Homology
BLAST of MS000515 vs. NCBI nr
Match:
XP_022141031.1 (RNA-binding protein 2-like isoform X1 [Momordica charantia])
HSP 1 Score: 451.1 bits (1159), Expect = 7.0e-123
Identity = 230/270 (85.19%), Postives = 230/270 (85.19%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE 60
MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE
Sbjct: 10 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE 69
Query: 61 SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR 120
SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR
Sbjct: 70 SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR 129
Query: 121 PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV 180
PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV
Sbjct: 130 PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV 189
Query: 181 DFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAGYKF 240
DFVSPAHAATAMDALQ GYKF
Sbjct: 190 DFVSPAHAATAMDALQ----------------------------------------GYKF 239
Query: 241 DEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
DEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 250 DEFDRDSVNLRLQFARFPGARSGGGHRGKR 239
BLAST of MS000515 vs. NCBI nr
Match:
XP_038897625.1 (RNA-binding protein 2-like isoform X1 [Benincasa hispida])
HSP 1 Score: 409.1 bits (1050), Expect = 3.0e-110
Identity = 213/273 (78.02%), Postives = 220/273 (80.59%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPS---AVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRYTDSQQQPPS AVVGKRPRVD+D TG HELP+YY RQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPAVVGKRPRVDYDPTGLHELPNYYHRQDDRPVLQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 120
INESYERYLRSSQISSY GGQSARPV GGVPGH +NDPPI+GIGGVVSGANVNDRS SFG
Sbjct: 61 INESYERYLRSSQISSY-GGQSARPVGGGVPGHSINDPPILGIGGVVSGANVNDRSTSFG 120
Query: 121 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180
GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRD VVL
Sbjct: 121 GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDPVVL 180
Query: 181 GFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAG 240
GFVDFVSPAHAATAMDALQ G
Sbjct: 181 GFVDFVSPAHAATAMDALQ----------------------------------------G 232
Query: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
BLAST of MS000515 vs. NCBI nr
Match:
XP_004146235.1 (RNA-binding protein 2 isoform X2 [Cucumis sativus] >KGN57648.1 hypothetical protein Csa_011030 [Cucumis sativus])
HSP 1 Score: 405.2 bits (1040), Expect = 4.4e-109
Identity = 209/273 (76.56%), Postives = 222/273 (81.32%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSA---VVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRYTDSQQQPPS+ VVGKRPRVD+D++G HELP+YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 120
INESYERYLR+SQISSY GGQSARPV GGVPGHP+NDPPI+G+GGVVSGANVNDRS SFG
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 120
Query: 121 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180
GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
Query: 181 GFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAG 240
GFVDFVSPAHAATAMDALQ G
Sbjct: 181 GFVDFVSPAHAATAMDALQ----------------------------------------G 232
Query: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
BLAST of MS000515 vs. NCBI nr
Match:
XP_008455996.1 (PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo])
HSP 1 Score: 404.4 bits (1038), Expect = 7.5e-109
Identity = 210/273 (76.92%), Postives = 221/273 (80.95%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSA---VVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRYTDSQQQPPS+ VVGKRPRVD+D+TG HELP+YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 120
INESYERYLR+SQISSY GGQSARPV GGVPGH +NDPPI+GIGGVVSGANVNDRS SFG
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHLMNDPPILGIGGVVSGANVNDRSTSFG 120
