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MS001552 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAGGGGAAGAATAAAATGTTGAGAAAGTCAAGAACAAGAAGGTTGATGATTGGTTCAACAGCACCAACATGTACTTACAATGAATGTAGAGGTTGCAAATACAAGTGTAGAGCTGAGCAAGTACCTGTGGAAGGCAATGACCCTATCAATAGTGCTTACCACTATAGATGTGTTTGTCATAGG CTTCAGGGGAAGAATAAAATGTTGAGAAAGTCAAGAACAAGAAGGTTGATGATTGGTTCAACAGCACCAACATGTACTTACAATGAATGTAGAGGTTGCAAATACAAGTGTAGAGCTGAGCAAGTACCTGTGGAAGGCAATGACCCTATCAATAGTGCTTACCACTATAGATGTGTTTGTCATAGG CTTCAGGGGAAGAATAAAATGTTGAGAAAGTCAAGAACAAGAAGGTTGATGATTGGTTCAACAGCACCAACATGTACTTACAATGAATGTAGAGGTTGCAAATACAAGTGTAGAGCTGAGCAAGTACCTGTGGAAGGCAATGACCCTATCAATAGTGCTTACCACTATAGATGTGTTTGTCATAGG LQGKNKMLRKSRTRRLMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR Homology
BLAST of MS001552 vs. NCBI nr
Match: XP_022156765.1 (uncharacterized protein LOC111023601 [Momordica charantia]) HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of MS001552 vs. NCBI nr
Match: XP_007049616.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X1 [Theobroma cacao] >EOX93773.1 Stomagen [Theobroma cacao]) HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. NCBI nr
Match: XP_017974533.1 (PREDICTED: uncharacterized protein LOC18612649 isoform X2 [Theobroma cacao]) HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. NCBI nr
Match: XP_012490914.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Gossypium raimondii] >KJB42584.1 hypothetical protein B456_007G158800 [Gossypium raimondii]) HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. NCBI nr
Match: XP_016709292.2 (EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Gossypium hirsutum] >XP_017629965.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Gossypium arboreum] >KAB2057189.1 hypothetical protein ES319_A11G152400v1 [Gossypium barbadense] >TYI00857.1 hypothetical protein ES332_A11G161600v1 [Gossypium tomentosum] >TYJ09654.1 hypothetical protein E1A91_A11G155200v1 [Gossypium mustelinum] >KAG4174780.1 hypothetical protein ERO13_A11G141800v2 [Gossypium hirsutum] >KHG01239.1 epidermal patterning factor-like protein 9 [Gossypium arboreum]) HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. ExPASy Swiss-Prot
Match: Q9SV72 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EPFL9 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.9e-24 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of MS001552 vs. ExPASy TrEMBL
Match: A0A6J1DR94 (uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023601 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.2e-29 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of MS001552 vs. ExPASy TrEMBL
Match: A0A061DUW0 (Stomagen OS=Theobroma cacao OX=3641 GN=TCM_002693 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. ExPASy TrEMBL
Match: A0A0B0MP24 (EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 OS=Gossypium arboreum OX=29729 GN=LOC108472911 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. ExPASy TrEMBL
Match: A0A6J0ZIN1 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Herrania umbratica OX=108875 GN=LOC110409646 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. ExPASy TrEMBL
Match: A0A5D2NA41 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G161600v1 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.1e-24 Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0
BLAST of MS001552 vs. TAIR 10
Match: AT4G12970.1 (stomagen ) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-25 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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