGTGTTTTTCGATGGGGTCTTTCGAATATGTAATGGACGAGAATTCGTCGGTGAAAGTAGCCATTATAAACACTCCGGCGAAAAAGCAGGGGAGCAGGAAGCCGGCTCTGCCGTTGACCCCTGGTTACAGGGCAGCCATGTCGGAGTGCGATTGCGAATCAAGAAGAGAGTTCAAACTCGGTGGGTTTGAACCTGGAGAGAATGGTAACACCAATAGCAACAAAATAGAGAAGAAGAGAATAGAGAGTTTCTCGATATCGAAGATTTGGCTGAGAGGGAAGAAGGCGAGAGAATCGTCGACAGATTGGTCAAGAAGGGCAGTTTCATTTCGATTTCCCATTCAGTCGAACGGTGGGGAGTTGGAGTGGGAAAATGAAGTGCGGAATGGAATTGAATTCGATGAAGAAAACCAGAGTCGTAACAGTGATCTGGACTCTCAATGTAACCAATCTTTCGCGAAGAGGACGTTACAATGGCTGGTGGGAAGACAAAACAAGGTCATTCACTTTCAATCGTCGCCTTCATCTTCTGTTTCAAATGTA

mRNA sequence

ATGGATTCGCTGCTTCTGCAAGTAAATGGAAGAATCTTCCCTTCCCCACCGCAGCTACAGCCTTATTATGTTGCTTCGCAGCCTCCTCCTTTGGCCCAATCGAGTGGGTTCAACTTGGAAAACAAGGTCAGTCCGAGCCTACTTCTCATCATAATCATTTTAGCCATCGTCTTCTTCGTCTCTGGTTTGCTTCATCTCCTCGTTAGATTCCTCTGGACTCCCCCATTACAGAGAGACCCAGAAAGTTCAGACAGTGCCACGGCTTTTCAAGGCCAATTACAGCAACTCTTTCACCTCCATGATTCTGGGGTTGATCAGTCCTTTATTGACACCCTTCCCGTTTTCCATTACAAAGCCATTATTGGATCCAAAACCCCATTTGATTGCGCTGTCTGTCTCTGCGAGTTCGAGGCTGAGGATAAGCTCAGGCTGTTGCCAAAATGCAGCCACGCTTTTCACACAGAGTGCATTGACACATGGCTTTTGTCTCACTCAACCTGCCCTCTATGTAGATCTAGTTTACTGCCCGATCACTTCGCCCCACACGCCAGTTGTGCGCCAATTGTTCTCGTTCTTGAATCTGGGAGTGAGAGTTCTAGAGATATTGTAGACGACAGAGAGGCCGCAATTGGTAGAACGAATCCGAACCCGATTTCAGGGTCGAATTCGCAGATGGGTCTTGATGAAGACCGCGAACTGGAGACGGGATCCGGCGAGATTGGGAAATTAGAGGATTCAAACGCAACCGTGGTGACTGTGAAGCTCGGGAAATACAAAAATGTCGAATCTGGTGAAGGCGGAAGTAGCGAGAACAAGAATGTGGATTCTCGTAGGTGTTTTTCGATGGGGTCTTTCGAATATGTAATGGACGAGAATTCGTCGGTGAAAGTAGCCATTATAAACACTCCGGCGAAAAAGCAGGGGAGCAGGAAGCCGGCTCTGCCGTTGACCCCTGGTTACAGGGCAGCCATGTCGGAGTGCGATTGCGAATCAAGAAGAGAGTTCAAACTCGGTGGGTTTGAACCTGGAGAGAATGGTAACACCAATAGCAACAAAATAGAGAAGAAGAGAATAGAGAGTTTCTCGATATCGAAGATTTGGCTGAGAGGGAAGAAGGCGAGAGAATCGTCGACAGATTGGTCAAGAAGGGCAGTTTCATTTCGATTTCCCATTCAGTCGAACGGTGGGGAGTTGGAGTGGGAAAATGAAGTGCGGAATGGAATTGAATTCGATGAAGAAAACCAGAGTCGTAACAGTGATCTGGACTCTCAATGTAACCAATCTTTCGCGAAGAGGACGTTACAATGGCTGGTGGGAAGACAAAACAAGGTCATTCACTTTCAATCGTCGCCTTCATCTTCTGTTTCAAATGTA

Coding sequence (CDS)

