MS001810 (gene) Bitter gourd (TR) v1

Overview


Name	MS001810
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ABC transporter F family member 4-like
Location	scaffold30: 189043 .. 189966 (-)
RNA-Seq Expression	MS001810
Synteny	MS001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTCCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGGTGAGCTCACGAATCACTTTTACGAATATCCATTTTGCAATTATGAGACCAAGCACATATTTTGCAGTTGAAATCAAAGACGATGCTGCTAAGGATAGGGAAGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGTACGCCTGCCCACCATACCTATACTTCCTCTCAACTTATATAACTCACGTTTCTCACATTCTTGATCTGACAGGCCCAAGACAGCAAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATCAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCT

mRNA sequence

ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTCCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGTTGAAATCAAAGACGATGCTGCTAAGGATAGGGAAGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATCAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCT

Coding sequence (CDS)

ATGGGGTGCGGAAACTCGAGGCTTATCCCGGATGGAGAGTCGATTCCTGCCCGGATTCGCCCACTTATGCGCCTTAGATTTCCGGATTTGAGGAGGCGTAAGAACGGAAGCAATCTGGAGACTGGAACGCTCTCGAAGAAAGTGCTTCTCAAAGATCACGAAGACAACTCTACCTCTATGCATGTTATTGATAAAAAAAGCGTATCTTTTTCATCTTATTCTTCACCTAGTGGCAGCACCAAACCTGCACCTGCACCTGCACCTGCACACATCAACAAACAGGACAACAAGGACGATGAAGATTATTCACCAATTCCCATTCCCCTCTCTAGCAACAATGCAATCAAAGAGGACCTCCATGAAGACCACAACAAGAAATCAGGAGAAGATCACATCGAAGACACTGCTCGGTCCATCATCTGTCCTGGATCCCCCAGTTTCAGAGTTTATTTCGTTGAAGAAGAAGATGATGACAAAGCAAGCGTTGAAATCAAAGACGATGCTGCTAAGGATAGGGAAGATGTCTCGCACAACAACTCCCCAACCCATGACAGAATCGACACCACCACCACCACCACCACTTGTGCAAATTTTGGCCAGGTGATCATAACGAAAGGAAAAGAAGGATCCAGGAGTTGTACAAAGGCCATCAGTAGTAAGAAAAGACAAGGTGGTGTAAGGAATCTGTTGAATGTCAAATCTTGCTACCATTTACGTTGTTCTGGCAACGACAGATCCACTCAGCTTCTTGCTAGAAAAGCTCAAGCT

Protein sequence

MGCGNSRLIPDGESIPARIRPLMRLRFPDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLHEDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTTTTTCANFGQVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSCYHLRCSGNDRSTQLLARKAQA

Homology

[Close]

BLAST of MS001810 vs. NCBI nr
Match: XP_022135203.1 (uncharacterized protein LOC111007223 isoform X1 [Momordica charantia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.4e-127
Identity = 246/261 (94.25%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLMRLRFPDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
           MGCGNSRLIPDGESIPARIRPLMRLRF DLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1   MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60

Query: 61  HVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120
           HVIDKKSVSFSSYSSPSGSTK  PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH
Sbjct: 61  HVIDKKSVSFSSYSSPSGSTK--PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120

Query: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNS 180
           EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD       DVSHNNS
Sbjct: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-------DVSHNNS 180

Query: 181 PTHDRIDTTTTTTTCANFGQ-----VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240
           PTHDRIDTTTTTTTCANFGQ     VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC
Sbjct: 181 PTHDRIDTTTTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240

Query: 241 YHLRCSGNDRSTQLLARKAQA 257
           YHLRCSGNDRSTQLLARKAQA
Sbjct: 241 YHLRCSGNDRSTQLLARKAQA 252

[Close]

BLAST of MS001810 vs. NCBI nr
Match: XP_022135204.1 (uncharacterized protein LOC111007223 isoform X2 [Momordica charantia])

