MS001892 (gene) Bitter gourd (TR) v1

Overview


Name	MS001892
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Golgin subfamily A member 6-like protein 2
Location	scaffold30: 752717 .. 753553 (+)
RNA-Seq Expression	MS001892
Synteny	MS001892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCATGCTCAAGCAAAGATGGCAGTGAGTTTTGTGATGATGATGTTAGAGAATTGAAAGAAAAGATAAGACTACTCAGGGAGGAAGTGAGGGGAGTGATGTCTGAGATGGATAAGGAGACTAAAGCCCATGAGAAAGACATGGTGGTTTTCGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAGGTGAAGGTGTTGAGGAAGAAGGTAGACGAGAGGATGAAAGACATTGAAGAGGGAAAATCTGGAGAGAAAATTGCAACAGAATGGGAGATGGTGGGAAGTACAAATGCCATCTTTGAACAGATACAGCAGGAAAGAGCACGCAGAGATGAAGCCATTGACAAATGGAAGCAACTTTATCACGCTATCAAGATGGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGGCTATTAACTTTTCTCTTCCTCTAGTCATCACAAACAATACAATTTTCCCTTGGTTTCTGAATTTTCTGTTGATCGTCTTTCAATTTACTACTTTAAGCTCAAGATTAGATCAGTGAAGGCTAGCAAAAACTATTACTAAAAAAATTCAATAAATGCACATTAGATATTCCATCACTAAAAGGCCCTCATCAATTGCTTTGATAGGAGATGGATTGTATTGGGGAGCGGATGAGAGGGCAGAAGCACTAAAAACAGAATTGCAAGCAAAGGAAGAGACCATAAAAGCCCTCAAAGAAAAAGTAGTTTCAATGGAGCATGAAAAATATGAGAGGGACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCCTGACGAGTAAGAAGGAACAACAGATT

mRNA sequence

ATGGGTGCATGCTCAAGCAAAGATGGCAGTGAGTTTTGTGATGATGATGTTAGAGAATTGAAAGAAAAGATAAGACTACTCAGGGAGGAAGTGAGGGGAGTGATGTCTGAGATGGATAAGGAGACTAAAGCCCATGAGAAAGACATGGTGGTTTTCGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAGGTGAAGGTGTTGAGGAAGAAGGTAGACGAGAGGATGAAAGACATTGAAGAGGGAAAATCTGGAGAGAAAATTGCAACAGAATGGGAGATGGTGGGAAGTACAAATGCCATCTTTGAACAGATACAGCAGGAAAGAGCACGCAGAGATGAAGCCATTGACAAATGGAAGCAACTTTATCACGCTATCAAGATGGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTGTATTGGGGAGCGGATGAGAGGGCAGAAGCACTAAAAACAGAATTGCAAGCAAAGGAAGAGACCATAAAAGCCCTCAAAGAAAAAGTAGTTTCAATGGAGCATGAAAAATATGAGAGGGACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCCTGACGAGTAAGAAGGAACAACAGATT

Coding sequence (CDS)

ATGGGTGCATGCTCAAGCAAAGATGGCAGTGAGTTTTGTGATGATGATGTTAGAGAATTGAAAGAAAAGATAAGACTACTCAGGGAGGAAGTGAGGGGAGTGATGTCTGAGATGGATAAGGAGACTAAAGCCCATGAGAAAGACATGGTGGTTTTCGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAGGTGAAGGTGTTGAGGAAGAAGGTAGACGAGAGGATGAAAGACATTGAAGAGGGAAAATCTGGAGAGAAAATTGCAACAGAATGGGAGATGGTGGGAAGTACAAATGCCATCTTTGAACAGATACAGCAGGAAAGAGCACGCAGAGATGAAGCCATTGACAAATGGAAGCAACTTTATCACGCTATCAAGATGGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTGTATTGGGGAGCGGATGAGAGGGCAGAAGCACTAAAAACAGAATTGCAAGCAAAGGAAGAGACCATAAAAGCCCTCAAAGAAAAAGTAGTTTCAATGGAGCATGAAAAATATGAGAGGGACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCCTGACGAGTAAGAAGGAACAACAGATT

