MS001137 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGTTCTGCTCCTCCACCAGCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTCGGAGGACTCGGCGCCACTATTGCTCAAGGTGAGTTTAGAAGCACTTGCATCTTCTTTAACAACCGTAAATGATTTTAGTTTTATCATAACCATTGTATTTTTAATTTTTTTTATTTCTTTGCTGATGTGCAGGTATGGCCTTTGGTACTGGAAGTGCGGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGGGTCATTCAGCATGAGTCTGTTGATTCATCAGCTGCCCCTTCTTCAGTGCCTACTGCAGCAAGCAATGTTGGAGGTTCTGAAGTTTGTAATGGTCAATCAAAGGCCTTGCAAGATGTAGGTTTCGTGTTCTCTATGTTATTAATAACACAACTATGTCTAGTATGCATTCCCTTTTATTTTCTTGGATAGATTGTCAGTTGATCATGGTCAAGCCATTTTTTAGGCGTTATTTTCATACTAAAGCGGTACTTTTTTCCCCTTCTGCAGTGCCTGAATCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACATGGATATGTTGCAGGAATGTCGCAGAAGCTCGGGTCCTGGTTTGGGTGCT GTTAGTTCTGCTCCTCCACCAGCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTCGGAGGACTCGGCGCCACTATTGCTCAAGGTATGGCCTTTGGTACTGGAAGTGCGGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGGGTCATTCAGCATGAGTCTGTTGATTCATCAGCTGCCCCTTCTTCAGTGCCTACTGCAGCAAGCAATGTTGGAGGTTCTGAAGTTTGTAATGGTCAATCAAAGGCCTTGCAAGATTGCCTGAATCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACATGGATATGTTGCAGGAATGTCGCAGAAGCTCGGGTCCTGGTTTGGGTGCT GTTAGTTCTGCTCCTCCACCAGCACCTGTACAAGGTGGTGGAGGTGGGTCTATGCTCGGAGGACTCGGCGCCACTATTGCTCAAGGTATGGCCTTTGGTACTGGAAGTGCGGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGGGTCATTCAGCATGAGTCTGTTGATTCATCAGCTGCCCCTTCTTCAGTGCCTACTGCAGCAAGCAATGTTGGAGGTTCTGAAGTTTGTAATGGTCAATCAAAGGCCTTGCAAGATTGCCTGAATCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACATGGATATGTTGCAGGAATGTCGCAGAAGCTCGGGTCCTGGTTTGGGTGCT VSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHESVDSSAAPSSVPTAASNVGGSEVCNGQSKALQDCLNHYGSDIGKCQFYMDMLQECRRSSGPGLGA Homology
BLAST of MS001137 vs. NCBI nr
Match: XP_022132139.1 (uncharacterized protein C6C3.02c-like [Momordica charantia]) HSP 1 Score: 235.3 bits (599), Expect = 2.7e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of MS001137 vs. NCBI nr
Match: XP_022962551.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata] >XP_023545354.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita pepo subsp. pepo] >KAG7029663.1 SPAC6C3.02c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46 Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of MS001137 vs. NCBI nr
Match: KAA0065106.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]) HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46 Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS001137 vs. NCBI nr
Match: XP_008444901.1 (PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]) HSP 1 Score: 194.9 bits (494), Expect = 4.0e-46 Identity = 100/120 (83.33%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS001137 vs. NCBI nr
Match: XP_022997290.1 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 6.8e-46 Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of MS001137 vs. ExPASy TrEMBL
Match: A0A6J1BS82 (uncharacterized protein C6C3.02c-like OS=Momordica charantia OX=3673 GN=LOC111005079 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of MS001137 vs. ExPASy TrEMBL
Match: A0A6J1HDK4 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462950 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.6e-47 Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of MS001137 vs. ExPASy TrEMBL
Match: A0A5A7VFK2 (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004400 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47 Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS001137 vs. ExPASy TrEMBL
Match: A0A1S3BAZ1 (uncharacterized protein C6C3.02c-like OS=Cucumis melo OX=3656 GN=LOC103488112 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46 Identity = 100/120 (83.33%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of MS001137 vs. ExPASy TrEMBL
Match: A0A6J1K966 (coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492237 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.3e-46 Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of MS001137 vs. TAIR 10
Match: AT5G64400.1 (CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 141.7 bits (356), Expect = 3.7e-34 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of MS001137 vs. TAIR 10
Match: AT5G09570.1 (Cox19-like CHCH family protein ) HSP 1 Score: 125.2 bits (313), Expect = 3.6e-29 Identity = 65/120 (54.17%), Postives = 85/120 (70.83%), Query Frame = 0
BLAST of MS001137 vs. TAIR 10
Match: AT5G64400.2 (BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 127 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 9; Metazoa - 16; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19 Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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