HSP 1 Score: 454.9 bits (1169), Expect = 4.6e-124
Identity = 241/261 (92.34%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLMRLRFPDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
           MGCGNSRLIPDGESIPARIRPLMRLRF DLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1   MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60

Query: 61  HVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120
           HVIDKKSVSFSSYSSPSGSTK  PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH
Sbjct: 61  HVIDKKSVSFSSYSSPSGSTK--PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120

Query: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNS 180
           EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS           +DVSHNNS
Sbjct: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS-----------DDVSHNNS 180

Query: 181 PTHDRIDTTTTTTTCANFGQ-----VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240
           PTHDRIDTTTTTTTCANFGQ     VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC
Sbjct: 181 PTHDRIDTTTTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240

Query: 241 YHLRCSGNDRSTQLLARKAQA 257
           YHLRCSGNDRSTQLLARKAQA
Sbjct: 241 YHLRCSGNDRSTQLLARKAQA 248

[Close]

BLAST of MS001810 vs. NCBI nr
Match: XP_008464387.1 (PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-37
Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLM-RLRFPDLRRRKNGSNLETGTLSKKVLLKD------- 60
           MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L  G LSKKVLLK+       
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  -------HEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPI 120
                  HE  ST      + +++ ++    + ++   P+   A+  K   + +      
Sbjct: 67  AMFVDNRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEEE 126

Query: 121 PIP----------------------LSSNNAIKEDLHEDHNKKSGED---HIEDTARSII 180
           P P                      ++ +  I+E   +++NKK GED     E+   SII
Sbjct: 127 PRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEG--DENNKKEGEDGRPDNEENRGSII 186

Query: 181 CPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTTTTTCANFGQ 240
           CPGSPSFR YFVEE  DDK  VE+KD  A    DVSH  SP+HD +++TT+  +      
Sbjct: 187 CPGSPSFRFYFVEETQDDKEKVEMKD--AGGMGDVSHKKSPSHDSVESTTSAKSGEGQEN 246

Query: 241 VIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQLLARKAQA 257
            +I KGK+G+ +  + IS ++    GV+NLLNVKSCYHL CSGNDR+  LLARKA+A
Sbjct: 247 KVIKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NLLARKAEA 297

[Close]

BLAST of MS001810 vs. NCBI nr
Match: KAA0057746.1 (ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-37
Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLM-RLRFPDLRRRKNGSNLETGTLSKKVLLKD------- 60
           MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L  G LSKKVLLK+       
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  -------HEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPI 120
                  HE  ST      + +++ ++    + ++   P+   A+  K   + +      
Sbjct: 61  AMFVDNRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEEE 120

Query: 121 PIP----------------------LSSNNAIKEDLHEDHNKKSGED---HIEDTARSII 180
           P P                      ++ +  I+E   +++NKK GED     E+   SII
Sbjct: 121 PRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEG--DENNKKEGEDGRPDNEENRGSII 180

Query: 181 CPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTTTTTCANFGQ 240
           CPGSPSFR YFVEE  DDK  VE+KD  A    DVSH  SP+HD +++TT+  +      
Sbjct: 181 CPGSPSFRFYFVEETQDDKEKVEMKD--AGGMGDVSHKKSPSHDSVESTTSAKSGEGQEN 240

Query: 241 VIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQLLARKAQA 257
            +I KGK+G+ +  + IS ++    GV+NLLNVKSCYHL CSGNDR+  LLARKA+A
Sbjct: 241 KVIKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NLLARKAEA 291

[Close]

BLAST of MS001810 vs. NCBI nr
Match: XP_011649820.1 (probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-36
Identity = 128/308 (41.56%), Postives = 162/308 (52.60%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPL-MRLRFPDLRRRKNGSNLETGTLSKKVLLKDHE-DNST 60
           MGCGNS+L P GE +P RIRPL +R +  +LR+RKNG++L  G LSKKVLLKD E +   
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA---- 120
           +MHV ++            GSTK     +  H N  +   DE  S   IP S+NNA    
Sbjct: 61  AMHVDNRHE---------CGSTK--CLASQQHTNNNNATKDEHNSASTIPPSNNNASATK 120