ATGGATTCGCTGCTTCTGCAAGTAAATGGAAGAATCTTCCCTTCCCCACCGCAGCTACAGCCTTATTATGTTGCTTCGCAGCCTCCTCCTTTGGCCCAATCGAGTGGGTTCAACTTGGAAAACAAGGTCAGTCCGAGCCTACTTCTCATCATAATCATTTTAGCCATCGTCTTCTTCGTCTCTGGTTTGCTTCATCTCCTCGTTAGATTCCTCTGGACTCCCCCATTACAGAGAGACCCAGAAAGTTCAGACAGTGCCACGGCTTTTCAAGGCCAATTACAGCAACTCTTTCACCTCCATGATTCTGGGGTTGATCAGTCCTTTATTGACACCCTTCCCGTTTTCCATTACAAAGCCATTATTGGATCCAAAACCCCATTTGATTGCGCTGTCTGTCTCTGCGAGTTCGAGGCTGAGGATAAGCTCAGGCTGTTGCCAAAATGCAGCCACGCTTTTCACACAGAGTGCATTGACACATGGCTTTTGTCTCACTCAACCTGCCCTCTATGTAGATCTAGTTTACTGCCCGATCACTTCGCCCCACACGCCAGTTGTGCGCCAATTGTTCTCGTTCTTGAATCTGGGAGTGAGAGTTCTAGAGATATTGTAGACGACAGAGAGGCCGCAATTGGTAGAACGAATCCGAACCCGATTTCAGGGTCGAATTCGCAGATGGGTCTTGATGAAGACCGCGAACTGGAGACGGGATCCGGCGAGATTGGGAAATTAGAGGATTCAAACGCAACCGTGGTGACTGTGAAGCTCGGGAAATACAAAAATGTCGAATCTGGTGAAGGCGGAAGTAGCGAGAACAAGAATGTGGATTCTCGTAGGTGTTTTTCGATGGGGTCTTTCGAATATGTAATGGACGAGAATTCGTCGGTGAAAGTAGCCATTATAAACACTCCGGCGAAAAAGCAGGGGAGCAGGAAGCCGGCTCTGCCGTTGACCCCTGGTTACAGGGCAGCCATGTCGGAGTGCGATTGCGAATCAAGAAGAGAGTTCAAACTCGGTGGGTTTGAACCTGGAGAGAATGGTAACACCAATAGCAACAAAATAGAGAAGAAGAGAATAGAGAGTTTCTCGATATCGAAGATTTGGCTGAGAGGGAAGAAGGCGAGAGAATCGTCGACAGATTGGTCAAGAAGGGCAGTTTCATTTCGATTTCCCATTCAGTCGAACGGTGGGGAGTTGGAGTGGGAAAATGAAGTGCGGAATGGAATTGAATTCGATGAAGAAAACCAGAGTCGTAACAGTGATCTGGACTCTCAATGTAACCAATCTTTCGCGAAGAGGACGTTACAATGGCTGGTGGGAAGACAAAACAAGGTCATTCACTTTCAATCGTCGCCTTCATCTTCTGTTTCAAATGTA

Protein sequence

MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFAPHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEIGKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV

Homology

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BLAST of MS002287 vs. NCBI nr
Match: XP_022134692.1 (RING-H2 finger protein ATL13 [Momordica charantia])

HSP 1 Score: 908.7 bits (2347), Expect = 2.1e-260
Identity = 457/458 (99.78%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFH ECIDTWLLSHSTCPLCRSSLLPDHFA
Sbjct: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHXECIDTWLLSHSTCPLCRSSLLPDHFA 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI
Sbjct: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII
Sbjct: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES 360
           NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES
Sbjct: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES 360

Query: 361 FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD 420
           FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD
Sbjct: 361 FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD 420

Query: 421 LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV 459
           LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV
Sbjct: 421 LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV 458

[Close]

BLAST of MS002287 vs. NCBI nr
Match: XP_022973668.1 (RING-H2 finger protein ATL13-like [Cucurbita maxima])

HSP 1 Score: 715.7 bits (1846), Expect = 2.6e-202
Identity = 373/474 (78.69%), Postives = 408/474 (86.08%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQSSGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQSSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH SCAPIVLVLESGSESSRD V + +A       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSCAPIVLVLESGSESSRDNVSNTQAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDS ATVVTVKLGKYKN+++GEGGSSENKN+DSRRCFSMGSFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDSKATVVTVKLGKYKNIDAGEGGSSENKNMDSRRCFSMGSFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSEC+CESRREF+L G EP      GEN + NS    
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECECESRREFRLSGIEPFREVRRGENTDRNS---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ST+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETSTESSRRAVSFRFPIQKNGGDWSASEMGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           +  E DEENQSR S  DSQ NQSFAKRTL WL+G+QNKV HF+ SSPSS +SN+
Sbjct: 421 SETELDEENQSRCS-FDSQFNQSFAKRTLLWLMGKQNKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. NCBI nr
Match: XP_023529524.1 (RING-H2 finger protein ATL13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 712.6 bits (1838), Expect = 2.2e-201
Identity = 371/474 (78.27%), Postives = 406/474 (85.65%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQ SGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQPSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH SCAPIVLVLESGSESSRD V + EA       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSCAPIVLVLESGSESSRDNVSNTEAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLED  ATVVTVKLGKYK++++GEGGSSENKN+DSRRCFSMGSFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDEKATVVTVKLGKYKSIDAGEGGSSENKNMDSRRCFSMGSFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSECDCESRREF+L G EP      GEN + N     
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECDCESRREFRLSGIEPFREVKRGENTDRNC---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ST+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETSTESSRRAVSFRFPIQKNGGDWSGSEMGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           +  E DEENQSR+S  DSQ NQSFAKRTL WL+G+QNKV HF+ SSPSS +SN+
Sbjct: 421 SETELDEENQSRSS-FDSQFNQSFAKRTLLWLMGKQNKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. NCBI nr
Match: KAG7035715.1 (RING-H2 finger protein ATL13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 709.9 bits (1831), Expect = 1.4e-200
Identity = 371/474 (78.27%), Postives = 405/474 (85.44%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQSSGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQSSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH SCAPIVLVLESGSESSRD V + EA       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSCAPIVLVLESGSESSRDNVSNTEAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDS ATVVTVKLGKYKN+++GEGGSS NKN+DSRRCFSMGSFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDSKATVVTVKLGKYKNIDAGEGGSSGNKNMDSRRCFSMGSFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSECDCESRREF+L G EP      GEN + N     
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECDCESRREFRLSGIEPLREVKRGENTDRNC---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ T+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETPTESSRRAVSFRFPIQKNGGDWNASEIGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           +  E DEENQSR S  DSQ NQSFAKRTL WL+G+Q+KV HF+ SSPSS +SN+
Sbjct: 421 SETELDEENQSRCS-FDSQFNQSFAKRTLLWLMGKQSKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. NCBI nr
Match: XP_022928975.1 (RING-H2 finger protein ATL13-like [Cucurbita moschata])

