MS001317 (gene) Bitter gourd (TR) v1

Overview


Name	MS001317
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-rich interactive domain-containing protein
Location	scaffold36: 3236054 .. 3237465 (+)
RNA-Seq Expression	MS001317
Synteny	MS001317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAGTGGATGCTGCACTGCACCTGCACTAGGTAATGCAATGGATGGACCATCTAAAGGTCTGAGAGTTGAAGACCAAGAAGCGAAAAAACAATGCTTACCGGAAAATTTCCCAAGTTCTAGCACATATGAAATGGACAACAGTACAGTTTGGTCCCAGAGAAGCATTGCATCAGCCAAGTCTCATGATTCCCACAGCAATATTGGGAGCAGTAGAGACTTTGTAAATTCTGGTATGTGCATGCTCATAAATCAGCCTGATGTTTTTATTTTTATTTTTTATTTATTTTGGATAAGCTGTCGATTCTTGAAACATACATACATTGGTTTATGATAAAGCTCCATTTTGCTTGTTCCTTCGGAGTTTCTCTCTCTACTGGGACGAGTGCTTCATTGGCAATCTTTTCATCTTGGCTCCTATAGCGGTGGTTCTAACATATATTTATCCTTTTCTTTCTGTTTTCTATGTCATCATTAAAGAAGGCATTTAGAAAAGGTTGTTCATGCATCATTCTTCTAAGTTCTATGCTCTTAATTGTTATAATTTACTACCGTCTGTTGCTGTTTTCTCTTTCTGATTTCAAATCTAATCCTCTGAGTCACCCGTCCATCGTGATGGGCGATCGTTGCCTCAAAGACTCTGTTCTTTTGGGTCGAGGGTCAGGGGACTAGAAACGAAGCCTTGAGTTTAGTGCTGTTGAGGCTTTTTTTGGGTCCAATACTGTCTCTGGTGTATTTAAAGTAAAACAAATTTTATCATTTGTTCCAATCCTAGTTTCCTGAGTTTAATCTAAATCTGAATAAGCATTAATGGTTTCAGGTCTGCTTCTTTGGAACGAGACCAGGAAGCAATGGGCTGGAAATAAATTGTCCGAGAGCCAAAAGCAAGTTCGAGAACCGAAAATAAGGTGAATGAATAACTTTTTAGTGCAACACAACGCGAAGTGTTGGTATTTACACTTACTCATTTGATTCACCCGGTAATGCAAACAAACAATTCTCCTCAACCATATAAAAACTCTTGCTTCATTTGATGACTTGAAAATCAGACCGTTAGACTTAAAAACCCCATCATTGATCTACAAAGCCTTGAGCAAGGGACAAAAACAATGAAGATTTAGATATTTTTTCACTGATCTTGATGTCACGGTTGAATCGCAGATACATTACTAATTAGTGTGCCCCCAAATCTTAATCTTCTGCAGTTGGAATGCTACTTATGAGAGCTTGTTAGGGACGAACAAGCCGTTCCCCGAGGCCGTGCCTCTTGCTGTAAGTTGTCAGAAAGTTTCACTTGTTCTCTACTGCATTTTCTTGTCCACCCGAATGACGGATTGTTAATTTTGCTAACAAAAATGCCAGGAGATGATAGAGTTTCTTGTTGATGTCTGGGAGCAGGAGGGTCTGTATGAC

mRNA sequence

TGTAGTGGATGCTGCACTGCACCTGCACTAGGTAATGCAATGGATGGACCATCTAAAGGTCTGAGAGTTGAAGACCAAGAAGCGAAAAAACAATGCTTACCGGAAAATTTCCCAAGTTCTAGCACATATGAAATGGACAACAGTACAGTTTGGTCCCAGAGAAGCATTGCATCAGCCAAGTCTCATGATTCCCACAGCAATATTGGGAGCAGTAGAGACTTTGTAAATTCTGGTCTGCTTCTTTGGAACGAGACCAGGAAGCAATGGGCTGGAAATAAATTGTCCGAGAGCCAAAAGCAAGTTCGAGAACCGAAAATAAGTTGGAATGCTACTTATGAGAGCTTGTTAGGGACGAACAAGCCGTTCCCCGAGGCCGTGCCTCTTGCTGAGATGATAGAGTTTCTTGTTGATGTCTGGGAGCAGGAGGGTCTGTATGAC