Query: 121 -------------------------------IKEDL----------HEDHNKKSGED--- 180
                                          +K+D            +++NKK GED   
Sbjct: 121 TGEQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRP 180

Query: 181 HIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTT 240
             E+   S ICPGSPSFR+YFVEE  DDK  VE+KD  A    DVSH  SP+ D +++TT
Sbjct: 181 DNEENRGSFICPGSPSFRLYFVEETQDDKEKVEMKD--ASGMGDVSHKKSPSRDSVESTT 240

Query: 241 TTTTCANFGQVIITKGKEGSRSCTKAISSKKR--QGGVRNLLNVKSCYHLRCSGNDRSTQ 257
           +           I KGK+   +    + SKKR    GV+NLLNVKSCYHL CSGNDR+  
Sbjct: 241 SAKCDEGQENKAIKKGKK--ETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRA-N 292

[Close]

BLAST of MS001810 vs. ExPASy TrEMBL
Match: A0A6J1C458 (uncharacterized protein LOC111007223 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007223 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.1e-127
Identity = 246/261 (94.25%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLMRLRFPDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
           MGCGNSRLIPDGESIPARIRPLMRLRF DLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1   MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60

Query: 61  HVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120
           HVIDKKSVSFSSYSSPSGSTK  PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH
Sbjct: 61  HVIDKKSVSFSSYSSPSGSTK--PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120

Query: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNS 180
           EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD       DVSHNNS
Sbjct: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKD-------DVSHNNS 180

Query: 181 PTHDRIDTTTTTTTCANFGQ-----VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240
           PTHDRIDTTTTTTTCANFGQ     VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC
Sbjct: 181 PTHDRIDTTTTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240

Query: 241 YHLRCSGNDRSTQLLARKAQA 257
           YHLRCSGNDRSTQLLARKAQA
Sbjct: 241 YHLRCSGNDRSTQLLARKAQA 252

[Close]

BLAST of MS001810 vs. ExPASy TrEMBL
Match: A0A6J1C0S3 (uncharacterized protein LOC111007223 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007223 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.2e-124
Identity = 241/261 (92.34%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLMRLRFPDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60
           MGCGNSRLIPDGESIPARIRPLMRLRF DLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM
Sbjct: 1   MGCGNSRLIPDGESIPARIRPLMRLRFSDLRRRKNGSNLETGTLSKKVLLKDHEDNSTSM 60

Query: 61  HVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120
           HVIDKKSVSFSSYSSPSGSTK  PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH
Sbjct: 61  HVIDKKSVSFSSYSSPSGSTK--PAPAPAHINKQDNKDDEDYSPIPIPLSSNNAIKEDLH 120

Query: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNS 180
           EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS           +DVSHNNS
Sbjct: 121 EDHNKKSGEDHIEDTARSIICPGSPSFRVYFVEEEDDDKAS-----------DDVSHNNS 180

Query: 181 PTHDRIDTTTTTTTCANFGQ-----VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240
           PTHDRIDTTTTTTTCANFGQ     VIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC
Sbjct: 181 PTHDRIDTTTTTTTCANFGQAQDSKVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKSC 240

Query: 241 YHLRCSGNDRSTQLLARKAQA 257
           YHLRCSGNDRSTQLLARKAQA
Sbjct: 241 YHLRCSGNDRSTQLLARKAQA 248

[Close]

BLAST of MS001810 vs. ExPASy TrEMBL
Match: A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLM-RLRFPDLRRRKNGSNLETGTLSKKVLLKD------- 60
           MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L  G LSKKVLLK+       
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  -------HEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPI 120
                  HE  ST      + +++ ++    + ++   P+   A+  K   + +      
Sbjct: 61  AMFVDNRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEEE 120

Query: 121 PIP----------------------LSSNNAIKEDLHEDHNKKSGED---HIEDTARSII 180
           P P                      ++ +  I+E   +++NKK GED     E+   SII
Sbjct: 121 PRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEG--DENNKKEGEDGRPDNEENRGSII 180