HSP 1 Score: 706.1 bits (1821), Expect = 2.0e-199
Identity = 371/474 (78.27%), Postives = 403/474 (85.02%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQ SGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQPSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH S APIVLVLESGSESSRD V + EA       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSYAPIVLVLESGSESSRDNVSNTEAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDS ATVVTVKLGKYKN+++GEGGSS NKN+DSRRCFSM SFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDSKATVVTVKLGKYKNIDAGEGGSSGNKNMDSRRCFSMESFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSECDCESRREF+L G EP      GEN + N     
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECDCESRREFRLSGIEPFREVKRGENTDRNC---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ T+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETPTESSRRAVSFRFPIQKNGGDWNASEMGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           N  E DEENQSR S LDSQ NQSFAKRTL WL+G+QNKV HF+ SSPSS +SN+
Sbjct: 421 NETELDEENQSRCS-LDSQFNQSFAKRTLVWLMGKQNKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 372.1 bits (954), Expect = 9.1e-102
Identity = 233/462 (50.43%), Postives = 297/462 (64.29%), Query Frame = 0


Query: 19  LQPYYVASQPP-PLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLWTPPLQ 78
           L P  +  +PP  L  S+ F+L +K+SPS+LLIIIIL+I+FF+SGLLHLLVRFL TP  +
Sbjct: 22  LSPSSLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR 81

Query: 79  RDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGSKT-PFDCAVCLCEF 138
              +  D+ TA QGQLQQLFHLHDSGVDQSFIDTLPVFHYK+IIG K  PFDCAVCLCEF
Sbjct: 82  DREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEF 141

Query: 139 EAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFAPHASCAPIVLVLESGS 198
           E EDKLRLLPKCSHAFH +CIDTWLLSHSTCPLCRSSLL D  +     +  +LVLES S
Sbjct: 142 ETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESAS 201

Query: 199 E-SSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDREL-----ETGSGE---IGKLEDSN 258
           + SSR+I  DR++A      + I  S++ +GL  + +L     ++G G+    G+L  S 
Sbjct: 202 DHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSV 261

Query: 259 ATVV--TVKLGKYKNVESGEGGSSEN-----KNVDSRRCFSMGSFEYVMDENSSVKVAII 318
             VV  +VKLGK++N++ GEG SS N      ++D RRCFSMGS+EY+MDE +++KV   
Sbjct: 262 GKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKV--- 321

Query: 319 NTPAKKQGSRKPALPLTPGYRAAMSEC--DCESRREFKLGGFEPGENGNTNSNKIEKKRI 378
           +   KKQ S+   L   PG+R AMSEC  D   R +F   G           N +E+   
Sbjct: 322 HVSTKKQSSKNRGL---PGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVER--- 381

Query: 379 ESFSISKIWLRGKKARESS----------TDWSRRAVSFRFPIQSNGGELEWENEVRNGI 438
           ESFS+SKIWLRGKK + S           +  S RA SFR   Q N  +      + +G 
Sbjct: 382 ESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDA----MIESGC 441

Query: 439 EFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQSS 451
           E D +    +  L+++   SFA+RT+ WL GRQNKV+H  SS
Sbjct: 442 EEDNQKCENSESLETK-TPSFARRTMLWLAGRQNKVVHSSSS 469

[Close]

BLAST of MS002287 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-90
Identity = 212/465 (45.59%), Postives = 277/465 (59.57%), Query Frame = 0


Query: 11  RIFPSPPQLQPYYVASQPPPL----AQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHL 70
           +I P     Q    +S PPPL    + +S  NL +K++P++LLIIIIL+I+FF+SGLLH+
Sbjct: 3   KILPEMKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHI 62

Query: 71  LVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGSK-T 130
           LV+FL TP  +   +  D+ TA QGQLQQLF+LHDSGVDQS IDTLPVFHYK+I+G K +
Sbjct: 63  LVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKIS 122

Query: 131 PFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFAPHASC 190
           PFDC VCLCEFE EDKLRLLPKCSHAFH ECIDTWLLSHSTCPLCRS+LL    + H   
Sbjct: 123 PFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLS 182

Query: 191 APIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEIGKLE- 250
           +  +LVLES  +SSRD+V             P+  SNSQ+G D + + E+     G+   
Sbjct: 183 SSYLLVLES-EQSSRDMV-------------PVLESNSQLGYDVNNDSESTRIRSGRKSC 242

Query: 251 ---------DSNATVVTVKLGKYKNVES-GEGG-------SSENKNVDSRRCFSMGSFEY 310
                    D     + VKLGK++N++  GEG        S  +KNVD RRC SMGS+EY
Sbjct: 243 DPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEY 302

Query: 311 VMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGN 370
           +MD+ +++KV +  +  K  G  +      P +R  MSEC           GF+P   G 
Sbjct: 303 IMDQEATLKVHV--STKKLSGKDR-----VPSHRTVMSEC-----------GFDPTVKG- 362