Coding sequence (CDS)

TGTAGTGGATGCTGCACTGCACCTGCACTAGGTAATGCAATGGATGGACCATCTAAAGGTCTGAGAGTTGAAGACCAAGAAGCGAAAAAACAATGCTTACCGGAAAATTTCCCAAGTTCTAGCACATATGAAATGGACAACAGTACAGTTTGGTCCCAGAGAAGCATTGCATCAGCCAAGTCTCATGATTCCCACAGCAATATTGGGAGCAGTAGAGACTTTGTAAATTCTGGTCTGCTTCTTTGGAACGAGACCAGGAAGCAATGGGCTGGAAATAAATTGTCCGAGAGCCAAAAGCAAGTTCGAGAACCGAAAATAAGTTGGAATGCTACTTATGAGAGCTTGTTAGGGACGAACAAGCCGTTCCCCGAGGCCGTGCCTCTTGCTGAGATGATAGAGTTTCTTGTTGATGTCTGGGAGCAGGAGGGTCTGTATGAC

Protein sequence

CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIEFLVDVWEQEGLYD

Homology

[Close]

BLAST of MS001317 vs. NCBI nr
Match: XP_022131290.1 (uncharacterized protein LOC111004556 [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 14  MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD 73
           MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD
Sbjct: 1   MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD 60

Query: 74  FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE 133
           FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE
Sbjct: 61  FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE 120

Query: 134 FLVDVWEQEGLYD 147
           FLVDVWEQEGLYD
Sbjct: 121 FLVDVWEQEGLYD 133

[Close]

BLAST of MS001317 vs. NCBI nr
Match: XP_008445211.1 (PREDICTED: uncharacterized protein LOC103488310 isoform X1 [Cucumis melo] >XP_008445213.1 PREDICTED: uncharacterized protein LOC103488310 isoform X1 [Cucumis melo])

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 3   GCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSH 62
           GCC+A ALGNAMDGPSKGLRV+D+EAKKQCLPENFPSSST EMDNSTVWSQRS+ASA+SH
Sbjct: 53  GCCSASALGNAMDGPSKGLRVKDKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASAQSH 112

Query: 63  DSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPF 122
           DS SNIGSS DFVNSGLLLWNETRKQW GNK+S+SQKQV+EPKISWNATY+SLL TNKPF
Sbjct: 113 DSQSNIGSSTDFVNSGLLLWNETRKQWVGNKMSKSQKQVQEPKISWNATYDSLLTTNKPF 172

Query: 123 PEAVPLAEMIEFLVDVWEQEGLYD 147
           PEA+PL EMIEFLVDVWEQEGLYD
Sbjct: 173 PEAIPLTEMIEFLVDVWEQEGLYD 196

[Close]

BLAST of MS001317 vs. NCBI nr
Match: KAA0064925.1 (uncharacterized protein E6C27_scaffold82G002430 [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 3   GCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSH 62
           GCC+A ALGNAMDGPSKGLRV+D+EAKKQCLPENFPSSST EMDNSTVWSQRS+ASA+SH
Sbjct: 85  GCCSASALGNAMDGPSKGLRVKDKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASAQSH 144

Query: 63  DSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPF 122
           DS SNIGSS DFVNSGLLLWNETRKQW GNK+S+SQKQV+EPKISWNATY+SLL TNKPF
Sbjct: 145 DSQSNIGSSTDFVNSGLLLWNETRKQWVGNKMSKSQKQVQEPKISWNATYDSLLTTNKPF 204

Query: 123 PEAVPLAEMIEFLVDVWEQEGLYD 147
           PEA+PL EMIEFLVDVWEQEGLYD
Sbjct: 205 PEAIPLTEMIEFLVDVWEQEGLYD 228

[Close]