Query: 181 CPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTTTTTCANFGQ 240
           CPGSPSFR YFVEE  DDK  VE+KD  A    DVSH  SP+HD +++TT+  +      
Sbjct: 181 CPGSPSFRFYFVEETQDDKEKVEMKD--AGGMGDVSHKKSPSHDSVESTTSAKSGEGQEN 240

Query: 241 VIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQLLARKAQA 257
            +I KGK+G+ +  + IS ++    GV+NLLNVKSCYHL CSGNDR+  LLARKA+A
Sbjct: 241 KVIKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NLLARKAEA 291

[Close]

BLAST of MS001810 vs. ExPASy TrEMBL
Match: A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPLM-RLRFPDLRRRKNGSNLETGTLSKKVLLKD------- 60
           MGCGNS+L P+GE +P RIRPL+ R +F +LR+RKNG++L  G LSKKVLLK+       
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  -------HEDNSTSMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPI 120
                  HE  ST      + +++ ++    + ++   P+   A+  K   + +      
Sbjct: 67  AMFVDNRHECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEEE 126

Query: 121 PIP----------------------LSSNNAIKEDLHEDHNKKSGED---HIEDTARSII 180
           P P                      ++ +  I+E   +++NKK GED     E+   SII
Sbjct: 127 PRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEG--DENNKKEGEDGRPDNEENRGSII 186

Query: 181 CPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTTTTTCANFGQ 240
           CPGSPSFR YFVEE  DDK  VE+KD  A    DVSH  SP+HD +++TT+  +      
Sbjct: 187 CPGSPSFRFYFVEETQDDKEKVEMKD--AGGMGDVSHKKSPSHDSVESTTSAKSGEGQEN 246

Query: 241 VIITKGKEGSRSCTKAISSKKRQG-GVRNLLNVKSCYHLRCSGNDRSTQLLARKAQA 257
            +I KGK+G+ +  + IS ++    GV+NLLNVKSCYHL CSGNDR+  LLARKA+A
Sbjct: 247 KVIKKGKKGT-TFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRA-NLLARKAEA 297

[Close]

BLAST of MS001810 vs. ExPASy TrEMBL
Match: A0A0A0LNT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.0e-37
Identity = 128/308 (41.56%), Postives = 162/308 (52.60%), Query Frame = 0


Query: 1   MGCGNSRLIPDGESIPARIRPL-MRLRFPDLRRRKNGSNLETGTLSKKVLLKDHE-DNST 60
           MGCGNS+L P GE +P RIRPL +R +  +LR+RKNG++L  G LSKKVLLKD E +   
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SMHVIDKKSVSFSSYSSPSGSTKPAPAPAPAHINKQDNKDDEDYSPIPIPLSSNNA---- 120
           +MHV ++            GSTK     +  H N  +   DE  S   IP S+NNA    
Sbjct: 61  AMHVDNRHE---------CGSTK--CLASQQHTNNNNATKDEHNSASTIPPSNNNASATK 120

Query: 121 -------------------------------IKEDL----------HEDHNKKSGED--- 180
                                          +K+D            +++NKK GED   
Sbjct: 121 TGEQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRP 180

Query: 181 HIEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTT 240
             E+   S ICPGSPSFR+YFVEE  DDK  VE+KD  A    DVSH  SP+ D +++TT
Sbjct: 181 DNEENRGSFICPGSPSFRLYFVEETQDDKEKVEMKD--ASGMGDVSHKKSPSRDSVESTT 240

Query: 241 TTTTCANFGQVIITKGKEGSRSCTKAISSKKR--QGGVRNLLNVKSCYHLRCSGNDRSTQ 257
           +           I KGK+   +    + SKKR    GV+NLLNVKSCYHL CSGNDR+  
Sbjct: 241 SAKCDEGQENKAIKKGKK--ETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRA-N 292

[Close]

BLAST of MS001810 vs. TAIR 10
Match: AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 72/257 (28.02%), Postives = 109/257 (42.41%), Query Frame = 0


