MS000897 (gene) Bitter gourd (TR) v1

Overview
NameMS000897
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold36: 142210 .. 144030 (-)
RNA-Seq ExpressionMS000897
SyntenyMS000897
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGGGCAACCTTAACTCTGCCATTAAATTGTTCGCTGAAATGCCTCGTCACGACGTTGTTACCTACAATTTGCTAATAACTGGGTGTCTTCGCAATGGACTTCCAGAGCGCGCATTTGGGTTATACAGCGAAATGGTTTCTCGAGGGATTAGAGAAAGTGCGTCAACATTTACTTCAGTCTTGGGCACTTGTAGCAACATGGATTTTTACAAAGAAGGAAGTCAAATTCACTGCAGAGTGGTTTTTCTTGGATTTAGCTTGAATTTGTTTATTTGTAGCTCTCTAATTGATTACTATATGCGGGTGGGCCTTGATATCGTAGCTTTGAAGGTGTTTGATGAATTGCCACAACGAAATATAGCTGTTTGGAACTTGTTGCTACGTCGGTTTTGTGAACTGGGTCAATTCGAAAAGCTTCTGGAATTTTTCTCGAAAATGCAATTGGAAGGCCCGGATCCAAATGGACTTACTTTTTGCTATTTGCTTCGAGGATTTGGTAACGAAAGGCTCTTAGACGAAGGGAAGCAATTACACTGCCGCGCTGTAAAAATTGGATTGGTCGAACCAAATATCTTTGTTCCAAATGCTTTGGTGGATTTCTACTCTTATTGCAGAAGTTTAACAGAAGCAAAAAAGGCATTTGAATATATTCCAGTAGAGGATGTTATTTCCTGGAATTCGATTGTTGCAGTTTATGCGGACATTGGTTTCTTATCAGAAGCACTTGATTTGTTTTCTCGGATGCAGTTTTGGGGGAAAAGGCCCTCAATTCGGTCGTTAATGGCTCTTCTGAATTTATCCAGTCGGACAGGGAATATCCAGTTGGGGAAACAGATTCAATCTTGTGCTCTGAAAATGGGTTTTGGTCACGAGAGTAGCCACCTTCAATCCGCATTGATAAATATGTATGGAAAATGCCTTGATATTGAGAGTTCAGTGGCCGTGTATAGAAGTATTTCTGTGAGAACTTTGGAGTGTTGTAACTCTTTAATGACATCTTTATTACACTGTGGTGTCATTGAAGATGTGGTCGAGATGTTTGGATTGATGATTGACGAGGGAATTGAACTTGATGAGGTTACTTTGTCCACAACATTAAAAGCATTATCAATGGCTTCTCCATCAGACTTGACCAGCTGCAGATTGCTCCACTGTTGTGCCATAAAATCAGGCTTTGAATTTAATTCTGTAGTTTCTTGTTCTTTAATGGATGCTTACTCAAGATGTGGTCATGTTGAGCTTTCTTGCAAAGTTTTTGAGGAACTCCCTTCCCCAGGTGTCATTTGTTTCACCTCAATCATTAATGGATATGCCCGAAATGGAATGGGGAGGGAGGGTATTGAAATTCTCAAGGCGATGATCCAGAAAGGCATGGAACCTGACAAAGTGACGTTCTTGTGCGCATTGATAGGGTGCAACCATTCAGGACTGGTTGAAGAAGGAAGATTTGTGTTTGAGTCAATGAAAACCCTTTACGGAATTGAACCAGACTGGAAACATTATTCATGTATGGTTGATCTTCTAGGTCGTGCAGGCCTGTTGGATGAGGCTGAGAAGTTGCTGCAAAAGGTGCCAGAAAAGGTCAACAGTGTGATCTGGAGCTCCATGTTAAGAAGTTGTAGAATCCATAGAAATGAAACAATCGGAAGGAAAATTGCAAAGTCTTTGGTGGATCTCGAAGCTGAGGATCCTGCCATTCTTTTGCAGGCTTCAAACTTCTATTCTGATATTGGAGAGTTTGGAACCTCAAAGCAACTTAGAGAAGTTGCATTGACAAAAAAATTGGTAAGAGAAATTGGTCACAGTTTAATAGAGGTA

mRNA sequence

AAATTGGGCAACCTTAACTCTGCCATTAAATTGTTCGCTGAAATGCCTCGTCACGACGTTGTTACCTACAATTTGCTAATAACTGGGTGTCTTCGCAATGGACTTCCAGAGCGCGCATTTGGGTTATACAGCGAAATGGTTTCTCGAGGGATTAGAGAAAGTGCGTCAACATTTACTTCAGTCTTGGGCACTTGTAGCAACATGGATTTTTACAAAGAAGGAAGTCAAATTCACTGCAGAGTGGTTTTTCTTGGATTTAGCTTGAATTTGTTTATTTGTAGCTCTCTAATTGATTACTATATGCGGGTGGGCCTTGATATCGTAGCTTTGAAGGTGTTTGATGAATTGCCACAACGAAATATAGCTGTTTGGAACTTGTTGCTACGTCGGTTTTGTGAACTGGGTCAATTCGAAAAGCTTCTGGAATTTTTCTCGAAAATGCAATTGGAAGGCCCGGATCCAAATGGACTTACTTTTTGCTATTTGCTTCGAGGATTTGGTAACGAAAGGCTCTTAGACGAAGGGAAGCAATTACACTGCCGCGCTGTAAAAATTGGATTGGTCGAACCAAATATCTTTGTTCCAAATGCTTTGGTGGATTTCTACTCTTATTGCAGAAGTTTAACAGAAGCAAAAAAGGCATTTGAATATATTCCAGTAGAGGATGTTATTTCCTGGAATTCGATTGTTGCAGTTTATGCGGACATTGGTTTCTTATCAGAAGCACTTGATTTGTTTTCTCGGATGCATATTTCTGTGAGAACTTTGGAGTGTTGTAACTCTTTAATGACATCTTTATTACACTGTGGTGTCATTGAAGATGTGGTCGAGATGTTTGGATTGATGATTGACGAGGGAATTGAACTTGATGAGGTTACTTTGTCCACAACATTAAAAGCATTATCAATGGCTTCTCCATCAGACTTGACCAGCTGCAGATTGCTCCACTGTTGTGCCATAAAATCAGGCTTTGAATTTAATTCTGTAGTTTCTTGTTCTTTAATGGATGCTTACTCAAGATGTGGTCATGTTGAGCTTTCTTGCAAAGTTTTTGAGGAACTCCCTTCCCCAGGTGTCATTTGTTTCACCTCAATCATTAATGGATATGCCCGAAATGGAATGGGGAGGGAGGGTATTGAAATTCTCAAGGCGATGATCCAGAAAGGCATGGAACCTGACAAAGTGACGTTCTTGTGCGCATTGATAGGGTGCAACCATTCAGGACTGGTTGAAGAAGGAAGATTTGTGTTTGAGTCAATGAAAACCCTTTACGGAATTGAACCAGACTGGAAACATTATTCATGTATGGTTGATCTTCTAGGTCGTGCAGGCCTGTTGGATGAGGCTGAGAAGTTGCTGCAAAAGGTGCCAGAAAAGGTCAACAGTGTGATCTGGAGCTCCATGTTAAGAAGTTGTAGAATCCATAGAAATGAAACAATCGGAAGGAAAATTGCAAAGTCTTTGGTGGATCTCGAAGCTGAGGATCCTGCCATTCTTTTGCAGGCTTCAAACTTCTATTCTGATATTGGAGAGTTTGGAACCTCAAAGCAACTTAGAGAAGTTGCATTGACAAAAAAATTGGTAAGAGAAATTGGTCACAGTTTAATAGAGGTA