BLAST of MS001317 vs. NCBI nr
Match: XP_022951409.1 (uncharacterized protein LOC111454240 isoform X1 [Cucurbita moschata] >XP_022951410.1 uncharacterized protein LOC111454240 isoform X1 [Cucurbita moschata])

HSP 1 Score: 264.2 bits (674), Expect = 6.5e-67
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAK 60
           C G CT PALG+AMDGPS GLRVEDQEAKKQCLPENF SSST EMDNSTVWSQRS+ASA+
Sbjct: 59  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQ 118

Query: 61  SHDSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNK 120
           SHDSH+N+GSS +FVNSGLLLWNETRKQW GNK SESQK+VREPKISWNATY+SLL TNK
Sbjct: 119 SHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNK 178

Query: 121 PFPEAVPLAEMIEFLVDVWEQEGLYD 147
           PFPEA+PLAEMIEFLVDVWEQEGLYD
Sbjct: 179 PFPEAIPLAEMIEFLVDVWEQEGLYD 204

[Close]

BLAST of MS001317 vs. NCBI nr
Match: KAG6585468.1 (hypothetical protein SDJN03_18201, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264.2 bits (674), Expect = 6.5e-67
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAK 60
           C G CT PALG+AMDGPS GLRVEDQEAKKQCLPENF SSST EMDNSTVWSQRS+ASA+
Sbjct: 80  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQ 139

Query: 61  SHDSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNK 120
           SHDSH+N+GSS +FVNSGLLLWNETRKQW GNK SESQK+VREPKISWNATY+SLL TNK
Sbjct: 140 SHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNK 199

Query: 121 PFPEAVPLAEMIEFLVDVWEQEGLYD 147
           PFPEA+PLAEMIEFLVDVWEQEGLYD
Sbjct: 200 PFPEAIPLAEMIEFLVDVWEQEGLYD 225

[Close]

BLAST of MS001317 vs. ExPASy TrEMBL
Match: A0A6J1BP98 (uncharacterized protein LOC111004556 OS=Momordica charantia OX=3673 GN=LOC111004556 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 14  MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD 73
           MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD
Sbjct: 1   MDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSHDSHSNIGSSRD 60

Query: 74  FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE 133
           FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE
Sbjct: 61  FVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPFPEAVPLAEMIE 120

Query: 134 FLVDVWEQEGLYD 147
           FLVDVWEQEGLYD
Sbjct: 121 FLVDVWEQEGLYD 133

[Close]

BLAST of MS001317 vs. ExPASy TrEMBL
Match: A0A1S3BC47 (uncharacterized protein LOC103488310 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488310 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 3   GCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSH 62
           GCC+A ALGNAMDGPSKGLRV+D+EAKKQCLPENFPSSST EMDNSTVWSQRS+ASA+SH
Sbjct: 53  GCCSASALGNAMDGPSKGLRVKDKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASAQSH 112

Query: 63  DSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPF 122
           DS SNIGSS DFVNSGLLLWNETRKQW GNK+S+SQKQV+EPKISWNATY+SLL TNKPF
Sbjct: 113 DSQSNIGSSTDFVNSGLLLWNETRKQWVGNKMSKSQKQVQEPKISWNATYDSLLTTNKPF 172

Query: 123 PEAVPLAEMIEFLVDVWEQEGLYD 147
           PEA+PL EMIEFLVDVWEQEGLYD
Sbjct: 173 PEAIPLTEMIEFLVDVWEQEGLYD 196

[Close]

BLAST of MS001317 vs. ExPASy TrEMBL
Match: A0A5A7VGA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002430 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 3   GCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSH 62
           GCC+A ALGNAMDGPSKGLRV+D+EAKKQCLPENFPSSST EMDNSTVWSQRS+ASA+SH
Sbjct: 85  GCCSASALGNAMDGPSKGLRVKDKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASAQSH 144

Query: 63  DSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPF 122
           DS SNIGSS DFVNSGLLLWNETRKQW GNK+S+SQKQV+EPKISWNATY+SLL TNKPF
Sbjct: 145 DSQSNIGSSTDFVNSGLLLWNETRKQWVGNKMSKSQKQVQEPKISWNATYDSLLTTNKPF 204

