MS001049 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTACATTCCCACCAATATATATATATTTTTCTTTATCATTTCTACACTCTACCCATTATATTACTTTATATTGGATTGCATGTTTCTATTCTGTGTCTCTCTTCTTGCTTCTTAGTCGTTTTCGTGGACCATTCCTTGTCGATGTTTGGTGAAAATGAGGTTGTCGGCGTTGTCATTTACGTTTTTTTCTTCTTTTTTTGACTGCCTGATGGAAATTGCAGGAAATTGAAATTGACTGCGTTGATTTTAACCGTTGTTCTTGTTTGGGTCTTGGTGTTTTGTGATTTTGGTGTGTTCTTTTATCATTTGATTAGGGGCTTGGGCATGGATCGGAGAATTGGTTAGTTTGTTGATTCCTTTCTGTTGCCACACAATCAATTTCGAGATTGACAAAATTCTATTTTTTCTAATTAAATTTAAGTGAGATAATTGTTTCAGATTTAAAATACGTTCCTACAGGTTTCCTAGATTATAGATTGTGGGTAACTCATGCATGATTCTTAGGGCGTATCATCATTCTAAGTGGTACTAATTTATTTGTTTTATTTGAAGTTTATTTCAATTTTGAGCAATTTCCCTTCTACATTTATTGTGAGATGGACTGCAAGAGTTTAGGAATGCCCTGCATTATCGTAATGTTCACTTTGCTATTTTTTGCAGGTGTATTCCTTTTAGGTATAGAAGTTCTGATGATGAAAGTTCAGATAAAGTAGTGGAGGTGCTTATGATTGACACACCAAGTGGACCGGGTCTTTTGTTCCCAAAGGTATGAAGTTGTTTTCCCACCACTTCTCCATTTCAAGCTAATTATTAGTTATTCTTGAAGAGCTTTATACATAGTTTGTTACATTATTATTTTTTACCCACTATATTAAACAATTCTAATGAAATAATAAGAATGTAAAATTAAATTCAAAATGATAAACAATATCAAAAGTGTAGGAAGACAAATACTTTACAAGAATATGACATGAGCTTCATCTATGTGGTAAAAACATGCCATTTATTATCTCCAATTAAATTATTGAGAAATTTTCTTATATTATCTATAATAAAAAGTGAAAGAAAAAGAAAAAGATTTCATATCATTCTCAATGTAGAATATGTATTAAAATCATTTTGCTCCTCTACGCCACCCAAAATCACAATTTGTCGTGCATTCTTGCCCTATGATGACCATGGCTGCGGCTGGCCTAAGGTAATTCAGGGCCTTAGCAAAAATTTATATTTAGTCTTTTAATTTTTAAAATAAAATTTATATTTACTACATTAATTTTAAATTTCTCAATTATGTCATTTTTAAATTTATTTATATTAAATGTTCAATTTTATTATGTATTGGGTTGGCCTTAGGCAATTTGGAGTCAAGGCTCAAGGCTGCCTTAAGCCAATAATGTGATTGAACTTTGTTGTTATGTTGTCCAGTGTCACGTCTTTGTTCTCATCAGCTTGATCTGTGAATATCTGGAGAGTAGATTACATAAATTTCATTTGATTTTAACCATATAATATGAATATGCCATAGTTCAGAATATTTTCTATGTTGATAACTTGAGGTTAAATGACAACTCTTTTATTCTCTCGTGTAAAGTAAAGTATACAAGCTTATTTAGTCTTTAACATCAACATTTTCTTTAATAGGGAGGCTGGGAGAATGACGAGACGGTGGAAGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAATATTACTTTAATACTTTGAAATGTTTTTTTCTTGAGCTTTGAAATTTTTATAATACTCTATGATAGTGATAGCTTTGTTCTTATTGCTATTTGCTAAAATTGCAAGAATTTTTTTTTTTGCTAATGTATTTAAAGAATATAGGACTGAAATAGGAGTGCTTTTGAGAGTGTTGAGGGGTGTCGCATGTTTTATTCCTTTAGGTAGGAGTTAGGACTTGGACTAGGATTGGATGACCCTTTTTTGGTTGTTGTTGTGAAAAATTAATAATTGTTGTTAACTTATCATTAATGGAAGTGATAGAGTTAAGAATGTTAGTGGCTTTTGAAAAAGAAAAATGTTGGAGGAAAATGTCGCCTGAAATTGGGAGATTTAGTTGACCAACAGATTGTAATTATTTGTTCCCTCAATACATTTGAGAAAATATTACAAGATAGAACATTTCTTATGCACTTGGTATATCTTTTTCTCTATCACAATAACTTCTATTGATGCTTCTATTGGAGTTAATTCATGGACTTCACTTGACTAATCATTTGATATACTGACCATAGTTCCATAAGTCATATAAAACTTGTAATTTGATTTAATGTAATGAAACAGTAGTGATATTTAGATGGCCTATGACATCAACAAGCATAGTTAGGTTAGTTTTTCCCAAAATTGTGGGTTTGGCCCACTGTATTGGTAAGGGATCGAGACTTTTTATGGAAGCTTGAAGGTGATACTAGAATGACTCTCCTCCCCTCTCTCGTATCCTTCGTTTTATTGTCACTTGGGTCTTAATCTTCTCATTTTTTATCCTTTAGTCATGTTTGTTTTTTAGTTCGTTAGAATTGGATGACTGCTTGGAATTGTTTGGCGGTGTTAGGACTCAGCAAAGAGTTTTTATTTAGTTTGAATGATAATTCTAGAGGAAGCCAGGATCATTTTAAAGAAGTTGGTAGCTGGAGTTATTTCACTCAAGATTTAGGTTTTGCTGCGTTGTTGGTGATTGAAGGTGTTGGTGCTTACATCTAGCCAAAGGTTTCTTTTAGCAAAAACGCAAAACTCAGGATAGTATTTTTTGGTGTTGATAAAATTTAGATAAGAAGGGACCAGGGGTACTTATGCACAAAATTTTGAGGGTTATGATCATTAATCAATGTGTATCTTTTATCTATCCCAACATGCTTGCATAACTCAAGTTGGTGCAATTTCTTAAAGAATGAGAAGATGGGAAAACTAGAGTTAGTGAAAGAGTTTCTGTTGACTGTTAAGGCCTCCAAGTTGAGTGGTATAGAACTATTGGTGTTTTTTTGAGTCCATTCCATTTGAAAATGGAGACTTTTATCTGTTCAGTTTAAAATAGAAGAAAAAGAGAAGAGGTAGGATGACTTGAAAGGAAAAAAGAACTCCTACCTACATTACTAACAATAGTAACTTGTCATCCTTTTCTACTAGTTATTTTTCTTCCCCAAAAGAAGTATTTATTTGAAAGGTATCTTAAGAAACAGCATTAATTGTAATATTTTGCTATGTCATTGTCAATTTTGATTTGGATTAAGTAATGACTGCATTTGTTTCCTTAGAATGTCAAAAATGAATCAGATATTAGTATTTTGTTTCCATAGGACAATACCATTGGGTAGTTATGACTAGAAAGGAATGCAAAATTTTTTAAAGGTACAAAAGAAACAAATTTGATCTTTAGAAGATAATAAGATTTAAATAAACATGAATTGTAATTGTTTATGTTGATAACTAAATCATGCAATAGTCTCAACTCTCAATTAATTAGACTATTTACATTATTTGAAAAACGTTATGCTATCTCAGGTATAATAAAGGTCATGTTCCACCTCCCCTCTATTTGGTATCTTGCTCTTTTTGTTCAATGAAATGATTTCTTATCATAAAAGAAAATTGGTATATTGAAACTAATGTGAGTACTTGACATACATACATAACTTTGGGTAAATCATGCTTTTGAGACTGACAAAGTCCAACCACAAGGAGTGGTGGAAGGTTGATAGATTTAAAGGTGGCTCCAACCTCTTGGGGTCAAAATAGAACTTGTTATTTTGTTCAAGAAATACCTACCAACGTTCTTTACTCGGTTGCACTGTTCTGTTATTTAATGTTAATTTAATCTTGCACTGTTTTGTTGTTTTATGTTCATTAAACATCCAAGTGGAGAACTATAAGAAGAAATAATCTTAGCCATGTATTTTTTTGTTATTTCTACATTACTTTATGATTGGATGACATTTAACTAAATGCTCCATTTATTTGGGATTGCTGCATTATTTTTGTAATTATTTGTTAGGTATTTCTTTTTTGGGATTGAAGCCATTTCTTGTTTTTGGTGATTAATATCTATTTGGCTCCTTCTGGGTTACCATTTTTTAGGCCAGGCCGGTATTTTTTGGCCTATGCTGGATTCTCTCATCTTTTCTCAATGAAAATTTAGTTATCTAGTTAAAAAAAACTAAATGCTGCATTTGTAATTGGACTGTGTGGAATCTATTATCAACGTTAAAAGTTTGCTTCCCTTTATTTTGTCTCTTCGAATAGCCCATCAATTCTTTTATCTATAAGATTTGACATCTATTAAGACGAGTTATTTAGTACACATGAAGTTGAAAAATATCTAAAAATATCTTTTTATTCCTAAGGAAATCAATGTAAATAAAGCAAAAGGATCCATTATTAGAAGTTTATAAATATTGATGAGAGAAAACAAAGTTATAAAAAGAAAGCTCACTGCTGCTGAGATACATGATGTTCTCTCACACAACTTTTCTTGTAAAATCTTGGTTTTCAGGGTTTTCTTGGAGACTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTTAGTCCAGATGGGTTGTGTAGAGCAGCAATGTATGCTTTATTTGTCAACGAGGAGCTTGAGTCATGGCCAGAGCAAAACACCAGAAACAGAAGTTGGGTGACCATACCCGAGGCAGTTGAAAAATGCAGGCACGCGTGGATGACGGATGCCCTTGTCCTTGGTTTCAACAAATGGCATGCAGAAAATATGAGTGATGAA ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTGTATTCCTTTTAGGTATAGAAGTTCTGATGATGAAAGTTCAGATAAAGTAGTGGAGGTGCTTATGATTGACACACCAAGTGGACCGGGTCTTTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACGGTGGAAGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGGTTTTCTTGGAGACTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTTAGTCCAGATGGGTTGTGTAGAGCAGCAATGTATGCTTTATTTGTCAACGAGGAGCTTGAGTCATGGCCAGAGCAAAACACCAGAAACAGAAGTTGGGTGACCATACCCGAGGCAGTTGAAAAATGCAGGCACGCGTGGATGACGGATGCCCTTGTCCTTGGTTTCAACAAATGGCATGCAGAAAATATGAGTGATGAA ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTGTATTCCTTTTAGGTATAGAAGTTCTGATGATGAAAGTTCAGATAAAGTAGTGGAGGTGCTTATGATTGACACACCAAGTGGACCGGGTCTTTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACGGTGGAAGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGGTTTTCTTGGAGACTATCACTTCAAGAGTAAAACACAGCAAGATGAGTTTAGTCCAGATGGGTTGTGTAGAGCAGCAATGTATGCTTTATTTGTCAACGAGGAGCTTGAGTCATGGCCAGAGCAAAACACCAGAAACAGAAGTTGGGTGACCATACCCGAGGCAGTTGAAAAATGCAGGCACGCGTGGATGACGGATGCCCTTGTCCTTGGTTTCAACAAATGGCATGCAGAAAATATGAGTGATGAA MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDDESSDKVVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGELMGFLGDYHFKSKTQQDEFSPDGLCRAAMYALFVNEELESWPEQNTRNRSWVTIPEAVEKCRHAWMTDALVLGFNKWHAENMSDE Homology
BLAST of MS001049 vs. NCBI nr
Match: XP_022132288.1 (nudix hydrolase 16, mitochondrial isoform X1 [Momordica charantia] >XP_022132289.1 nudix hydrolase 16, mitochondrial isoform X1 [Momordica charantia]) HSP 1 Score: 364.4 bits (934), Expect = 5.4e-97 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MS001049 vs. NCBI nr
Match: XP_038886652.1 (nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92 Identity = 164/173 (94.80%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of MS001049 vs. NCBI nr