Coding sequence (CDS)

AAATTGGGCAACCTTAACTCTGCCATTAAATTGTTCGCTGAAATGCCTCGTCACGACGTTGTTACCTACAATTTGCTAATAACTGGGTGTCTTCGCAATGGACTTCCAGAGCGCGCATTTGGGTTATACAGCGAAATGGTTTCTCGAGGGATTAGAGAAAGTGCGTCAACATTTACTTCAGTCTTGGGCACTTGTAGCAACATGGATTTTTACAAAGAAGGAAGTCAAATTCACTGCAGAGTGGTTTTTCTTGGATTTAGCTTGAATTTGTTTATTTGTAGCTCTCTAATTGATTACTATATGCGGGTGGGCCTTGATATCGTAGCTTTGAAGGTGTTTGATGAATTGCCACAACGAAATATAGCTGTTTGGAACTTGTTGCTACGTCGGTTTTGTGAACTGGGTCAATTCGAAAAGCTTCTGGAATTTTTCTCGAAAATGCAATTGGAAGGCCCGGATCCAAATGGACTTACTTTTTGCTATTTGCTTCGAGGATTTGGTAACGAAAGGCTCTTAGACGAAGGGAAGCAATTACACTGCCGCGCTGTAAAAATTGGATTGGTCGAACCAAATATCTTTGTTCCAAATGCTTTGGTGGATTTCTACTCTTATTGCAGAAGTTTAACAGAAGCAAAAAAGGCATTTGAATATATTCCAGTAGAGGATGTTATTTCCTGGAATTCGATTGTTGCAGTTTATGCGGACATTGGTTTCTTATCAGAAGCACTTGATTTGTTTTCTCGGATGCATATTTCTGTGAGAACTTTGGAGTGTTGTAACTCTTTAATGACATCTTTATTACACTGTGGTGTCATTGAAGATGTGGTCGAGATGTTTGGATTGATGATTGACGAGGGAATTGAACTTGATGAGGTTACTTTGTCCACAACATTAAAAGCATTATCAATGGCTTCTCCATCAGACTTGACCAGCTGCAGATTGCTCCACTGTTGTGCCATAAAATCAGGCTTTGAATTTAATTCTGTAGTTTCTTGTTCTTTAATGGATGCTTACTCAAGATGTGGTCATGTTGAGCTTTCTTGCAAAGTTTTTGAGGAACTCCCTTCCCCAGGTGTCATTTGTTTCACCTCAATCATTAATGGATATGCCCGAAATGGAATGGGGAGGGAGGGTATTGAAATTCTCAAGGCGATGATCCAGAAAGGCATGGAACCTGACAAAGTGACGTTCTTGTGCGCATTGATAGGGTGCAACCATTCAGGACTGGTTGAAGAAGGAAGATTTGTGTTTGAGTCAATGAAAACCCTTTACGGAATTGAACCAGACTGGAAACATTATTCATGTATGGTTGATCTTCTAGGTCGTGCAGGCCTGTTGGATGAGGCTGAGAAGTTGCTGCAAAAGGTGCCAGAAAAGGTCAACAGTGTGATCTGGAGCTCCATGTTAAGAAGTTGTAGAATCCATAGAAATGAAACAATCGGAAGGAAAATTGCAAAGTCTTTGGTGGATCTCGAAGCTGAGGATCCTGCCATTCTTTTGCAGGCTTCAAACTTCTATTCTGATATTGGAGAGTTTGGAACCTCAAAGCAACTTAGAGAAGTTGCATTGACAAAAAAATTGGTAAGAGAAATTGGTCACAGTTTAATAGAGGTA

Protein sequence

KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALDLFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKIAKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSLIEV
Homology
BLAST of MS000897 vs. NCBI nr
Match: XP_022131310.1 (pentatricopeptide repeat-containing protein At4g39530 isoform X1 [Momordica charantia] >XP_022131311.1 pentatricopeptide repeat-containing protein At4g39530 isoform X1 [Momordica charantia] >XP_022131312.1 pentatricopeptide repeat-containing protein At4g39530 isoform X1 [Momordica charantia])

HSP 1 Score: 1050.8 bits (2716), Expect = 4.0e-303
Identity = 536/607 (88.30%), Postives = 536/607 (88.30%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPER FGLYSEMVSRGIRESASTFTS
Sbjct: 59  KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERGFGLYSEMVSRGIRESASTFTS 118

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN
Sbjct: 119 VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 178

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC
Sbjct: 179 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 238

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS
Sbjct: 239 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 298

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           EALDLFSRM                                                   
Sbjct: 299 EALDLFSRMQFWGKRPSIRSLMALLNLSSRTGNIQLGKQIQSCALKMGFGHESSHLQSAL 358

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE
Sbjct: 359 INMYGKCLDIESSVAVYRSISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 418

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF
Sbjct: 419 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 478

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE
Sbjct: 479 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 538

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS
Sbjct: 539 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 598

BLAST of MS000897 vs. NCBI nr
Match: XP_022131313.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 1030.4 bits (2663), Expect = 5.5e-297
Identity = 525/596 (88.09%), Postives = 525/596 (88.09%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPER FGLYSEMVSRGIRESASTFTS
Sbjct: 59  KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERGFGLYSEMVSRGIRESASTFTS 118

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN
Sbjct: 119 VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 178

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC
Sbjct: 179 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 238

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS
Sbjct: 239 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 298

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           EALDLFSRM                                                   
Sbjct: 299 EALDLFSRMQFWGKRPSIRSLMALLNLSSRTGNIQLGKQIQSCALKMGFGHESSHLQSAL 358

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE
Sbjct: 359 INMYGKCLDIESSVAVYRSISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 418

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF
Sbjct: 419 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 478

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE
Sbjct: 479 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 538

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 528
           EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS
Sbjct: 539 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 598