Query: 123 PEAVPLAEMIEFLVDVWEQEGLYD 147
           PEA+PL EMIEFLVDVWEQEGLYD
Sbjct: 205 PEAIPLTEMIEFLVDVWEQEGLYD 228

[Close]

BLAST of MS001317 vs. ExPASy TrEMBL
Match: A0A6J1GIP5 (uncharacterized protein LOC111454240 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454240 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-67
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAK 60
           C G CT PALG+AMDGPS GLRVEDQEAKKQCLPENF SSST EMDNSTVWSQRS+ASA+
Sbjct: 59  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQ 118

Query: 61  SHDSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNK 120
           SHDSH+N+GSS +FVNSGLLLWNETRKQW GNK SESQK+VREPKISWNATY+SLL TNK
Sbjct: 119 SHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNK 178

Query: 121 PFPEAVPLAEMIEFLVDVWEQEGLYD 147
           PFPEA+PLAEMIEFLVDVWEQEGLYD
Sbjct: 179 PFPEAIPLAEMIEFLVDVWEQEGLYD 204

[Close]

BLAST of MS001317 vs. ExPASy TrEMBL
Match: A0A0A0LPL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381750 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.0e-67
Identity = 125/144 (86.81%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 3   GCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAKSH 62
           GCCTA ALGNAMDGPSKGLRV+++EAKKQCLPENFPSSST EMDNSTVWSQRS+AS ++H
Sbjct: 53  GCCTASALGNAMDGPSKGLRVKNKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASGQAH 112

Query: 63  DSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLGTNKPF 122
           DSHSNIGSS DFVNSGLLLWNETRKQW GNK+S SQKQV+EPKISWNATY++LL TNKPF
Sbjct: 113 DSHSNIGSSTDFVNSGLLLWNETRKQWVGNKMSGSQKQVQEPKISWNATYDNLLTTNKPF 172

Query: 123 PEAVPLAEMIEFLVDVWEQEGLYD 147
           PEA+PL EMIEFLVDVWEQEGLYD
Sbjct: 173 PEAIPLTEMIEFLVDVWEQEGLYD 196

[Close]

BLAST of MS001317 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-40
Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 1   CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAK 60
           C GCC  P L  A+D PSKGLR++ +  KK  + E+F S+ST EMDNST+ SQRS++S  
Sbjct: 21  CFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSIS 80

Query: 61  SHDSHSNIGSS---RDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLG 120
             ++ S   S+    +FVN GL LWN+TR+QW  N  S+ + +VREP ISWNATYESLLG
Sbjct: 81  FTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVREPTISWNATYESLLG 140

Query: 121 TNKPFPEAVPLAEMIEFLVDVWEQEGLYD 147
            NK F   +PL EM++FLVDVWEQEGLYD
Sbjct: 141 MNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of MS001317 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-40
Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 1   CSGCCTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRSIASAK 60
           C GCC  P L  A+D PSKGLR++ +  KK  + E+F S+ST EMDNST+ SQRS++S  
Sbjct: 21  CFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSIS 80

Query: 61  SHDSHSNIGSS---RDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLG 120
             ++ S   S+    +FVN GL LWN+TR+QW  N  S+ + +VREP ISWNATYESLLG
Sbjct: 81  FTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWLANGTSQKKAKVREPTISWNATYESLLG 140

Query: 121 TNKPFPEAVPLAEMIEFLVDVWEQEGLYD 147
            NK F   +PL EM++FLVDVWEQEGLYD
Sbjct: 141 MNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of MS001317 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 9.8e-29
Identity = 72/148 (48.65%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 1   CSGCCTAP-ALGNAMDGPSKGLRVEDQEAKK-QCLPENFPSSSTYEMD-NSTVWSQRSIA 60
           C GCC     L   +D PSKGL+++ +  KK     ++F S+ST +MD N T+ SQ   +
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQ---S 76

Query: 61  SAKSHDSHSNIGSSRDFVNSGLLLWNETRKQWAGNKLSESQKQVREPKISWNATYESLLG 120
           S    D   +  +S +FVN GL+LWN TR+QW    L+  Q  V EP ISWN+TY+SLL 
Sbjct: 77  SNPPFDPQCSTSNSTEFVNHGLILWNHTRQQWR-ECLTRQQCLVPEPAISWNSTYDSLLS 136