Protein sequence

MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSMEHEKYERDREIDILRQSLRILTSKKEQQI

Homology

[Close]

BLAST of MS001892 vs. NCBI nr
Match: XP_022134638.1 (uncharacterized protein PF11_0207-like [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 5.4e-107
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMD+ETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDEETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA
Sbjct: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM
Sbjct: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           EHEKYERDREIDILRQSLRILTSKKEQQI
Sbjct: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 209

[Close]

BLAST of MS001892 vs. NCBI nr
Match: XP_038879675.1 (uncharacterized protein LOC120071454 [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 3.9e-89
Identity = 177/209 (84.69%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE  +D+V+ LKEKIRLLREEVRGVMS MDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIYEDEVKGLKEKIRLLREEVRGVMSVMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+LKEEVK+LRKKV E + +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           I+KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKTEL+AKEETIKALKE+VVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGASERTEALKTELEAKEETIKALKEEVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E EKY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. NCBI nr
Match: XP_004138095.1 (uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical protein Csa_013066 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 9.6e-88
Identity = 175/209 (83.73%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+LKEEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           I+KWKQLYHAIK+ELDDLIQRTHNGDGL+WG  ER EALKT+LQAKEETIKALKE+VVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. NCBI nr
Match: XP_008464528.1 (PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo] >TYJ98513.1 golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 6.2e-87
Identity = 172/209 (82.30%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           ++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. NCBI nr
Match: XP_023530768.1 (uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 173/209 (82.78%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSK GS  CDDDV  LKEKIRLLREEVRGVMSEMDKE KAHEKDMV+FAFKEA WK
Sbjct: 1   MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDKEVKAHEKDMVMFAFKEADWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKKKL+EEVK+LRKKV ERM +IEEG  GEK ATEWE+  + N IFEQIQQERARRDEA
Sbjct: 61  TEKKKLREEVKMLRKKVKERMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           I+KWKQLYHAIK+ELDDLIQRTHNGDGLYWGA+ER EAL+TEL AKEETIKALKE+V SM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E EKY+RD EIDILRQSLRI+TSKKE+QI
Sbjct: 181 EQEKYKRDTEIDILRQSLRIMTSKKEKQI 209

[Close]

BLAST of MS001892 vs. ExPASy TrEMBL
Match: A0A6J1C2K1 (uncharacterized protein PF11_0207-like OS=Momordica charantia OX=3673 GN=LOC111006859 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.6e-107
Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMD+ETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDEETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA
Sbjct: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM
Sbjct: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           EHEKYERDREIDILRQSLRILTSKKEQQI
Sbjct: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 209

[Close]

BLAST of MS001892 vs. ExPASy TrEMBL
Match: A0A0A0LS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88
Identity = 175/209 (83.73%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+LKEEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           I+KWKQLYHAIK+ELDDLIQRTHNGDGL+WG  ER EALKT+LQAKEETIKALKE+VVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. ExPASy TrEMBL
Match: A0A5D3BGY2 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001180 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.0e-87
Identity = 172/209 (82.30%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           ++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. ExPASy TrEMBL
Match: A0A1S3CLU2 (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.0e-87
Identity = 172/209 (82.30%), Postives = 191/209 (91.39%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           ++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. ExPASy TrEMBL
Match: A0A5A7UW79 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001160 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.5e-86
Identity = 171/209 (81.82%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSE   DDV+ LKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVREVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRDEA 120
           TEKK+L+EEVK+LRKKV E   +IEEG  GEKIATEWEM G+ N IFEQIQQERARRDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADERAEALKTELQAKEETIKALKEKVVSM 180
           ++KWKQLYHAIK+ELDDLIQRTHNGDGL+WGA ER EALKT+LQAKEETIK+LKE+VVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EHEKYERDREIDILRQSLRILTSKKEQQI 210
           E +KY+R+REIDILRQSLRI+TSKKEQQI
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQI 209