BLAST of MS000897 vs. NCBI nr
Match: XP_023545642.1 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545643.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545644.1 pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932.6 bits (2409), Expect = 1.6e-267
Identity = 477/607 (78.58%), Postives = 503/607 (82.87%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G+LN+AIKLF EMP HDVVTYNLLI+GC R+G PERA GLYS+MV RGIRESASTFTS
Sbjct: 53  KFGHLNAAIKLFDEMPLHDVVTYNLLISGCFRHGHPERALGLYSQMVLRGIRESASTFTS 112

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSN DF KEGSQIHCRVVFLGFSLNLFI +SLIDYYMR+GLDIVALK+FDELPQRN
Sbjct: 113 VLGTCSNTDFSKEGSQIHCRVVFLGFSLNLFIGTSLIDYYMRMGLDIVALKLFDELPQRN 172

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLL  FSKMQLEG +PNGLT CYLLRG GNERLLDEG+QLH 
Sbjct: 173 IAVWNLLLRRFCELGQFEKLLGSFSKMQLEGVEPNGLTLCYLLRGVGNERLLDEGRQLHS 232

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFVPNALVDFYS CRSLTEAKKAFE IP+EDVISWNSIVAVYADIGFLS
Sbjct: 233 RAVKIGLVESNIFVPNALVDFYSDCRSLTEAKKAFECIPLEDVISWNSIVAVYADIGFLS 292

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 293 ESLELFSRMQFWGKRPSIRSLMAFLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 352

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDV+EMFGLM DEGI LDE
Sbjct: 353 INMYGKCFDIESSVAVYESISVRTLECCNSLMTSLLHCGVIEDVIEMFGLMADEGIGLDE 412

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSM+SP+DLT CRLLHCCAIKSG  FNSVVSCSLMD+YSRCGHVELSCKVF
Sbjct: 413 VTLSTTLKALSMSSPTDLTGCRLLHCCAIKSGLGFNSVVSCSLMDSYSRCGHVELSCKVF 472

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNGMG+EGIE+LK MIQKG +PDKVTFLCALIGCNHSGLVE
Sbjct: 473 EEIHSPGVICFTSIINGYARNGMGKEGIEMLKTMIQKGWKPDKVTFLCALIGCNHSGLVE 532

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKT+ GIEPDWKHYSCMVDLLGR GLLDEAEKLL KVPEKVN VIWSSMLRS
Sbjct: 533 EGRFVFELMKTVCGIEPDWKHYSCMVDLLGRVGLLDEAEKLLLKVPEKVNGVIWSSMLRS 592

BLAST of MS000897 vs. NCBI nr
Match: XP_022961634.1 (pentatricopeptide repeat-containing protein At4g39530 [Cucurbita moschata] >XP_022961635.1 pentatricopeptide repeat-containing protein At4g39530 [Cucurbita moschata] >XP_022961636.1 pentatricopeptide repeat-containing protein At4g39530 [Cucurbita moschata])

HSP 1 Score: 927.9 bits (2397), Expect = 3.9e-266
Identity = 476/607 (78.42%), Postives = 502/607 (82.70%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G+LN+AIKLF EMP HDVVTYNLLI+GC R+G PERA GLYS+MV RGIRESASTFTS
Sbjct: 53  KFGHLNAAIKLFDEMPLHDVVTYNLLISGCFRHGHPERALGLYSQMVLRGIRESASTFTS 112

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSN DF KEGSQIHCRVVFLGFSLNLFI +SLIDYYMR+GLDIVALK+FDELPQRN
Sbjct: 113 VLGTCSNTDFSKEGSQIHCRVVFLGFSLNLFIGTSLIDYYMRMGLDIVALKLFDELPQRN 172

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLL  FSKMQLEG +PNGLT CYLLRG GNERLLDEG+QLH 
Sbjct: 173 IAVWNLLLRRFCELGQFEKLLGSFSKMQLEGVEPNGLTLCYLLRGVGNERLLDEGRQLHS 232

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFVPNALVDFYS CRSLTEAKKAFE IP++DVISWNSIVAVYADIGFLS
Sbjct: 233 RAVKIGLVESNIFVPNALVDFYSDCRSLTEAKKAFECIPLDDVISWNSIVAVYADIGFLS 292

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 293 ESLELFSRMQFWGKRPSIRSLMAFLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 352

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLEC NSLMTSLLHCGVIEDV+EMFGLM DEGI LDE
Sbjct: 353 INMYGKCFDIESSVAVYESISVRTLECSNSLMTSLLHCGVIEDVIEMFGLMADEGIGLDE 412

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSM+SP+DLT CRLLHCCAIKSG  FNSVVSCSLMD+YSRCGHVELSCKVF
Sbjct: 413 VTLSTTLKALSMSSPTDLTGCRLLHCCAIKSGLGFNSVVSCSLMDSYSRCGHVELSCKVF 472

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNGMG+EGIE+LK MIQKG +PDKVTFLCALIGCNHSGLVE
Sbjct: 473 EEIHSPGVICFTSIINGYARNGMGKEGIEMLKTMIQKGWKPDKVTFLCALIGCNHSGLVE 532

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKT+ GIEPDWKHYSCMVDLLGR GLLDEAEKLL KVPEKVN VIWSSMLRS
Sbjct: 533 EGRFVFELMKTVCGIEPDWKHYSCMVDLLGRVGLLDEAEKLLLKVPEKVNGVIWSSMLRS 592

BLAST of MS000897 vs. NCBI nr
Match: XP_022997612.1 (pentatricopeptide repeat-containing protein At4g39530 [Cucurbita maxima] >XP_022997613.1 pentatricopeptide repeat-containing protein At4g39530 [Cucurbita maxima] >XP_022997614.1 pentatricopeptide repeat-containing protein At4g39530 [Cucurbita maxima])

HSP 1 Score: 924.5 bits (2388), Expect = 4.3e-265
Identity = 474/607 (78.09%), Postives = 501/607 (82.54%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G+L++AIKLF EMP HDVVTYNLLI+GC R+G PERAFGLYS+MV RGIRESASTFTS
Sbjct: 53  KFGHLSAAIKLFDEMPLHDVVTYNLLISGCFRHGHPERAFGLYSQMVLRGIRESASTFTS 112

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSN DF KEGSQIHCRVVFLGFSLNLFI +SLIDYYMR+GLDIVALK+FDELPQRN
Sbjct: 113 VLGTCSNADFSKEGSQIHCRVVFLGFSLNLFIGTSLIDYYMRMGLDIVALKLFDELPQRN 172

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLL  FSKMQLEG +PNGLT CYLLRG GNERLLDEG+QLH 
Sbjct: 173 IAVWNLLLRRFCELGQFEKLLGSFSKMQLEGVEPNGLTLCYLLRGVGNERLLDEGRQLHS 232

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFVPNALVDFYS CRSLTEAKKAFE IP+EDVISWNSIVAVYADIGFLS
Sbjct: 233 RAVKIGLVESNIFVPNALVDFYSDCRSLTEAKKAFECIPLEDVISWNSIVAVYADIGFLS 292