Match: XP_023545558.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347.1 bits (889), Expect = 8.9e-92 Identity = 163/173 (94.22%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of MS001049 vs. NCBI nr
Match: XP_022961746.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 347.1 bits (889), Expect = 8.9e-92 Identity = 163/173 (94.22%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of MS001049 vs. NCBI nr
Match: XP_011657455.1 (nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91 Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of MS001049 vs. ExPASy Swiss-Prot
Match: Q9LHK1 (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 8.4e-69 Identity = 122/170 (71.76%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of MS001049 vs. ExPASy Swiss-Prot
Match: Q93ZY7 (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39 Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = 0
BLAST of MS001049 vs. ExPASy Swiss-Prot
Match: Q52K88 (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.7e-38 Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of MS001049 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.2e-36 Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = 0
BLAST of MS001049 vs. ExPASy Swiss-Prot
Match: Q9ZU95 (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 8.0e-35 Identity = 73/152 (48.03%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of MS001049 vs. ExPASy TrEMBL
Match: A0A6J1BSN1 (nudix hydrolase 16, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005181 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
BLAST of MS001049 vs. ExPASy TrEMBL
Match: A0A6J1HB74 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462424 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 4.3e-92 Identity = 163/173 (94.22%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of MS001049 vs. ExPASy TrEMBL
Match: A0A6J1K726 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492230 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.1e-91 Identity = 161/173 (93.06%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of MS001049 vs. ExPASy TrEMBL
Match: A0A5A7VFY1 (Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001020 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 4.8e-91 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of MS001049 vs. ExPASy TrEMBL
Match: A0A1S3BDF1 (nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 4.8e-91 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of MS001049 vs. TAIR 10
Match: AT3G12600.1 (nudix hydrolase homolog 16 ) HSP 1 Score: 261.2 bits (666), Expect = 6.0e-70 Identity = 122/170 (71.76%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of MS001049 vs. TAIR 10
Match: AT3G12600.2 (nudix hydrolase homolog 16 ) HSP 1 Score: 243.8 bits (621), Expect = 9.9e-65 Identity = 112/159 (70.44%), Postives = 128/159 (80.50%), Query Frame = 0
BLAST of MS001049 vs. TAIR 10
Match: AT1G12880.1 (nudix hydrolase homolog 12 ) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-41 Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = 0
BLAST of MS001049 vs. TAIR 10
Match: AT3G26690.1 (nudix hydrolase homolog 13 ) HSP 1 Score: 158.3 bits (399), Expect = 5.5e-39 Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of MS001049 vs. TAIR 10
Match: AT3G26690.2 (nudix hydrolase homolog 13 ) HSP 1 Score: 158.3 bits (399), Expect = 5.5e-39 Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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