Query: 371 TNSNKIEKKRI--ESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVR 430
                IEK  +  ESFS+SKIWLRGKK ++  T       SF      +   L + N   
Sbjct: 363 -----IEKSVVERESFSLSKIWLRGKKEKQKGTSARDSDCSF-----VSSSSLRFPN--- 421

Query: 431 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQSS 451
           + I  +E  +S NS+       SFA+RT+ WL GRQNK++   +S
Sbjct: 423 HRIPPEESLKSENSESLETKTPSFARRTMHWLAGRQNKIVQPSTS 421

[Close]

BLAST of MS002287 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-57
Identity = 172/401 (42.89%), Postives = 219/401 (54.61%), Query Frame = 0


Query: 13  FPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLW 72
           F  PP      + S P P   SSG    N++SP++L +I+ILA++FF+SGLLHLLVRFL 
Sbjct: 15  FAYPPPFYKDPILSPPSPPPPSSG----NRISPAVLFVIVILAVLFFISGLLHLLVRFLI 74

Query: 73  TPP-------LQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGS-- 132
             P         R PE S S  A Q QLQQLFHL+DSG+DQ+FID LPVFHYK I+GS  
Sbjct: 75  KHPSATASSRSNRFPEISTS-DALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAG 134

Query: 133 --------KTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLL 192
                   + PFDCAVCLCEF  +DKLRLLP CSHAFH  CIDTWL S+STCPLCR +L 
Sbjct: 135 GGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL- 194

Query: 193 PDHFAPHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELET 252
              F+P  S       +E+      DI +D E   G T     +GS   M   E +E+  
Sbjct: 195 ---FSPGFS-------MENPMFDFDDIREDEE---GVTE----NGSQKTM---EIQEIVV 254

Query: 253 GSGEIGKLEDSNATVVTVKLGKYK---NVESGE------GGSSENKNVDSRRCFSMGSFE 312
             G           V+ V+LGK+K   NV +G+      GG + + N+D+RRCFSMGS++
Sbjct: 255 EKG-----------VLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQ 314

Query: 313 YVMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENG 372
           Y++  NS +KV   N        R P L             D ES         + G + 
Sbjct: 315 YILG-NSELKVPFAN-------DRLPRL----------KPQDKESE--------QTGNSS 351

Query: 373 NTNSNKIEK-KRIESFSISKIWLRGKKARESSTDWSRRAVS 387
           + ++ KI    + ESFS+SKIWL  KK + SS D  RR  S
Sbjct: 375 SEDNKKINTVAKGESFSVSKIWLWPKKDKFSS-DAQRRLPS 351

[Close]

BLAST of MS002287 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-50
Identity = 146/393 (37.15%), Postives = 199/393 (50.64%), Query Frame = 0


Query: 5   LLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLL 64
           L Q++    PSP  L      S     + SSG N  N++SP +L II++L+++FF+  +L
Sbjct: 16  LNQISPSSAPSPITLNHQLTDSSS---SSSSGGN--NRISPIILFIIVLLSVIFFICSIL 75

Query: 65  HLLVRF--------LWTPPLQ--RDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPV 124
           HLLVR+        L + P +  ++PE SDS T +Q QLQQLFHLHDSG+DQ+ ID LPV
Sbjct: 76  HLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDT-YQRQLQQLFHLHDSGLDQALIDALPV 135

Query: 125 FHYKAIIGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSL 184
           F YK I G+K PFDCAVCLCEF  +DKLRLLP CSHAFH +CIDTWLLS+STCPLCR +L
Sbjct: 136 FLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL 195

Query: 185 LPDHFAPHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNP------ISGSNSQMGLD 244
                                             ++G     P       +G +   G+ 
Sbjct: 196 F---------------------------------SLGHQFEYPDFNFGFFAGDDGGGGVR 255

Query: 245 EDRELETGSGEIGKLEDSNATVVTVKLGKYKN---VESGE-----GGSSENKNVDSRRCF 304
                +    EIGK       V +V+LGK+++   V +GE     GG + + ++D+RRCF
Sbjct: 256 VSPVQKPAENEIGK------RVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCF 315

Query: 305 SMGSFEYVMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGF 364
           SMGS++Y++ E S + VA+                                         
Sbjct: 316 SMGSYQYIVAE-SDLVVALC---------------------------------------- 321

Query: 365 EPGENGNTNSNKIEKKRI------ESFSISKIW 368
            P   G  N+  +E K+I      ESFS+SKIW
Sbjct: 376 -PNNEGLKNNKDVEGKKINMRSKGESFSVSKIW 321

[Close]

BLAST of MS002287 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.5e-43
Identity = 94/169 (55.62%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 37  FNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLWTPPLQRDPE---SSDSATAFQGQL 96
           F+L   +SP +LL I +L+I+FFV+ L+HLLV+FL  P  + D      ++S+TA QG+ 
Sbjct: 26  FDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRY 85

Query: 97  QQLFHLHDSGVDQSFIDTLPVFHYKAIIGSKTPF-DCAVCLCEFEAEDKLRLLPKCSHAF 156
           Q  F+LHD+ +DQSFID LP+ HYK +IG +    DCAVCL EF AED+LRLLPKCSHAF
Sbjct: 86  QTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAF 145