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 293 ESLELFSRMQFWGKRPSIRSLMAFLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 352

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDV+EMFGLM DEGI LDE
Sbjct: 353 INMYGKCFDIESSVAVYESISVRTLECCNSLMTSLLHCGVIEDVIEMFGLMADEGIGLDE 412

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSM+SP+DLT CRLLHCCAIKSG  FNSVVSCSLMD+YSRCGHVELSCKVF
Sbjct: 413 VTLSTTLKALSMSSPTDLTGCRLLHCCAIKSGLGFNSVVSCSLMDSYSRCGHVELSCKVF 472

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNGMG+EGI++LK MIQKG +PDKVTFLCALIGCNHSGLVE
Sbjct: 473 EEIHSPGVICFTSIINGYARNGMGKEGIQMLKTMIQKGWKPDKVTFLCALIGCNHSGLVE 532

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKT+ GIEPDWKHYSCMVDLLGR GLLDEAEKLL KVPEKVN V WSSMLRS
Sbjct: 533 EGRFVFELMKTVCGIEPDWKHYSCMVDLLGRVGLLDEAEKLLLKVPEKVNGVSWSSMLRS 592

BLAST of MS000897 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.2e-82
Identity = 170/544 (31.25%), Postives = 298/544 (54.78%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLG L+ A  LF  MP  D  T+N +++G  ++   E A   ++ M   G   +  +F S
Sbjct: 98  KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VL  CS ++   +G Q+H  +    F  +++I S+L+D Y + G    A +VFDE+  RN
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           +  WN L+  F + G   + L+ F  M     +P+ +T   ++    +   +  G+++H 
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           R VK   +  +I + NA VD Y+ C  + EA+  F+ +P+ +VI+  S+++ YA      
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337

Query: 241 EALDLFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKA 300
            A  +F++M  + R +   N+L+      G  E+ + +F L+  E +     + +  LKA
Sbjct: 338 AARLMFTKM--AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 301 LSMASPSDLTSCRLLHCCAIKSGFEFNS------VVSCSLMDAYSRCGHVELSCKVFEEL 360
              A  ++L      H   +K GF+F S       V  SL+D Y +CG VE    VF ++
Sbjct: 398 --CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 457

Query: 361 PSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGR 420
                + + ++I G+A+NG G E +E+ + M++ G +PD +T +  L  C H+G VEEGR
Sbjct: 458 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 517

Query: 421 FVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRI 480
             F SM   +G+ P   HY+CMVDLLGRAG L+EA+ +++++P + +SVIW S+L +C++
Sbjct: 518 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 577

Query: 481 HRNETIGRKIAKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHS 539
           HRN T+G+ +A+ L+++E  +    +  SN Y+++G++     +R+    + + ++ G S
Sbjct: 578 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 637

BLAST of MS000897 vs. ExPASy Swiss-Prot
Match: Q9S7F4 (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.2e-80
Identity = 167/535 (31.21%), Postives = 278/535 (51.96%), Query Frame = 0

Query: 5   LNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLGT 64
           L+ A  LF E+P  D VT+N LITG  ++GL   +  L+ +M   G + S  TF+ VL  
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259

Query: 65  CSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAVW 124
              +  +  G Q+H   V  GFS +  + + ++D+Y +    +    +FDE+P+ +   +
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319

Query: 125 NLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVK 184
           N+++  + +  Q+E  L FF +MQ  G D     F  +L    N   L  G+QLHC+A+ 
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL- 379

Query: 185 IGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALD 244
           +   +  + V N+LVD Y+ C    EA+  F+ +P    +SW ++++ Y   G     L 
Sbjct: 380 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 439

Query: 245 LFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMA 304
           LF++M  S                                  +  D+ T +T LKA   A
Sbjct: 440 LFTKMRGS---------------------------------NLRADQSTFATVLKA--SA 499

Query: 305 SPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTS 364
           S + L   + LH   I+SG   N      L+D Y++CG ++ + +VFEE+P    + + +
Sbjct: 500 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 559

Query: 365 IINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLY 424
           +I+ +A NG G   I     MI+ G++PD V+ L  L  C+H G VE+G   F++M  +Y
Sbjct: 560 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 619

Query: 425 GIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKI 484
           GI P  KHY+CM+DLLGR G   EAEKL+ ++P + + ++WSS+L +CRIH+N+++  + 
Sbjct: 620 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 679

Query: 485 AKSLVDLE-AEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSLIEV 539
           A+ L  +E   D A  +  SN Y+  GE+   + +++    + + +   +S +EV
Sbjct: 680 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698

BLAST of MS000897 vs. ExPASy Swiss-Prot
Match: O49287 (Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E5 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-77
Identity = 186/561 (33.16%), Postives = 292/561 (52.05%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G L+ A +LF  MP  DVVT N L+ G + NG  E A  L+ E+        A T T+
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTT 195

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVG--------LDIV---- 120
           VL  C+ ++  K G QIH +++  G   +  + SSL++ Y + G        L+ +    
Sbjct: 196 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 255

Query: 121 -------------------ALKVFDELPQRNIAVWNLLLRRFCELGQFEKLLEFFSKMQL 180
                              +  +FD    R + +WN ++  +       + L  F++M+ 
Sbjct: 256 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN 315

Query: 181 EGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVKIGLVEPNIFVPNALVDFYSYCRSLT 240
           E  + +  T   ++        L+ GKQ+HC A K GL++ +I V + L+D YS C S  
Sbjct: 316 ETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPM 375

Query: 241 EAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALDLFSRMHISVRTLECCNSLMTSLLHC 300
           EA K F  +   D I  NS++ VY   G + +A  +F R  I  ++L   NS+       
Sbjct: 376 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER--IENKSLISWNSMTNGFSQN 435

Query: 301 GVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSV 360
           G   + +E F  M    +  DEV+LS+ + A   AS S L     +   A   G + + V
Sbjct: 436 GCTVETLEYFHQMHKLDLPTDEVSLSSVISA--CASISSLELGEQVFARATIVGLDSDQV 495

Query: 361 VSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKG 420
           VS SL+D Y +CG VE   +VF+ +     + + S+I+GYA NG G E I++ K M   G
Sbjct: 496 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 555

Query: 421 MEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEA 480
           + P ++TF+  L  CN+ GLVEEGR +FESMK  +G  PD +H+SCMVDLL RAG ++EA
Sbjct: 556 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 615

Query: 481 EKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKIAKSLVDLEAEDPAILLQASNFYSDI 531
             L++++P  V+  +WSS+LR C  +  + +G+K A+ +++LE E+    +Q S  ++  
Sbjct: 616 INLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 675

BLAST of MS000897 vs. ExPASy Swiss-Prot
Match: P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-75
Identity = 173/534 (32.40%), Postives = 285/534 (53.37%), Query Frame = 0