Query: 121 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180
GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 121 GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
Query: 181 GFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAG 240
GFVDFVSPAHAATAMDALQ G
Sbjct: 181 GFVDFVSPAHAATAMDALQ----------------------------------------G 232
Query: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
BLAST of MS000515 vs. NCBI nr
Match:
XP_022923072.1 (RNA-binding protein 2-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 402.9 bits (1034), Expect = 2.2e-108
Identity = 210/274 (76.64%), Postives = 221/274 (80.66%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPS---AVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRY+DSQQQPPS +V GKRPRVD+D++G H+LP YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPDYYPRQDDRPILQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVND-PPIVGIGGVVSGANVNDRSASF 120
INESYERYLRSS+ISSY GGQSARPV GGVPGH +ND PPIVGIGGVVSGANVNDRSASF
Sbjct: 61 INESYERYLRSSKISSY-GGQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASF 120
Query: 121 GVGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVV 180
G GRPNVPLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESRNPGRD VV
Sbjct: 121 GGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVV 180
Query: 181 LGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFA 240
LGFVDFVSPAHAATAMDALQ
Sbjct: 181 LGFVDFVSPAHAATAMDALQ---------------------------------------- 233
Query: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
BLAST of MS000515 vs. ExPASy Swiss-Prot
Match:
G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 1.3e-42
Identity = 118/298 (39.60%), Postives = 163/298 (54.70%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDS-----TGGHELPHYYPRQDDRAMIQGIKSV 60
M+D +W PP ++ KRPR ++D+ T G+E+ +Y + + M+ K +
Sbjct: 1 MADGFWNRQQQHLPPPGGML-KRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLNDTKIL 60
Query: 61 DSINESYERYLRSSQISSYGGGQSARPVSGGV---------PGHPVNDPPIVG-IGGVVS 120
S +Y+R+L+S+ ++S+ G+++ V GGV PGH + DP +G + GV
Sbjct: 61 GS---AYDRFLQSAGLTSFNSGEAS--VIGGVGFARGVGELPGHSLGDPSAMGHLSGVGG 120
Query: 121 GANV--NDRSASFG-------VGRP---NVPLPPDASNTLFVEGLPSSCTRREVAHIFRP 180
G ++ N R +FG V RP +PLP DAS+TL+VEGLPS T+REVAHIFRP
Sbjct: 121 GPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFRP 180
Query: 181 FVGYKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLW 240
FVGY+EVRLV KES++ G D ++L FVDF +PA AATA+ ALQ
Sbjct: 181 FVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQ----------------- 240
Query: 241 LLNICTLYLLTDLLHISVELDFAGYKFDEFDRDSVNLRLQFARFPGARSGG-GHRGKR 271
GYK DE + +S LRLQF+R PG RSGG G RGKR
Sbjct: 241 -----------------------GYKVDEINPESSYLRLQFSRSPGRRSGGPGPRGKR 252
BLAST of MS000515 vs. ExPASy Swiss-Prot
Match:
Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 2.0e-40
Identity = 113/291 (38.83%), Postives = 155/291 (53.26%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDS-----TGGHELPHYYPRQDDRAMIQGIKSV 60
M+D YW Q P + + KRPR D++ G+E+ HY R++DR+ +K
Sbjct: 1 MADGYW--NRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEM-HYLSREEDRSGHPMVKDS 60
Query: 61 DSINESYERYLRSSQISSYGGGQSARPVS-------GGVPGHPVNDPP--IVGIGGVVSG 120
+I +Y+RYL+ Q+ S+ G+++ + GG+P H ++DP I GG
Sbjct: 61 KTIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGGPD 120
Query: 121 ANVNDRSASFGVGRPNVP----------LPPDASNTLFVEGLPSSCTRREVAHIFRPFVG 180
N R ++G P P LPPDAS TL++EGLPS CTRREVAHIFRPFVG
Sbjct: 121 LAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVG 180
Query: 181 YKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLN 240
Y+EVRLV+KE+++ G D ++L FVDF +PA AATA+ ALQ
Sbjct: 181 YREVRLVSKEAKHRG-DPLILCFVDFANPACAATALSALQ-------------------- 240
Query: 241 ICTLYLLTDLLHISVELDFAGYKFDEFDRDSVNLRLQFARFPGARSGGGHR 268
GYK DE + +S +LRLQF+R+PG RSGGG R
