MS001800 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAACCAGAGACAGTTGATAAAGTGTGTTCAGTTGTGAGGAAACAATTGGCCTTGCCTGCCGAATCAGAGCTCACCCCTGAATCCAAGTTCTTAGCTCTGGGTGCCGACTCCCTCGACCTTGTATGTAATCCATCTCCACCTTTACGGCCACGGCCTTACCCTTTTCTATGCTCACACCAATCAACTGACAGGTGGAGATAATTATGGCCTTAGAGGAAGAATTTGACATCAATATCGAAGAGGATAACGCTCAGAACATAACCACCGTTCAAGAAGCTGCAGATTTGATCGAGGACCTCGTTGTTAACCCCAATCTT GCAAAACCAGAGACAGTTGATAAAGTGTGTTCAGTTGTGAGGAAACAATTGGCCTTGCCTGCCGAATCAGAGCTCACCCCTGAATCCAAGTTCTTAGCTCTGGGTGCCGACTCCCTCGACCTTGTGGAGATAATTATGGCCTTAGAGGAAGAATTTGACATCAATATCGAAGAGGATAACGCTCAGAACATAACCACCGTTCAAGAAGCTGCAGATTTGATCGAGGACCTCGTTGTTAACCCCAATCTT GCAAAACCAGAGACAGTTGATAAAGTGTGTTCAGTTGTGAGGAAACAATTGGCCTTGCCTGCCGAATCAGAGCTCACCCCTGAATCCAAGTTCTTAGCTCTGGGTGCCGACTCCCTCGACCTTGTGGAGATAATTATGGCCTTAGAGGAAGAATTTGACATCAATATCGAAGAGGATAACGCTCAGAACATAACCACCGTTCAAGAAGCTGCAGATTTGATCGAGGACCTCGTTGTTAACCCCAATCTT AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL Homology
BLAST of MS001800 vs. NCBI nr
Match: XP_022134996.1 (acyl carrier protein 4, chloroplastic-like [Momordica charantia]) HSP 1 Score: 155.2 bits (391), Expect = 2.4e-34 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MS001800 vs. NCBI nr
Match: XP_038879812.1 (acyl carrier protein 4, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 134.4 bits (337), Expect = 4.4e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.4 bits (337), Expect = 4.4e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo]) HSP 1 Score: 134.4 bits (337), Expect = 4.4e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.4e-23 Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of MS001800 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.4e-22 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of MS001800 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.4e-21 Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of MS001800 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.2e-21 Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of MS001800 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.2e-21 Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of MS001800 vs. ExPASy TrEMBL
Match: A0A6J1BZC7 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111007104 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MS001800 vs. ExPASy TrEMBL
Match: A0A5D3BIB6 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00190 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. ExPASy TrEMBL
Match: A0A6J1JI20 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. ExPASy TrEMBL
Match: E5GBM2 (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. ExPASy TrEMBL
Match: A0A6J1E6C1 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111429833 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28 Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of MS001800 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 ) HSP 1 Score: 104.4 bits (259), Expect = 4.6e-23 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of MS001800 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 ) HSP 1 Score: 97.1 bits (240), Expect = 7.3e-21 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of MS001800 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 ) HSP 1 Score: 96.7 bits (239), Expect = 9.5e-21 Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of MS001800 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 ) HSP 1 Score: 95.5 bits (236), Expect = 2.1e-20 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of MS001800 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 ) HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17 Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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