Query: 1   MGCGNSRL-------IPDG--ESIPARIRPLMRLRFPDLRRRKNGSNLE-TGTLSKKVLL 60
           MGCG SRL         +G    +PA IRPL+R R  ++++R +   L+ + TLSKK LL
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRRRLEEMKKRSHAGVLKGSQTLSKKELL 60

Query: 61  K--------DHEDNSTSM------------HVIDKKSVSFSSYSSPSGSTKPAPAPAPAH 120
           +        D E+N  S+            +V +KK V +    S     +         
Sbjct: 61  RHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKE---VKEEVV 120

Query: 121 INKQDNKDDEDYSPIPIPLSSNN--AIKEDLHEDHN--------KKSGED---------H 180
           +NKQ+  +D  +  +       N   +K+   E+H+        KK G+D          
Sbjct: 121 VNKQE--EDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEGS 180

Query: 181 IEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTT 209
           I +    +I PGSPSFRVY V+   DD       DD  KD ED   +       ++T + 
Sbjct: 181 INNFDERMIGPGSPSFRVYCVDVPSDD-------DDEEKDVEDARKS-------METESV 238

[Close]

BLAST of MS001810 vs. TAIR 10
Match: AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 4.1e-06
Identity = 84/306 (27.45%), Postives = 127/306 (41.50%), Query Frame = 0


Query: 1   MGCGNSRL-------IPDG--ESIPARIRPLMRLRFPDLRRRKNGSNLE-TGTLSKKVLL 60
           MGCG SRL         +G    +PA IRPL+R R  ++++R +   L+ + TLSKK LL
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLLRRRLEEMKKRSHAGVLKGSQTLSKKELL 60

Query: 61  K--------DHEDNSTSM------------HVIDKKSVSFSSYSSPSGSTKPAPAPAPAH 120
           +        D E+N  S+            +V +KK V +    S     +         
Sbjct: 61  RHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKE---VKEEVV 120

Query: 121 INKQDNKDDEDYSPIPIPLSSNN--AIKEDLHEDHN--------KKSGED---------H 180
           +NKQ+  +D  +  +       N   +K+   E+H+        KK G+D          
Sbjct: 121 VNKQE--EDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEGS 180

Query: 181 IEDTARSIICPGSPSFRVYFVEEEDDDKASVEIKDDAAKDREDVSHNNSPTHDRIDTTTT 240
           I +    +I PGSPSFRVY V+   DD       DD  KD ED   +       ++T + 
Sbjct: 181 INNFDERMIGPGSPSFRVYCVDVPSDD-------DDEEKDVEDARKS-------METESV 240

Query: 241 TTTCANFGQVIITKGKEGSRSCTKAISSKKRQGGVRNLLNVKS-CY-HLRCSGNDRSTQL 256
           TT        I+ K K+  R     I+  ++      L NV + CY    C GN  S  +
Sbjct: 241 TTEIKEVDGSIVKKEKKERRGKRFGIALPRKY-----LANVTAPCYAGGGCMGNTHSRLV 282

The following BLAST results are available for this feature:

BLAST of MS001810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135203.1	4.4e-127	94.25	uncharacterized protein LOC111007223 isoform X1 [Momordica charantia]	[more]
XP_022135204.1	4.6e-124	92.34	uncharacterized protein LOC111007223 isoform X2 [Momordica charantia]	[more]
XP_008464387.1	2.5e-37	40.07	PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo]	[more]
KAA0057746.1	2.5e-37	40.07	ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 AB...	[more]
XP_011649820.1	1.2e-36	41.56	probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus...	[more]

BLAST of MS001810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C458	2.1e-127	94.25	uncharacterized protein LOC111007223 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C0S3	2.2e-124	92.34	uncharacterized protein LOC111007223 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3BHA4	1.2e-37	40.07	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CLT6	1.2e-37	40.07	uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=...	[more]
A0A0A0LNT2	6.0e-37	41.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1	[more]

BLAST of MS001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50830.1	2.4e-06	28.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50830.2	4.1e-06	27.45	unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001810.1	MS001810.1	mRNA