Query: 8   AIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLGTCSN 67
           A K+F  MP  +VV+++ L++G + NG  + +  L+SEM  +GI  +  TF++ L  C  
Sbjct: 60  AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119

Query: 68  MDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAVWNLL 127
           ++  ++G QIH   + +GF + + + +SL+D Y + G    A KVF  +  R++  WN +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179

Query: 128 LRRFCELGQFEKLLEFFSKMQLEG--PDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVKI 187
           +  F   G   K L+ F  MQ       P+  T   LL+   +  ++  GKQ+H   V+ 
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239

Query: 188 GLVEP-NIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALD 247
           G   P +  +  +LVD Y  C  L  A+KAF+ I  + +ISW+S++  YA  G   EA+ 
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299

Query: 248 LFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMA 307
           LF R       L+  NS + S     +I       G+  D  +    +     ++AL++ 
Sbjct: 300 LFKR-------LQELNSQIDSFALSSII-------GVFADFAL----LRQGKQMQALAVK 359

Query: 308 SPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTS 367
            PS L +  L            NSVV     D Y +CG V+ + K F E+    VI +T 
Sbjct: 360 LPSGLETSVL------------NSVV-----DMYLKCGLVDEAEKCFAEMQLKDVISWTV 419

Query: 368 IINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLY 427
           +I GY ++G+G++ + I   M++  +EPD+V +L  L  C+HSG+++EG  +F  +   +
Sbjct: 420 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 479

Query: 428 GIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKI 487
           GI+P  +HY+C+VDLLGRAG L EA+ L+  +P K N  IW ++L  CR+H +  +G+++
Sbjct: 480 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 539

Query: 488 AKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSLIEV 539
            K L+ ++A++PA  +  SN Y   G +      RE+   K L +E G S +E+
Sbjct: 540 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558

BLAST of MS000897 vs. ExPASy Swiss-Prot
Match: Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-74
Identity = 171/542 (31.55%), Postives = 269/542 (49.63%), Query Frame = 0

Query: 4   NLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLG 63
           NL+ A  +F  +    V  +N +I G   +  P++A   Y EM+ +G      TF  VL 
Sbjct: 56  NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115

Query: 64  TCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAV 123
            CS +   + GS +H  VV  GF +N+++ + L+  YM  G     L+VF+++PQ N+  
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175

Query: 124 WNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAV 183
           W  L+  F    +F   +E F +MQ  G   N      LL   G  + +  GK  H    
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235

Query: 184 KIGL-------VEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADI 243
            +G        V  N+ +  +L+D Y+ C  L  A+  F+ +P   ++SWNSI+  Y+  
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295

Query: 244 GFLSEALDLFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLST 303
           G   EAL                         C        MF  M+D GI  D+VT  +
Sbjct: 296 GDAEEAL-------------------------C--------MFLDMLDLGIAPDKVTFLS 355

Query: 304 TLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPS 363
            ++A  +   S L   + +H    K+GF  ++ + C+L++ Y++ G  E + K FE+L  
Sbjct: 356 VIRASMIQGCSQLG--QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 415

Query: 364 PGVICFTSIINGYARNGMGREGIEILKAMIQKG-MEPDKVTFLCALIGCNHSGLVEEGRF 423
              I +T +I G A +G G E + I + M +KG   PD +T+L  L  C+H GLVEEG+ 
Sbjct: 416 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 475

Query: 424 VFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIH 483
            F  M+ L+G+EP  +HY CMVD+L RAG  +EAE+L++ +P K N  IW ++L  C IH
Sbjct: 476 YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 535

Query: 484 RNETIGRKIAKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSL 538
            N  +  +I   + + E     I +  SN Y+  G +   K +RE   +K++ + +GHS 
Sbjct: 536 ENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSS 562

BLAST of MS000897 vs. ExPASy TrEMBL
Match: A0A6J1BQN5 (pentatricopeptide repeat-containing protein At4g39530 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004572 PE=4 SV=1)

HSP 1 Score: 1050.8 bits (2716), Expect = 1.9e-303
Identity = 536/607 (88.30%), Postives = 536/607 (88.30%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPER FGLYSEMVSRGIRESASTFTS
Sbjct: 59  KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERGFGLYSEMVSRGIRESASTFTS 118

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN
Sbjct: 119 VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 178

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC
Sbjct: 179 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 238

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS
Sbjct: 239 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 298

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           EALDLFSRM                                                   
Sbjct: 299 EALDLFSRMQFWGKRPSIRSLMALLNLSSRTGNIQLGKQIQSCALKMGFGHESSHLQSAL 358

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE
Sbjct: 359 INMYGKCLDIESSVAVYRSISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 418

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF
Sbjct: 419 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 478

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE
Sbjct: 479 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 538

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS
Sbjct: 539 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 598

BLAST of MS000897 vs. ExPASy TrEMBL
Match: A0A6J1BT01 (pentatricopeptide repeat-containing protein At1g74600, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004572 PE=4 SV=1)

HSP 1 Score: 1030.4 bits (2663), Expect = 2.7e-297
Identity = 525/596 (88.09%), Postives = 525/596 (88.09%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPER FGLYSEMVSRGIRESASTFTS
Sbjct: 59  KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERGFGLYSEMVSRGIRESASTFTS 118

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN
Sbjct: 119 VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 178

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC
Sbjct: 179 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 238

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS
Sbjct: 239 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 298

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           EALDLFSRM                                                   
Sbjct: 299 EALDLFSRMQFWGKRPSIRSLMALLNLSSRTGNIQLGKQIQSCALKMGFGHESSHLQSAL 358

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE
Sbjct: 359 INMYGKCLDIESSVAVYRSISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 418

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF
Sbjct: 419 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 478

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE
Sbjct: 479 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 538

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 528
           EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS
Sbjct: 539 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 598

BLAST of MS000897 vs. ExPASy TrEMBL
Match: A0A6J1HAX1 (pentatricopeptide repeat-containing protein At4g39530 OS=Cucurbita moschata OX=3662 GN=LOC111462350 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 1.9e-266
Identity = 476/607 (78.42%), Postives = 502/607 (82.70%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G+LN+AIKLF EMP HDVVTYNLLI+GC R+G PERA GLYS+MV RGIRESASTFTS
Sbjct: 53  KFGHLNAAIKLFDEMPLHDVVTYNLLISGCFRHGHPERALGLYSQMVLRGIRESASTFTS 112

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSN DF KEGSQIHCRVVFLGFSLNLFI +SLIDYYMR+GLDIVALK+FDELPQRN
Sbjct: 113 VLGTCSNTDFSKEGSQIHCRVVFLGFSLNLFIGTSLIDYYMRMGLDIVALKLFDELPQRN 172

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLL  FSKMQLEG +PNGLT CYLLRG GNERLLDEG+QLH 
Sbjct: 173 IAVWNLLLRRFCELGQFEKLLGSFSKMQLEGVEPNGLTLCYLLRGVGNERLLDEGRQLHS 232