Query: 121 TNKPFPEAVPLAEMIEFLVDVWEQEGLY 146
           TNK FP+ +PL EM+ FLVDVWE+EGLY
Sbjct: 137 TNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

[Close]

BLAST of MS001317 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-26
Identity = 71/157 (45.22%), Postives = 101/157 (64.33%), Query Frame = 0


Query: 1   CSGC-----CTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRS 60
           C GC      TA +L    D PS  +    +  KK  + E+F S+ST +MDN T  SQ S
Sbjct: 4   CVGCYREHRSTAASL---KDPPSNSIA---RPCKKPSVSEDFWSTSTVDMDNITFPSQGS 63

Query: 61  IASA-KSHDSHS---NIGSSRDFVNSGLLLWNETRKQWAG-NKLSESQKQVREPKISWN- 120
           ++S+ ++ DS S   N  +  ++VN GLLLWN+TR++W G +K +      +  K++WN 
Sbjct: 64  LSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNT 123

Query: 121 ATYESLLGTNKPFPEAVPLAEMIEFLVDVWEQEGLYD 147
           ATY+SLLG+NK FP+ +PL EM++FLVD+WEQEGLYD
Sbjct: 124 ATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

[Close]

BLAST of MS001317 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-26
Identity = 71/157 (45.22%), Postives = 101/157 (64.33%), Query Frame = 0


Query: 1   CSGC-----CTAPALGNAMDGPSKGLRVEDQEAKKQCLPENFPSSSTYEMDNSTVWSQRS 60
           C GC      TA +L    D PS  +    +  KK  + E+F S+ST +MDN T  SQ S
Sbjct: 4   CVGCYREHRSTAASL---KDPPSNSIA---RPCKKPSVSEDFWSTSTVDMDNITFPSQGS 63

Query: 61  IASA-KSHDSHS---NIGSSRDFVNSGLLLWNETRKQWAG-NKLSESQKQVREPKISWN- 120
           ++S+ ++ DS S   N  +  ++VN GLLLWN+TR++W G +K +      +  K++WN 
Sbjct: 64  LSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNT 123

Query: 121 ATYESLLGTNKPFPEAVPLAEMIEFLVDVWEQEGLYD 147
           ATY+SLLG+NK FP+ +PL EM++FLVD+WEQEGLYD
Sbjct: 124 ATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

The following BLAST results are available for this feature:

BLAST of MS001317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131290.1	2.4e-69	100.00	uncharacterized protein LOC111004556 [Momordica charantia]	[more]
XP_008445211.1	2.9e-67	88.19	PREDICTED: uncharacterized protein LOC103488310 isoform X1 [Cucumis melo] >XP_00...	[more]
KAA0064925.1	2.9e-67	88.19	uncharacterized protein E6C27_scaffold82G002430 [Cucumis melo var. makuwa]	[more]
XP_022951409.1	6.5e-67	86.99	uncharacterized protein LOC111454240 isoform X1 [Cucurbita moschata] >XP_0229514...	[more]
KAG6585468.1	6.5e-67	86.99	hypothetical protein SDJN03_18201, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS001317 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BP98	1.2e-69	100.00	uncharacterized protein LOC111004556 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A1S3BC47	1.4e-67	88.19	uncharacterized protein LOC103488310 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7VGA9	1.4e-67	88.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GIP5	3.2e-67	86.99	uncharacterized protein LOC111454240 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LPL3	7.0e-67	86.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381750 PE=4 SV=1	[more]

BLAST of MS001317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	1.5e-40	56.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	1.5e-40	56.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32342.1	9.8e-29	48.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	5.9e-26	45.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	5.9e-26	45.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 105..146 e-value: 1.8E-12 score: 48.0 coord: 41..104 e-value: 2.2E-7 score: 31.4
None	No IPR available	PANTHER	PTHR33373:SF15	DUF4050 FAMILY PROTEIN	coord: 1..146
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001317.1	MS001317.1	mRNA