Sbjct: 241 --------------------GYKVDEINPESSHLRLQFSRYPGPRSGGGPR 246
BLAST of MS000515 vs. ExPASy Swiss-Prot
Match:
A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)
HSP 1 Score: 154.8 bits (390), Expect = 1.4e-36
Identity = 117/284 (41.20%), Postives = 146/284 (51.41%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDS-----TGGHELPHYYPRQDDRAMIQGIKSV 60
M+D YW Q PP + KRPR DF++ T GH YYPR +D +
Sbjct: 1 MADGYWNQQRQQHHPPGGPM-KRPRSDFEAPSSTMTIGHG-GGYYPRDED----LDVPDT 60
Query: 61 DSINESYERYLRSSQISSYGGGQSARPVSGGVPGHPVN----DPPIVGIGGVVS-GANVN 120
+I +Y+RYL+S Q S GG S GG G N D ++ GGV+ N
Sbjct: 61 RTIGSAYDRYLQSVQ-SGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPN 120
Query: 121 DRSASFG----VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKE 180
+ F VGR N LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+
Sbjct: 121 GHTIGFDPPEPVGRRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKD 180
Query: 181 SRNPGRDSVVLGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDL 240
S++ D +VL FVDF +PA AATA+ ALQ
Sbjct: 181 SKHRNGDPIVLCFVDFTNPACAATALSALQ------------------------------ 233
Query: 241 LHISVELDFAGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
GY+ DE + DS LRLQF+R PG+R G RG+R
Sbjct: 241 ----------GYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 233
BLAST of MS000515 vs. ExPASy Swiss-Prot
Match:
F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 98/253 (38.74%), Postives = 127/253 (50.20%), Query Frame = 0
Query: 35 ELPHYYPRQDDRAMIQGIKSVDSINESYERYLRSSQISSYGGGQSARPVSG--------- 94
++ Y + +DR + +K SI +Y+RYL+S Q + + + A P +G
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQ-TFFVPSEEAGPFNGVGMVRQGGS 270
Query: 95 -GVPGHPVNDPPIVGIGG-VVSGANVNDRSASFG----VGRPN---VPLPPDASNTLFVE 154
+PG P + G GG + S N R FG VGRP PLPPD SNTL+VE
Sbjct: 271 NMMPG-PSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVE 330
Query: 155 GLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQ 214
GLPS+C+RREV+HIFRPFVGY+EVRLV ++S++ D VL FVDF + A AATA+ ALQ
Sbjct: 331 GLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQ 390
Query: 215 GMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAGYKFDEFDRDSVNLRLQFAR 268
Y+ DE + DS LRLQF R
Sbjct: 391 ----------------------------------------DYRMDEDEPDSKILRLQFFR 421
BLAST of MS000515 vs. ExPASy Swiss-Prot
Match:
Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 8.8e-28
Identity = 63/109 (57.80%), Postives = 83/109 (76.15%), Query Frame = 0
Query: 89 GHPVNDPPIVGIGGVVSGANVNDRSASFGVGRPNVPLPPDASNTLFVEGLPSSCTRREVA 148
G+ V+ ++G+ G ++ R +G GRP PLPPDAS+TL++EGLP++CTRREV+
Sbjct: 3 GYGVDGQRMMGVVG------MDSRGMGYG-GRPEPPLPPDASSTLYIEGLPANCTRREVS 62
Query: 149 HIFRPFVGYKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQG 198
HIFRPFVG++EVRLVNKESR+PG D VL FVDF +PA A A++ALQG
Sbjct: 63 HIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIALEALQG 104
BLAST of MS000515 vs. ExPASy TrEMBL
Match:
A0A6J1CHS7 (RNA-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011536 PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 3.4e-123
Identity = 230/270 (85.19%), Postives = 230/270 (85.19%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE 60
MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE
Sbjct: 10 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE 69
Query: 61 SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR 120
SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR
Sbjct: 70 SYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFGVGR 129
Query: 121 PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV 180
PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV
Sbjct: 130 PNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFV 189
Query: 181 DFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAGYKF 240
DFVSPAHAATAMDALQ GYKF