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFVPNALVDFYS CRSLTEAKKAFE IP++DVISWNSIVAVYADIGFLS
Sbjct: 233 RAVKIGLVESNIFVPNALVDFYSDCRSLTEAKKAFECIPLDDVISWNSIVAVYADIGFLS 292

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 293 ESLELFSRMQFWGKRPSIRSLMAFLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 352

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLEC NSLMTSLLHCGVIEDV+EMFGLM DEGI LDE
Sbjct: 353 INMYGKCFDIESSVAVYESISVRTLECSNSLMTSLLHCGVIEDVIEMFGLMADEGIGLDE 412

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSM+SP+DLT CRLLHCCAIKSG  FNSVVSCSLMD+YSRCGHVELSCKVF
Sbjct: 413 VTLSTTLKALSMSSPTDLTGCRLLHCCAIKSGLGFNSVVSCSLMDSYSRCGHVELSCKVF 472

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNGMG+EGIE+LK MIQKG +PDKVTFLCALIGCNHSGLVE
Sbjct: 473 EEIHSPGVICFTSIINGYARNGMGKEGIEMLKTMIQKGWKPDKVTFLCALIGCNHSGLVE 532

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKT+ GIEPDWKHYSCMVDLLGR GLLDEAEKLL KVPEKVN VIWSSMLRS
Sbjct: 533 EGRFVFELMKTVCGIEPDWKHYSCMVDLLGRVGLLDEAEKLLLKVPEKVNGVIWSSMLRS 592

BLAST of MS000897 vs. ExPASy TrEMBL
Match: A0A6J1K5L2 (pentatricopeptide repeat-containing protein At4g39530 OS=Cucurbita maxima OX=3661 GN=LOC111492496 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 2.1e-265
Identity = 474/607 (78.09%), Postives = 501/607 (82.54%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G+L++AIKLF EMP HDVVTYNLLI+GC R+G PERAFGLYS+MV RGIRESASTFTS
Sbjct: 53  KFGHLSAAIKLFDEMPLHDVVTYNLLISGCFRHGHPERAFGLYSQMVLRGIRESASTFTS 112

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSN DF KEGSQIHCRVVFLGFSLNLFI +SLIDYYMR+GLDIVALK+FDELPQRN
Sbjct: 113 VLGTCSNADFSKEGSQIHCRVVFLGFSLNLFIGTSLIDYYMRMGLDIVALKLFDELPQRN 172

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLRRFCELGQFEKLL  FSKMQLEG +PNGLT CYLLRG GNERLLDEG+QLH 
Sbjct: 173 IAVWNLLLRRFCELGQFEKLLGSFSKMQLEGVEPNGLTLCYLLRGVGNERLLDEGRQLHS 232

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFVPNALVDFYS CRSLTEAKKAFE IP+EDVISWNSIVAVYADIGFLS
Sbjct: 233 RAVKIGLVESNIFVPNALVDFYSDCRSLTEAKKAFECIPLEDVISWNSIVAVYADIGFLS 292

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 293 ESLELFSRMQFWGKRPSIRSLMAFLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 352

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDV+EMFGLM DEGI LDE
Sbjct: 353 INMYGKCFDIESSVAVYESISVRTLECCNSLMTSLLHCGVIEDVIEMFGLMADEGIGLDE 412

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKALSM+SP+DLT CRLLHCCAIKSG  FNSVVSCSLMD+YSRCGHVELSCKVF
Sbjct: 413 VTLSTTLKALSMSSPTDLTGCRLLHCCAIKSGLGFNSVVSCSLMDSYSRCGHVELSCKVF 472

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNGMG+EGI++LK MIQKG +PDKVTFLCALIGCNHSGLVE
Sbjct: 473 EEIHSPGVICFTSIINGYARNGMGKEGIQMLKTMIQKGWKPDKVTFLCALIGCNHSGLVE 532

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKT+ GIEPDWKHYSCMVDLLGR GLLDEAEKLL KVPEKVN V WSSMLRS
Sbjct: 533 EGRFVFELMKTVCGIEPDWKHYSCMVDLLGRVGLLDEAEKLLLKVPEKVNGVSWSSMLRS 592

BLAST of MS000897 vs. ExPASy TrEMBL
Match: A0A0A0LMN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348810 PE=4 SV=1)

HSP 1 Score: 902.9 bits (2332), Expect = 6.4e-259
Identity = 461/607 (75.95%), Postives = 500/607 (82.37%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLG+L+SAIKLF EMP HDVVTYNLLI+GCL NG P+RAFG+YS+MV RGIRESASTFTS
Sbjct: 74  KLGHLDSAIKLFDEMPLHDVVTYNLLISGCLHNGYPQRAFGIYSQMVLRGIRESASTFTS 133

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VLGTCSNMDF+KEGSQIHCRVV  GF+LNLFI SSLI +YMR+GL  VALK+FDELPQRN
Sbjct: 134 VLGTCSNMDFFKEGSQIHCRVVLFGFTLNLFIASSLIGFYMRMGLHTVALKLFDELPQRN 193

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           IAVWNLLLR  CEL QFEKL  FFSKMQLEG +PNGLTF YLLRGFGNE+LLDEGKQLH 
Sbjct: 194 IAVWNLLLRWCCELRQFEKLQGFFSKMQLEGLEPNGLTFSYLLRGFGNEKLLDEGKQLHN 253

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           RAVKIGLVE NIFV NALVDFY+ CRSLTEAK AFE IP+++VISWNSIVAVYAD+GFLS
Sbjct: 254 RAVKIGLVESNIFVQNALVDFYADCRSLTEAKNAFECIPLDNVISWNSIVAVYADVGFLS 313

Query: 241 EALDLFSRMH-------------------------------------------------- 300
           E+L+LFSRM                                                   
Sbjct: 314 ESLELFSRMQFWGKRPSIRSLMALLNLSSRTRNIQLGKQIQSCALKLGFGHESSHLQSAL 373

Query: 301 -------------------ISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                              ISVRTLECCNSLMTSLLHCGVIEDV+EMFGLM+DE I LDE
Sbjct: 374 INMYGRCLDIESSVAVYESISVRTLECCNSLMTSLLHCGVIEDVIEMFGLMVDERIGLDE 433

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLSTTLKA+S+ SP DL+ CRLLHCCAIKSGFEF+SVVSCSLMD+YSRCGHVELS KVF
Sbjct: 434 VTLSTTLKAISICSP-DLSRCRLLHCCAIKSGFEFSSVVSCSLMDSYSRCGHVELSWKVF 493

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           EE+ SPGVICFTSIINGYARNG+G+EG+EILK MIQ+G++PDKVTFLCALIGCNHSGLVE
Sbjct: 494 EEIYSPGVICFTSIINGYARNGLGKEGVEILKMMIQRGLKPDKVTFLCALIGCNHSGLVE 553