Query: 157 HTECIDTWLLSHSTCPLCRSSLLPDHFAPHASCAPIVLVLESGSESSRD 202
           H ECIDTWLL++STCPLCR +LL       AS + IVLV ES  ++S+D
Sbjct: 146 HVECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQD 194

[Close]

BLAST of MS002287 vs. ExPASy TrEMBL
Match: A0A6J1C0B0 (RING-H2 finger protein ATL13 OS=Momordica charantia OX=3673 GN=LOC111006899 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.0e-260
Identity = 457/458 (99.78%), Postives = 457/458 (99.78%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFH ECIDTWLLSHSTCPLCRSSLLPDHFA
Sbjct: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHXECIDTWLLSHSTCPLCRSSLLPDHFA 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI
Sbjct: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII
Sbjct: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES 360
           NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES
Sbjct: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGNTNSNKIEKKRIES 360

Query: 361 FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD 420
           FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD
Sbjct: 361 FSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVRNGIEFDEENQSRNSD 420

Query: 421 LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV 459
           LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV
Sbjct: 421 LDSQCNQSFAKRTLQWLVGRQNKVIHFQSSPSSSVSNV 458

[Close]

BLAST of MS002287 vs. ExPASy TrEMBL
Match: A0A6J1IDU5 (RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111472249 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 373/474 (78.69%), Postives = 408/474 (86.08%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQSSGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQSSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH SCAPIVLVLESGSESSRD V + +A       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSCAPIVLVLESGSESSRDNVSNTQAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDS ATVVTVKLGKYKN+++GEGGSSENKN+DSRRCFSMGSFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDSKATVVTVKLGKYKNIDAGEGGSSENKNMDSRRCFSMGSFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSEC+CESRREF+L G EP      GEN + NS    
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECECESRREFRLSGIEPFREVRRGENTDRNS---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ST+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETSTESSRRAVSFRFPIQKNGGDWSASEMGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           +  E DEENQSR S  DSQ NQSFAKRTL WL+G+QNKV HF+ SSPSS +SN+
Sbjct: 421 SETELDEENQSRCS-FDSQFNQSFAKRTLLWLMGKQNKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. ExPASy TrEMBL
Match: A0A6J1ESY3 (RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111435713 PE=4 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 9.8e-200
Identity = 371/474 (78.27%), Postives = 403/474 (85.02%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQLQPYY+ ++PPP AQ SGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQLQPYYLDARPPPFAQPSGFNLENKVSPSILLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPLQRDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLQRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH S APIVLVLESGSESSRD V + EA       NPI+GSNSQ+GL  D E + GS EI
Sbjct: 181 PHTSYAPIVLVLESGSESSRDNVSNTEAT------NPITGSNSQVGLGGDSEFDAGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
           GKLEDS ATVVTVKLGKYKN+++GEGGSS NKN+DSRRCFSM SFEYVM+ENSS+KVAI 
Sbjct: 241 GKLEDSKATVVTVKLGKYKNIDAGEGGSSGNKNMDSRRCFSMESFEYVMEENSSLKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP------GENGNTNSNKIE 360
           +TPAKKQ SRKPALPLTPGYRAAMSECDCESRREF+L G EP      GEN + N     
Sbjct: 301 STPAKKQPSRKPALPLTPGYRAAMSECDCESRREFRLSGIEPFREVKRGENTDRNC---- 360

Query: 361 KKRIESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGE--------LEWENE-VR 420
            K+I+SFS+SKIWLRGK  RE+ T+ SRRAVSFRFPIQ NGG+          WENE +R
Sbjct: 361 -KKIDSFSVSKIWLRGKNQRETPTESSRRAVSFRFPIQKNGGDWNASEMGVSRWENEIIR 420

Query: 421 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQ-SSPSSSVSNV 459
           N  E DEENQSR S LDSQ NQSFAKRTL WL+G+QNKV HF+ SSPSS +SN+
Sbjct: 421 NETELDEENQSRCS-LDSQFNQSFAKRTLVWLMGKQNKVTHFESSSPSSCISNL 462

[Close]

BLAST of MS002287 vs. ExPASy TrEMBL
Match: A0A5D3BAM4 (RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00060 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.7e-197
Identity = 374/475 (78.74%), Postives = 399/475 (84.00%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQ QPY++A+QPPPLAQSSGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQFQPYFLAAQPPPLAQSSGFNLENKVSPSVLLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPL RDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLHRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH +C+PIVLVLESGSESSRDIV DRE      + N I GSNS+MG   D E E GS EI
Sbjct: 181 PHTTCSPIVLVLESGSESSRDIVSDREIT---NHTNQIPGSNSRMGFVGDGEFEGGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
            KLEDSNATVVTVKLGKYKNV++GE GSSENKNVDSRRCFSMGSFEYVMDENSSVKVAI 
Sbjct: 241 TKLEDSNATVVTVKLGKYKNVDAGESGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP---GENGNTNSNKIEKKR 360
           +TP KKQ SRKPALPLTPGYRAAMSE DCESRREFKL G EP    ENGN+NSN     +
Sbjct: 301 STPVKKQASRKPALPLTPGYRAAMSEYDCESRREFKLNGIEPLKTEENGNSNSN---NNK 360

Query: 361 IESFSISKIWLRGKKARESSTDWS-RRAVSFRFPIQSNG--GELEWENEVRNGIEFDEEN 420
           IESFS+SKIWLRGK  +ES TD S RR VSFR PIQ N       WENE    +E DEEN
Sbjct: 361 IESFSVSKIWLRGKNPKESLTDSSRRRTVSFRLPIQMNSEMNVCRWENE---SMELDEEN 420

Query: 421 QSRNSDLDSQCNQSFAKRTLQWLV-GRQNKVIHFQSS----------PSSSVSNV 459
           QSRNS L+SQ NQS AKRTLQWL+ G+ NKV HF+S+          PSSSVSN+
Sbjct: 421 QSRNS-LESQYNQSLAKRTLQWLMGGKLNKVTHFESTSSPSPSPSPPPSSSVSNI 465

[Close]

BLAST of MS002287 vs. ExPASy TrEMBL
Match: A0A5A7SX57 (RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002170 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.5e-197
Identity = 373/473 (78.86%), Postives = 399/473 (84.36%), Query Frame = 0


Query: 1   MDSLLLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFV 60
           MDSLLLQVNGR FPSPPQ QPY++A+QPPPLAQSSGFNLENKVSPS+LLIIIILAIVFFV
Sbjct: 1   MDSLLLQVNGRFFPSPPQFQPYFLAAQPPPLAQSSGFNLENKVSPSVLLIIIILAIVFFV 60

Query: 61  SGLLHLLVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120
           SGLLHLLVRFLWTPPL RDPESSD+ TAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI
Sbjct: 61  SGLLHLLVRFLWTPPLHRDPESSDNVTAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAI 120

Query: 121 IGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFA 180
           IGSK+PFDCAVCLCEFE EDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHF+
Sbjct: 121 IGSKSPFDCAVCLCEFEPEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFS 180

Query: 181 PHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEI 240
           PH +C+PIVLVLESGSESSRDIV DRE      + N I GSNS+MG   D E E GS EI
Sbjct: 181 PHTTCSPIVLVLESGSESSRDIVSDREIT---NHTNQIPGSNSRMGFVGDGEFEGGSSEI 240

Query: 241 GKLEDSNATVVTVKLGKYKNVESGEGGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAII 300
            KLEDSNATVVTVKLGKYKNV++GE GSSENKNVDSRRCFSMGSFEYVMDENSSVKVAI 
Sbjct: 241 TKLEDSNATVVTVKLGKYKNVDAGESGSSENKNVDSRRCFSMGSFEYVMDENSSVKVAIR 300

Query: 301 NTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEP---GENGNTNSNKIEKKR 360
           +TP KKQ SRKPALPLTPGYRAAMSE DCESRREFKL G EP    ENGN+NSN     +
Sbjct: 301 STPVKKQASRKPALPLTPGYRAAMSEYDCESRREFKLNGIEPLKTEENGNSNSN---NNK 360

Query: 361 IESFSISKIWLRGKKARESSTDWS-RRAVSFRFPIQSNG--GELEWENEVRNGIEFDEEN 420
           IESFS+SKIWLRGK  +ES TD S RR VSFR PI+ N       WENE    +E DEEN
Sbjct: 361 IESFSVSKIWLRGKNPKESLTDSSRRRTVSFRLPIEMNSEMNVCRWENE---SMELDEEN 420

Query: 421 QSRNSDLDSQCNQSFAKRTLQWLV-GRQNKVIHFQSS--------PSSSVSNV 459
           QSRNS L+SQ NQS AKRTLQWL+ G+ NKV HF+S+        PSSSVSN+
Sbjct: 421 QSRNS-LESQYNQSLAKRTLQWLMGGKLNKVTHFESTSPPSPSPPPSSSVSNI 463

[Close]

BLAST of MS002287 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 372.1 bits (954), Expect = 6.5e-103
Identity = 233/462 (50.43%), Postives = 297/462 (64.29%), Query Frame = 0


Query: 19  LQPYYVASQPP-PLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLWTPPLQ 78
           L P  +  +PP  L  S+ F+L +K+SPS+LLIIIIL+I+FF+SGLLHLLVRFL TP  +
Sbjct: 22  LSPSSLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR 81

Query: 79  RDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGSKT-PFDCAVCLCEF 138
              +  D+ TA QGQLQQLFHLHDSGVDQSFIDTLPVFHYK+IIG K  PFDCAVCLCEF
Sbjct: 82  DREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEF 141

Query: 139 EAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFAPHASCAPIVLVLESGS 198
           E EDKLRLLPKCSHAFH +CIDTWLLSHSTCPLCRSSLL D  +     +  +LVLES S
Sbjct: 142 ETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESAS 201

Query: 199 E-SSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDREL-----ETGSGE---IGKLEDSN 258
           + SSR+I  DR++A      + I  S++ +GL  + +L     ++G G+    G+L  S 
Sbjct: 202 DHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSV 261

Query: 259 ATVV--TVKLGKYKNVESGEGGSSEN-----KNVDSRRCFSMGSFEYVMDENSSVKVAII 318
             VV  +VKLGK++N++ GEG SS N      ++D RRCFSMGS+EY+MDE +++KV   
Sbjct: 262 GKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKV--- 321

Query: 319 NTPAKKQGSRKPALPLTPGYRAAMSEC--DCESRREFKLGGFEPGENGNTNSNKIEKKRI 378
           +   KKQ S+   L   PG+R AMSEC  D   R +F   G           N +E+   
Sbjct: 322 HVSTKKQSSKNRGL---PGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVER--- 381

Query: 379 ESFSISKIWLRGKKARESS----------TDWSRRAVSFRFPIQSNGGELEWENEVRNGI 438
           ESFS+SKIWLRGKK + S           +  S RA SFR   Q N  +      + +G 
Sbjct: 382 ESFSVSKIWLRGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDA----MIESGC 441

Query: 439 EFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQSS 451
           E D +    +  L+++   SFA+RT+ WL GRQNKV+H  SS
Sbjct: 442 EEDNQKCENSESLETK-TPSFARRTMLWLAGRQNKVVHSSSS 469

[Close]

BLAST of MS002287 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 335.1 bits (858), Expect = 8.8e-92
Identity = 212/465 (45.59%), Postives = 277/465 (59.57%), Query Frame = 0


Query: 11  RIFPSPPQLQPYYVASQPPPL----AQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHL 70
           +I P     Q    +S PPPL    + +S  NL +K++P++LLIIIIL+I+FF+SGLLH+
Sbjct: 3   KILPEMKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHI 62

Query: 71  LVRFLWTPPLQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGSK-T 130
           LV+FL TP  +   +  D+ TA QGQLQQLF+LHDSGVDQS IDTLPVFHYK+I+G K +
Sbjct: 63  LVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKIS 122

Query: 131 PFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLLPDHFAPHASC 190
           PFDC VCLCEFE EDKLRLLPKCSHAFH ECIDTWLLSHSTCPLCRS+LL    + H   
Sbjct: 123 PFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLS 182

Query: 191 APIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELETGSGEIGKLE- 250
           +  +LVLES  +SSRD+V             P+  SNSQ+G D + + E+     G+   
Sbjct: 183 SSYLLVLES-EQSSRDMV-------------PVLESNSQLGYDVNNDSESTRIRSGRKSC 242

Query: 251 ---------DSNATVVTVKLGKYKNVES-GEGG-------SSENKNVDSRRCFSMGSFEY 310
                    D     + VKLGK++N++  GEG        S  +KNVD RRC SMGS+EY
Sbjct: 243 DPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEY 302

Query: 311 VMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENGN 370
           +MD+ +++KV +  +  K  G  +      P +R  MSEC           GF+P   G 
Sbjct: 303 IMDQEATLKVHV--STKKLSGKDR-----VPSHRTVMSEC-----------GFDPTVKG- 362

Query: 371 TNSNKIEKKRI--ESFSISKIWLRGKKARESSTDWSRRAVSFRFPIQSNGGELEWENEVR 430
                IEK  +  ESFS+SKIWLRGKK ++  T       SF      +   L + N   
Sbjct: 363 -----IEKSVVERESFSLSKIWLRGKKEKQKGTSARDSDCSF-----VSSSSLRFPN--- 421

Query: 431 NGIEFDEENQSRNSDLDSQCNQSFAKRTLQWLVGRQNKVIHFQSS 451
           + I  +E  +S NS+       SFA+RT+ WL GRQNK++   +S
Sbjct: 423 HRIPPEESLKSENSESLETKTPSFARRTMHWLAGRQNKIVQPSTS 421

[Close]

BLAST of MS002287 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-58
Identity = 172/401 (42.89%), Postives = 219/401 (54.61%), Query Frame = 0


Query: 13  FPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLW 72
           F  PP      + S P P   SSG    N++SP++L +I+ILA++FF+SGLLHLLVRFL 
Sbjct: 15  FAYPPPFYKDPILSPPSPPPPSSG----NRISPAVLFVIVILAVLFFISGLLHLLVRFLI 74

Query: 73  TPP-------LQRDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPVFHYKAIIGS-- 132
             P         R PE S S  A Q QLQQLFHL+DSG+DQ+FID LPVFHYK I+GS  
Sbjct: 75  KHPSATASSRSNRFPEISTS-DALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAG 134

Query: 133 --------KTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSLL 192
                   + PFDCAVCLCEF  +DKLRLLP CSHAFH  CIDTWL S+STCPLCR +L 
Sbjct: 135 GGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL- 194

Query: 193 PDHFAPHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNPISGSNSQMGLDEDRELET 252
              F+P  S       +E+      DI +D E   G T     +GS   M   E +E+  
Sbjct: 195 ---FSPGFS-------MENPMFDFDDIREDEE---GVTE----NGSQKTM---EIQEIVV 254

Query: 253 GSGEIGKLEDSNATVVTVKLGKYK---NVESGE------GGSSENKNVDSRRCFSMGSFE 312
             G           V+ V+LGK+K   NV +G+      GG + + N+D+RRCFSMGS++
Sbjct: 255 EKG-----------VLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQ 314

Query: 313 YVMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGFEPGENG 372
           Y++  NS +KV   N        R P L             D ES         + G + 
Sbjct: 315 YILG-NSELKVPFAN-------DRLPRL----------KPQDKESE--------QTGNSS 351

Query: 373 NTNSNKIEK-KRIESFSISKIWLRGKKARESSTDWSRRAVS 387
           + ++ KI    + ESFS+SKIWL  KK + SS D  RR  S
Sbjct: 375 SEDNKKINTVAKGESFSVSKIWLWPKKDKFSS-DAQRRLPS 351

[Close]

BLAST of MS002287 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-51
Identity = 146/393 (37.15%), Postives = 199/393 (50.64%), Query Frame = 0