[Close]

BLAST of MS001892 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 92/223 (41.26%), Postives = 130/223 (58.30%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--G 60
           MG C+SK         VR +KE  +      R ++ E D+  K     ++    KEA   
Sbjct: 1   MGGCTSKQERR----GVRSVKETSKDQSRGRRHLIKERDEREK-----VMFLQLKEAERE 60

Query: 61  WKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATE-WEMVGSTNAIFEQIQQERARR 120
           W+ E+KKL+EEV+ LRKK++ER    EE K+      E W+ V       E++  ERA R
Sbjct: 61  WRKERKKLREEVRRLRKKLEER----EEAKTTTTEEREYWKWV------VEEMCVERAVR 120

Query: 121 DEAIDKWKQLYHAIKMELDDLIQRTHNGDG-------LYWGADE-----RAEALKTELQA 180
           DEA++KWKQLY AIK ELD LI  T +  G       L    +E     R E L+ E++ 
Sbjct: 121 DEAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRV 180

Query: 181 KEETIKALKEKVVSMEHEKYERDREIDILRQSLRILTSKKEQQ 209
           KEET++ L+E++V M+ +KYE++REID+LRQSLRIL SKK+++
Sbjct: 181 KEETVETLEEQIVLMDRQKYEKEREIDLLRQSLRILGSKKKKK 204

[Close]

BLAST of MS001892 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 83/207 (40.10%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 1   MGACSSKDGSEFCDDDVRELKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAG 60
           MG  +SKD     + +  + + K++   +  R    E+D      EK+ V+ A K  E  
Sbjct: 1   MGGSTSKD-----ERNSSKRRIKVKANEQRRRETRRELD------EKERVILALKMAETE 60

Query: 61  WKTEKKKLKEEVKVLRKKVDERMKDIEEGKSGEKIATEWEMVGSTNAIFEQIQQERARRD 120
           W+ E+K+L+EEVK LR+K++E+    EEGK+ +    EWE V       EQ+  ERA R+
Sbjct: 61  WRKERKRLREEVKRLRQKMEEK----EEGKAKQH---EWEWV------VEQMCLERAVRE 120

Query: 121 EAIDKWKQLYHAIKMELDDLIQRTHNGDGLYWGADER----AEALKTELQAKEETIKALK 180
           EA+++WKQLY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK
Sbjct: 121 EAVERWKQLYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLK 180

Query: 181 EKVVSMEHEKYERDREIDILRQSLRIL 202
            ++  ME ++  ++REID+LRQSLRIL
Sbjct: 181 GRINLMEKQQNGKEREIDLLRQSLRIL 182

The following BLAST results are available for this feature:

BLAST of MS001892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134638.1	5.4e-107	99.52	uncharacterized protein PF11_0207-like [Momordica charantia]	[more]
XP_038879675.1	3.9e-89	84.69	uncharacterized protein LOC120071454 [Benincasa hispida]	[more]
XP_004138095.1	9.6e-88	83.73	uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical ...	[more]
XP_008464528.1	6.2e-87	82.30	PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo] >TYJ98513.1 golgi...	[more]
XP_023530768.1	1.8e-86	82.78	uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001892 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2K1	2.6e-107	99.52	uncharacterized protein PF11_0207-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LS07	4.6e-88	83.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1	[more]
A0A5D3BGY2	3.0e-87	82.30	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLU2	3.0e-87	82.30	uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=...	[more]
A0A5A7UW79	2.5e-86	81.82	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of MS001892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23930.1	1.0e-26	41.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G13540.1	1.4e-23	40.10	unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	COILS	Coil	Coil	coord: 10..37
None	No IPR available	COILS	Coil	Coil	coord: 156..183
None	No IPR available	PANTHER	PTHR37226:SF4	GOLGIN FAMILY A PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR37226	GOLGIN FAMILY A PROTEIN	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001892.1	MS001892.1	mRNA