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EGRFVFE MKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKL+QKVPEKVN VIWSSMLRS
Sbjct: 554 EGRFVFELMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLIQKVPEKVNGVIWSSMLRS 613

BLAST of MS000897 vs. TAIR 10
Match: AT1G23450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 578.6 bits (1490), Expect = 5.4e-165
Identity = 302/607 (49.75%), Postives = 403/607 (66.39%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K GNL SA + F EM   DVVTYNLLI+G  R G   RA  LY+EMVS G+RESASTF S
Sbjct: 58  KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VL  CS+  F +EG Q+HCRV+ LGF  N+F+ S+L+  Y  + L  VALK+FDE+  RN
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           +AV NLLLR FC+ G+ ++L E + +M+LEG   NGLT+CY++RG  ++RL+ EGKQLH 
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
             VK G    NIFV N LVD+YS C  L+ + ++F  +P +DVISWNSIV+V AD G + 
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297

Query: 241 EALDLFSRMHI-----SVR----------------------------------------- 300
           ++LDLFS+M       S+R                                         
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357

Query: 301 -----------------------TLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDE 360
                                   LECCNSLMTSL+HCG+ +D++EMFGLMIDEG  +DE
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417

Query: 361 VTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVF 420
           VTLST LKALS++ P  L SC L+HCCAIKSG+  +  VSCSL+DAY++ G  E+S KVF
Sbjct: 418 VTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVF 477

Query: 421 EELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVE 480
           +EL +P + C TSIINGYARNGMG + +++L+ M +  + PD+VT L  L GC+HSGLVE
Sbjct: 478 DELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVE 537

Query: 481 EGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRS 539
           EG  +F+S+++ YGI P  K Y+CMVDLLGRAGL+++AE+LL +     + V WSS+L+S
Sbjct: 538 EGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQS 597

BLAST of MS000897 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 306.2 bits (783), Expect = 5.1e-83
Identity = 170/544 (31.25%), Postives = 298/544 (54.78%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           KLG L+ A  LF  MP  D  T+N +++G  ++   E A   ++ M   G   +  +F S
Sbjct: 98  KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRN 120
           VL  CS ++   +G Q+H  +    F  +++I S+L+D Y + G    A +VFDE+  RN
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217

Query: 121 IAVWNLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHC 180
           +  WN L+  F + G   + L+ F  M     +P+ +T   ++    +   +  G+++H 
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277

Query: 181 RAVKIGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLS 240
           R VK   +  +I + NA VD Y+ C  + EA+  F+ +P+ +VI+  S+++ YA      
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337

Query: 241 EALDLFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKA 300
            A  +F++M  + R +   N+L+      G  E+ + +F L+  E +     + +  LKA
Sbjct: 338 AARLMFTKM--AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 397

Query: 301 LSMASPSDLTSCRLLHCCAIKSGFEFNS------VVSCSLMDAYSRCGHVELSCKVFEEL 360
              A  ++L      H   +K GF+F S       V  SL+D Y +CG VE    VF ++
Sbjct: 398 --CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 457

Query: 361 PSPGVICFTSIINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGR 420
                + + ++I G+A+NG G E +E+ + M++ G +PD +T +  L  C H+G VEEGR
Sbjct: 458 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 517

Query: 421 FVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRI 480
             F SM   +G+ P   HY+CMVDLLGRAG L+EA+ +++++P + +SVIW S+L +C++
Sbjct: 518 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 577

Query: 481 HRNETIGRKIAKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHS 539
           HRN T+G+ +A+ L+++E  +    +  SN Y+++G++     +R+    + + ++ G S
Sbjct: 578 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 637

BLAST of MS000897 vs. TAIR 10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 3.7e-81
Identity = 167/535 (31.21%), Postives = 278/535 (51.96%), Query Frame = 0

Query: 5   LNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLGT 64
           L+ A  LF E+P  D VT+N LITG  ++GL   +  L+ +M   G + S  TF+ VL  
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259

Query: 65  CSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAVW 124
              +  +  G Q+H   V  GFS +  + + ++D+Y +    +    +FDE+P+ +   +
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319

Query: 125 NLLLRRFCELGQFEKLLEFFSKMQLEGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVK 184
           N+++  + +  Q+E  L FF +MQ  G D     F  +L    N   L  G+QLHC+A+ 
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL- 379

Query: 185 IGLVEPNIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALD 244
           +   +  + V N+LVD Y+ C    EA+  F+ +P    +SW ++++ Y   G     L 
Sbjct: 380 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 439

Query: 245 LFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMA 304
           LF++M  S                                  +  D+ T +T LKA   A
Sbjct: 440 LFTKMRGS---------------------------------NLRADQSTFATVLKA--SA 499

Query: 305 SPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTS 364
           S + L   + LH   I+SG   N      L+D Y++CG ++ + +VFEE+P    + + +
Sbjct: 500 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 559

Query: 365 IINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLY 424
           +I+ +A NG G   I     MI+ G++PD V+ L  L  C+H G VE+G   F++M  +Y
Sbjct: 560 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 619

Query: 425 GIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKI 484
           GI P  KHY+CM+DLLGR G   EAEKL+ ++P + + ++WSS+L +CRIH+N+++  + 
Sbjct: 620 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 679

Query: 485 AKSLVDLE-AEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSLIEV 539
           A+ L  +E   D A  +  SN Y+  GE+   + +++    + + +   +S +EV
Sbjct: 680 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698

BLAST of MS000897 vs. TAIR 10
Match: AT1G77010.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-78
Identity = 186/561 (33.16%), Postives = 292/561 (52.05%), Query Frame = 0

Query: 1   KLGNLNSAIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTS 60
           K G L+ A +LF  MP  DVVT N L+ G + NG  E A  L+ E+        A T T+
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTT 195

Query: 61  VLGTCSNMDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVG--------LDIV---- 120
           VL  C+ ++  K G QIH +++  G   +  + SSL++ Y + G        L+ +    
Sbjct: 196 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 255

Query: 121 -------------------ALKVFDELPQRNIAVWNLLLRRFCELGQFEKLLEFFSKMQL 180
                              +  +FD    R + +WN ++  +       + L  F++M+ 
Sbjct: 256 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN 315

Query: 181 EGPDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVKIGLVEPNIFVPNALVDFYSYCRSLT 240
           E  + +  T   ++        L+ GKQ+HC A K GL++ +I V + L+D YS C S  
Sbjct: 316 ETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPM 375

Query: 241 EAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALDLFSRMHISVRTLECCNSLMTSLLHC 300
           EA K F  +   D I  NS++ VY   G + +A  +F R  I  ++L   NS+       
Sbjct: 376 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER--IENKSLISWNSMTNGFSQN 435