Sbjct: 190 DFVSPAHAATAMDALQ----------------------------------------GYKF 239
Query: 241 DEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
DEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 250 DEFDRDSVNLRLQFARFPGARSGGGHRGKR 239
BLAST of MS000515 vs. ExPASy TrEMBL
Match:
A0A0A0L796 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238140 PE=4 SV=1)
HSP 1 Score: 405.2 bits (1040), Expect = 2.1e-109
Identity = 209/273 (76.56%), Postives = 222/273 (81.32%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSA---VVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRYTDSQQQPPS+ VVGKRPRVD+D++G HELP+YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 120
INESYERYLR+SQISSY GGQSARPV GGVPGHP+NDPPI+G+GGVVSGANVNDRS SFG
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 120
Query: 121 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180
GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 121 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
Query: 181 GFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAG 240
GFVDFVSPAHAATAMDALQ G
Sbjct: 181 GFVDFVSPAHAATAMDALQ----------------------------------------G 232
Query: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
BLAST of MS000515 vs. ExPASy TrEMBL
Match:
A0A1S3C3F7 (RNA-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496055 PE=4 SV=1)
HSP 1 Score: 404.4 bits (1038), Expect = 3.6e-109
Identity = 210/273 (76.92%), Postives = 221/273 (80.95%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSA---VVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRYTDSQQQPPS+ VVGKRPRVD+D+TG HELP+YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTTGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVNDPPIVGIGGVVSGANVNDRSASFG 120
INESYERYLR+SQISSY GGQSARPV GGVPGH +NDPPI+GIGGVVSGANVNDRS SFG
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHLMNDPPILGIGGVVSGANVNDRSTSFG 120
Query: 121 VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVL 180
GRPN+PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESR+ GRD VVL
Sbjct: 121 GGRPNIPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 180
Query: 181 GFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAG 240
GFVDFVSPAHAATAMDALQ G
Sbjct: 181 GFVDFVSPAHAATAMDALQ----------------------------------------G 232
Query: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 YKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
BLAST of MS000515 vs. ExPASy TrEMBL
Match:
A0A6J1E554 (RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430853 PE=4 SV=1)
HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 210/274 (76.64%), Postives = 221/274 (80.66%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPS---AVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRY+DSQQQPPS +V GKRPRVD+D++G H+LP YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPDYYPRQDDRPILQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVND-PPIVGIGGVVSGANVNDRSASF 120
INESYERYLRSS+ISSY GGQSARPV GGVPGH +ND PPIVGIGGVVSGANVNDRSASF
Sbjct: 61 INESYERYLRSSKISSY-GGQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASF 120
Query: 121 GVGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVV 180
G GRPNVPLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESRNPGRD VV
Sbjct: 121 GGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDPVV 180
Query: 181 LGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFA 240
LGFVDFVSPAHAATAMDALQ
Sbjct: 181 LGFVDFVSPAHAATAMDALQ---------------------------------------- 233
Query: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
BLAST of MS000515 vs. ExPASy TrEMBL
Match:
A0A6J1J2D2 (RNA-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482785 PE=4 SV=1)
HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108
Identity = 210/274 (76.64%), Postives = 222/274 (81.02%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPS---AVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDS 60
MSDAYWRY+DSQQQPPS +V GKRPRVD+D++G H+LP+YYPRQDDR ++QGIKSVDS
Sbjct: 1 MSDAYWRYSDSQQQPPSSVPSVAGKRPRVDYDTSGPHDLPNYYPRQDDRPILQGIKSVDS 60
Query: 61 INESYERYLRSSQISSYGGGQSARPVSGGVPGHPVND-PPIVGIGGVVSGANVNDRSASF 120
INESYERYLRSS+ISSY G QSARPV GGVPGH +ND PPIVGIGGVVSGANVNDRSASF
Sbjct: 61 INESYERYLRSSKISSY-GEQSARPVGGGVPGHSINDPPPIVGIGGVVSGANVNDRSASF 120
Query: 121 GVGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVV 180
G GRPNVPLPPDASNTLFVEGLPSSCTRRE+AHIFRPFVGYKEVRLVNKESRNPGRDSVV
Sbjct: 121 GGGRPNVPLPPDASNTLFVEGLPSSCTRREIAHIFRPFVGYKEVRLVNKESRNPGRDSVV 180
Query: 181 LGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFA 240
LGFVDFVSPAHAATAMDALQ
Sbjct: 181 LGFVDFVSPAHAATAMDALQ---------------------------------------- 233
Query: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR
Sbjct: 241 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 233
BLAST of MS000515 vs. TAIR 10
Match:
AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 154.8 bits (390), Expect = 9.6e-38
Identity = 117/284 (41.20%), Postives = 146/284 (51.41%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDS-----TGGHELPHYYPRQDDRAMIQGIKSV 60
M+D YW Q PP + KRPR DF++ T GH YYPR +D +
Sbjct: 1 MADGYWNQQRQQHHPPGGPM-KRPRSDFEAPSSTMTIGHG-GGYYPRDED----LDVPDT 60
Query: 61 DSINESYERYLRSSQISSYGGGQSARPVSGGVPGHPVN----DPPIVGIGGVVS-GANVN 120
+I +Y+RYL+S Q S GG S GG G N D ++ GGV+ N
Sbjct: 61 RTIGSAYDRYLQSVQ-SGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPN 120
Query: 121 DRSASFG----VGRPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKE 180
+ F VGR N LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+
Sbjct: 121 GHTIGFDPPEPVGRRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKD 180
Query: 181 SRNPGRDSVVLGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDL 240
S++ D +VL FVDF +PA AATA+ ALQ
Sbjct: 181 SKHRNGDPIVLCFVDFTNPACAATALSALQ------------------------------ 233
Query: 241 LHISVELDFAGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
GY+ DE + DS LRLQF+R PG+R G RG+R
Sbjct: 241 ----------GYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 233
BLAST of MS000515 vs. TAIR 10
Match:
AT1G21320.2 (nucleotide binding;nucleic acid binding )
HSP 1 Score: 148.7 bits (374), Expect = 6.9e-36
Identity = 112/295 (37.97%), Postives = 143/295 (48.47%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQP----PSAVVGKRPRVDFDST----GGHELPHYYPRQDDRAMIQGI 60
M+D YW Q P P + KRPR DF T ++ Y + +DR + +
Sbjct: 1 MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSGDMHSYLSQDEDRGIPHSV 60
Query: 61 KSVDSINESYERYLRSSQISSYGGGQSARPVSG----------GVPGHPVNDPPIVGIGG 120
K SI +Y+RYL+S Q + + + A P +G +PG P + G GG
Sbjct: 61 KDTRSIGSAYDRYLQSMQ-TFFVPSEEAGPFNGVGMVRQGGSNMMPG-PSMGELMAGCGG 120
Query: 121 -VVSGANVNDRSASFG----VGRPN---VPLPPDASNTLFVEGLPSSCTRREVAHIFRPF 180
+ S N R FG VGRP PLPPD SNTL+VEGLPS+C+RREV+HIFRPF
Sbjct: 121 SLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPF 180
Query: 181 VGYKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQGMLASALIINFLPFVLWL 240
VGY+EVRLV ++S++ D VL FVDF + A AATA+ ALQ
Sbjct: 181 VGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQ------------------ 240
Query: 241 LNICTLYLLTDLLHISVELDFAGYKFDEFDRDSVNLRLQFARFPGARSG--GGHR 268
Y+ DE + DS LRLQF R PG R G GG R
Sbjct: 241 ----------------------DYRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 253
BLAST of MS000515 vs. TAIR 10
Match:
AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 133.3 bits (334), Expect = 3.0e-31
Identity = 103/271 (38.01%), Postives = 126/271 (46.49%), Query Frame = 0
Query: 1 MSDAYWRYTDSQQQPPSAVVGKRPRVDFDSTGGHELPHYYPRQDDRAMIQGIKSVDSINE 60
M+D YW Q PP + KRPR DF GG G +V +I++
Sbjct: 1 MADGYWNQQRQQHHPPGGPM-KRPRSDFGGGGG----------------GGGGNVQTIDD 60
Query: 61 SYERYLRSSQISSYGGGQSARPVSGGVPGHPVN-DPPIVGIGGVVSGANVNDRSASFGVG 120
R GG P+ G GH + DPP VG
Sbjct: 61 FMLR----------RGG--VLPLDHGPNGHTIGFDPP-------------------EPVG 120
Query: 121 RPNVPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGF 180
R N LP DASNTL+VEGLPS+C+RREVAHIFRPFVGY+EVRLV K+S++ D +VL F
Sbjct: 121 RRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCF 179
Query: 181 VDFVSPAHAATAMDALQGMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAGYK 240
VDF +PA AATA+ ALQ GY+
Sbjct: 181 VDFTNPACAATALSALQ----------------------------------------GYR 179
Query: 241 FDEFDRDSVNLRLQFARFPGARSGGGHRGKR 271
DE + DS LRLQF+R PG+R G RG+R
Sbjct: 241 MDENESDSKFLRLQFSRKPGSRP--GQRGRR 179
BLAST of MS000515 vs. TAIR 10
Match:
AT1G21320.1 (nucleotide binding;nucleic acid binding )
HSP 1 Score: 132.9 bits (333), Expect = 3.9e-31
Identity = 98/253 (38.74%), Postives = 127/253 (50.20%), Query Frame = 0
Query: 35 ELPHYYPRQDDRAMIQGIKSVDSINESYERYLRSSQISSYGGGQSARPVSG--------- 94
++ Y + +DR + +K SI +Y+RYL+S Q + + + A P +G
Sbjct: 211 DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQ-TFFVPSEEAGPFNGVGMVRQGGS 270
Query: 95 -GVPGHPVNDPPIVGIGG-VVSGANVNDRSASFG----VGRPN---VPLPPDASNTLFVE 154
+PG P + G GG + S N R FG VGRP PLPPD SNTL+VE
Sbjct: 271 NMMPG-PSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVE 330
Query: 155 GLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLGFVDFVSPAHAATAMDALQ 214
GLPS+C+RREV+HIFRPFVGY+EVRLV ++S++ D VL FVDF + A AATA+ ALQ
Sbjct: 331 GLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQ 390
Query: 215 GMLASALIINFLPFVLWLLNICTLYLLTDLLHISVELDFAGYKFDEFDRDSVNLRLQFAR 268
Y+ DE + DS LRLQF R
Sbjct: 391 ----------------------------------------DYRMDEDEPDSKILRLQFFR 421
BLAST of MS000515 vs. TAIR 10
Match:
AT2G47580.1 (spliceosomal protein U1A )
HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 0
Query: 120 RPNVP-LPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRNPGRDSVVLG 179
+PN+P P +N LFV+ LP T + +F + G+KEVR++ + PG +
Sbjct: 165 KPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAK---PG-----IA 224
Query: 180 FVDFVSPAHAATAMDALQG 198
FV+F + AM LQG
Sbjct: 225 FVEFADEMQSTVAMQGLQG 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141031.1 | 7.0e-123 | 85.19 | RNA-binding protein 2-like isoform X1 [Momordica charantia] | [more] |
XP_038897625.1 | 3.0e-110 | 78.02 | RNA-binding protein 2-like isoform X1 [Benincasa hispida] | [more] |
XP_004146235.1 | 4.4e-109 | 76.56 | RNA-binding protein 2 isoform X2 [Cucumis sativus] >KGN57648.1 hypothetical prot... | [more] |
XP_008455996.1 | 7.5e-109 | 76.92 | PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo] | [more] |
XP_022923072.1 | 2.2e-108 | 76.64 | RNA-binding protein 2-like isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
G7ID19 | 1.3e-42 | 39.60 | RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1 | [more] |
Q8H0P8 | 2.0e-40 | 38.83 | RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1 | [more] |
A1A6K6 | 1.4e-36 | 41.20 | Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE... | [more] |
F4HWF9 | 5.5e-30 | 38.74 | Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE... | [more] |
Q6JB11 | 8.8e-28 | 57.80 | Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CHS7 | 3.4e-123 | 85.19 | RNA-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
A0A0A0L796 | 2.1e-109 | 76.56 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238140 PE=4 SV... | [more] |
A0A1S3C3F7 | 3.6e-109 | 76.92 | RNA-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496055 PE... | [more] |
A0A6J1E554 | 1.1e-108 | 76.64 | RNA-binding protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430... | [more] |
A0A6J1J2D2 | 1.4e-108 | 76.64 | RNA-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148278... | [more] |