Query: 5   LLQVNGRIFPSPPQLQPYYVASQPPPLAQSSGFNLENKVSPSLLLIIIILAIVFFVSGLL 64
           L Q++    PSP  L      S     + SSG N  N++SP +L II++L+++FF+  +L
Sbjct: 16  LNQISPSSAPSPITLNHQLTDSSS---SSSSGGN--NRISPIILFIIVLLSVIFFICSIL 75

Query: 65  HLLVRF--------LWTPPLQ--RDPESSDSATAFQGQLQQLFHLHDSGVDQSFIDTLPV 124
           HLLVR+        L + P +  ++PE SDS T +Q QLQQLFHLHDSG+DQ+ ID LPV
Sbjct: 76  HLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDT-YQRQLQQLFHLHDSGLDQALIDALPV 135

Query: 125 FHYKAIIGSKTPFDCAVCLCEFEAEDKLRLLPKCSHAFHTECIDTWLLSHSTCPLCRSSL 184
           F YK I G+K PFDCAVCLCEF  +DKLRLLP CSHAFH +CIDTWLLS+STCPLCR +L
Sbjct: 136 FLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL 195

Query: 185 LPDHFAPHASCAPIVLVLESGSESSRDIVDDREAAIGRTNPNP------ISGSNSQMGLD 244
                                             ++G     P       +G +   G+ 
Sbjct: 196 F---------------------------------SLGHQFEYPDFNFGFFAGDDGGGGVR 255

Query: 245 EDRELETGSGEIGKLEDSNATVVTVKLGKYKN---VESGE-----GGSSENKNVDSRRCF 304
                +    EIGK       V +V+LGK+++   V +GE     GG + + ++D+RRCF
Sbjct: 256 VSPVQKPAENEIGK------RVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCF 315

Query: 305 SMGSFEYVMDENSSVKVAIINTPAKKQGSRKPALPLTPGYRAAMSECDCESRREFKLGGF 364
           SMGS++Y++ E S + VA+                                         
Sbjct: 316 SMGSYQYIVAE-SDLVVALC---------------------------------------- 321

Query: 365 EPGENGNTNSNKIEKKRI------ESFSISKIW 368
            P   G  N+  +E K+I      ESFS+SKIW
Sbjct: 376 -PNNEGLKNNKDVEGKKINMRSKGESFSVSKIW 321

[Close]

BLAST of MS002287 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-44
Identity = 94/169 (55.62%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 37  FNLENKVSPSLLLIIIILAIVFFVSGLLHLLVRFLWTPPLQRDPE---SSDSATAFQGQL 96
           F+L   +SP +LL I +L+I+FFV+ L+HLLV+FL  P  + D      ++S+TA QG+ 
Sbjct: 26  FDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRY 85

Query: 97  QQLFHLHDSGVDQSFIDTLPVFHYKAIIGSKTPF-DCAVCLCEFEAEDKLRLLPKCSHAF 156
           Q  F+LHD+ +DQSFID LP+ HYK +IG +    DCAVCL EF AED+LRLLPKCSHAF
Sbjct: 86  QTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAF 145

Query: 157 HTECIDTWLLSHSTCPLCRSSLLPDHFAPHASCAPIVLVLESGSESSRD 202
           H ECIDTWLL++STCPLCR +LL       AS + IVLV ES  ++S+D
Sbjct: 146 HVECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQD 194

The following BLAST results are available for this feature:

BLAST of MS002287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134692.1	2.1e-260	99.78	RING-H2 finger protein ATL13 [Momordica charantia]	[more]
XP_022973668.1	2.6e-202	78.69	RING-H2 finger protein ATL13-like [Cucurbita maxima]	[more]
XP_023529524.1	2.2e-201	78.27	RING-H2 finger protein ATL13-like [Cucurbita pepo subsp. pepo]	[more]
KAG7035715.1	1.4e-200	78.27	RING-H2 finger protein ATL13, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022928975.1	2.0e-199	78.27	RING-H2 finger protein ATL13-like [Cucurbita moschata]	[more]

BLAST of MS002287 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940Q4	9.1e-102	50.43	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	1.2e-90	45.59	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q9FL07	1.8e-57	42.89	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	1.6e-50	37.15	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9FHG8	2.5e-43	55.62	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]

BLAST of MS002287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0B0	1.0e-260	99.78	RING-H2 finger protein ATL13 OS=Momordica charantia OX=3673 GN=LOC111006899 PE=4...	[more]
A0A6J1IDU5	1.2e-202	78.69	RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111472249 PE...	[more]
A0A6J1ESY3	9.8e-200	78.27	RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111435713 ...	[more]
A0A5D3BAM4	2.7e-197	78.74	RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SX57	3.5e-197	78.86	RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of MS002287 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30400.1	6.5e-103	50.43	RING/U-box superfamily protein	[more]
AT2G18650.1	8.8e-92	45.59	RING/U-box superfamily protein	[more]
AT5G40250.1	1.3e-58	42.89	RING/U-box superfamily protein	[more]
AT1G23980.1	1.2e-51	37.15	RING/U-box superfamily protein	[more]
AT5G57750.1	1.8e-44	55.62	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..170 e-value: 1.7E-6 score: 37.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 128..171 e-value: 4.5E-13 score: 49.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..171 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 103..176 e-value: 1.7E-21 score: 77.2
None	No IPR available	PANTHER	PTHR45768:SF53	ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED	coord: 20..380
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 20..380
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 128..171 e-value: 5.62306E-21 score: 83.5053
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002287.1	MS002287.1	mRNA