Query: 301 GVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMASPSDLTSCRLLHCCAIKSGFEFNSV 360
           G   + +E F  M    +  DEV+LS+ + A   AS S L     +   A   G + + V
Sbjct: 436 GCTVETLEYFHQMHKLDLPTDEVSLSSVISA--CASISSLELGEQVFARATIVGLDSDQV 495

Query: 361 VSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTSIINGYARNGMGREGIEILKAMIQKG 420
           VS SL+D Y +CG VE   +VF+ +     + + S+I+GYA NG G E I++ K M   G
Sbjct: 496 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 555

Query: 421 MEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLYGIEPDWKHYSCMVDLLGRAGLLDEA 480
           + P ++TF+  L  CN+ GLVEEGR +FESMK  +G  PD +H+SCMVDLL RAG ++EA
Sbjct: 556 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 615

Query: 481 EKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKIAKSLVDLEAEDPAILLQASNFYSDI 531
             L++++P  V+  +WSS+LR C  +  + +G+K A+ +++LE E+    +Q S  ++  
Sbjct: 616 INLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATS 675

BLAST of MS000897 vs. TAIR 10
Match: AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-76
Identity = 173/534 (32.40%), Postives = 285/534 (53.37%), Query Frame = 0

Query: 8   AIKLFAEMPRHDVVTYNLLITGCLRNGLPERAFGLYSEMVSRGIRESASTFTSVLGTCSN 67
           A K+F  MP  +VV+++ L++G + NG  + +  L+SEM  +GI  +  TF++ L  C  
Sbjct: 60  AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119

Query: 68  MDFYKEGSQIHCRVVFLGFSLNLFICSSLIDYYMRVGLDIVALKVFDELPQRNIAVWNLL 127
           ++  ++G QIH   + +GF + + + +SL+D Y + G    A KVF  +  R++  WN +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179

Query: 128 LRRFCELGQFEKLLEFFSKMQLEG--PDPNGLTFCYLLRGFGNERLLDEGKQLHCRAVKI 187
           +  F   G   K L+ F  MQ       P+  T   LL+   +  ++  GKQ+H   V+ 
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239

Query: 188 GLVEP-NIFVPNALVDFYSYCRSLTEAKKAFEYIPVEDVISWNSIVAVYADIGFLSEALD 247
           G   P +  +  +LVD Y  C  L  A+KAF+ I  + +ISW+S++  YA  G   EA+ 
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299

Query: 248 LFSRMHISVRTLECCNSLMTSLLHCGVIEDVVEMFGLMIDEGIELDEVTLSTTLKALSMA 307
           LF R       L+  NS + S     +I       G+  D  +    +     ++AL++ 
Sbjct: 300 LFKR-------LQELNSQIDSFALSSII-------GVFADFAL----LRQGKQMQALAVK 359

Query: 308 SPSDLTSCRLLHCCAIKSGFEFNSVVSCSLMDAYSRCGHVELSCKVFEELPSPGVICFTS 367
            PS L +  L            NSVV     D Y +CG V+ + K F E+    VI +T 
Sbjct: 360 LPSGLETSVL------------NSVV-----DMYLKCGLVDEAEKCFAEMQLKDVISWTV 419

Query: 368 IINGYARNGMGREGIEILKAMIQKGMEPDKVTFLCALIGCNHSGLVEEGRFVFESMKTLY 427
           +I GY ++G+G++ + I   M++  +EPD+V +L  L  C+HSG+++EG  +F  +   +
Sbjct: 420 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 479

Query: 428 GIEPDWKHYSCMVDLLGRAGLLDEAEKLLQKVPEKVNSVIWSSMLRSCRIHRNETIGRKI 487
           GI+P  +HY+C+VDLLGRAG L EA+ L+  +P K N  IW ++L  CR+H +  +G+++
Sbjct: 480 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 539

Query: 488 AKSLVDLEAEDPAILLQASNFYSDIGEFGTSKQLREVALTKKLVREIGHSLIEV 539
            K L+ ++A++PA  +  SN Y   G +      RE+   K L +E G S +E+
Sbjct: 540 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131310.14.0e-30388.30pentatricopeptide repeat-containing protein At4g39530 isoform X1 [Momordica char... [more]
XP_022131313.15.5e-29788.09pentatricopeptide repeat-containing protein At1g74600, chloroplastic isoform X2 ... [more]
XP_023545642.11.6e-26778.58pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Cucurbita ... [more]
XP_022961634.13.9e-26678.42pentatricopeptide repeat-containing protein At4g39530 [Cucurbita moschata] >XP_0... [more]
XP_022997612.14.3e-26578.09pentatricopeptide repeat-containing protein At4g39530 [Cucurbita maxima] >XP_022... [more]
Match NameE-valueIdentityDescription
Q9SIT77.2e-8231.25Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9S7F45.2e-8031.21Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
O492871.4e-7733.16Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS... [more]
P0C8982.3e-7532.40Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... [more]
Q9MA951.9e-7431.55Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1BQN51.9e-30388.30pentatricopeptide repeat-containing protein At4g39530 isoform X1 OS=Momordica ch... [more]
A0A6J1BT012.7e-29788.09pentatricopeptide repeat-containing protein At1g74600, chloroplastic isoform X2 ... [more]
A0A6J1HAX11.9e-26678.42pentatricopeptide repeat-containing protein At4g39530 OS=Cucurbita moschata OX=3... [more]
A0A6J1K5L22.1e-26578.09pentatricopeptide repeat-containing protein At4g39530 OS=Cucurbita maxima OX=366... [more]
A0A0A0LMN66.4e-25975.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348810 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G23450.15.4e-16549.75Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G13600.15.1e-8331.25Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02010.13.7e-8131.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G77010.11.0e-7833.16Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G15130.11.6e-7632.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 120..166
e-value: 1.2E-8
score: 35.0
coord: 357..404
e-value: 8.4E-8
score: 32.3
coord: 19..65
e-value: 7.3E-13
score: 48.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 332..356
e-value: 0.032
score: 14.5
coord: 432..457
e-value: 0.0022
score: 18.1
coord: 224..250
e-value: 6.6E-4
score: 19.8
coord: 258..287
e-value: 0.017
score: 15.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 123..155
e-value: 8.1E-5
score: 20.5
coord: 21..51
e-value: 1.1E-7
score: 29.5
coord: 360..393
e-value: 3.8E-7
score: 27.9
coord: 258..291
e-value: 1.3E-5
score: 23.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 19..53
score: 12.41921
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..252
score: 8.867749
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 11.027125
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..154
score: 10.840783
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..402
e-value: 5.4E-27
score: 97.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..106
e-value: 6.1E-20
score: 73.3
coord: 403..493
e-value: 3.5E-13
score: 51.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 107..222
e-value: 5.4E-15
score: 57.6
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 1..259
NoneNo IPR availablePANTHERPTHR47925:SF112SUBFAMILY NOT NAMEDcoord: 1..259
coord: 274..535
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 274..535

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS000897.1MS000897.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding