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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GGATCATACGGGGGTGGCATTGTGCATGGGCTCGCATCTGCAGGGCTTTTCACCAATGATTCCATCATGAATTTTCGAGTTAACCCTTCAGCTGGACAAGCCATTGCCTCCGAACATAGCTCGGTCGCACCTCGCGGTATCATTGGCTTGAAAGTTAGAAGTTTAGAATATTCACTTAGAAGA mRNA sequence GGATCATACGGGGGTGGCATTGTGCATGGGCTCGCATCTGCAGGGCTTTTCACCAATGATTCCATCATGAATTTTCGAGTTAACCCTTCAGCTGGACAAGCCATTGCCTCCGAACATAGCTCGGTCGCACCTCGCGGTATCATTGGCTTGAAAGTTAGAAGTTTAGAATATTCACTTAGAAGA Coding sequence (CDS) GGATCATACGGGGGTGGCATTGTGCATGGGCTCGCATCTGCAGGGCTTTTCACCAATGATTCCATCATGAATTTTCGAGTTAACCCTTCAGCTGGACAAGCCATTGCCTCCGAACATAGCTCGGTCGCACCTCGCGGTATCATTGGCTTGAAAGTTAGAAGTTTAGAATATTCACTTAGAAGA Protein sequence GSYGGGIVHGLASAGLFTNDSIMNFRVNPSAGQAIASEHSSVAPRGIIGLKVRSLEYSLRR
Homology
BLAST of MS000405 vs. NCBI nr
Match: KAG5616964.1 (hypothetical protein H5410_016788 [Solanum commersonii]) HSP 1 Score: 67.8 bits (164), Expect = 3.7e-08 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 1 GSYGGGIVHGLASAGLFTNDSIMNFRVNPSAGQAIASEHSSVAPRGIIGLKVRSLEYSLR 60 G GGG++ G+AS G T DS MNF VNPSAG AIASE SS A RG +GL SL YSL+ Sbjct: 7 GPNGGGMLQGIASEGPSTIDSNMNFFVNPSAGHAIASEQSSTAFRGTVGLYFNSLAYSLK 66
Query: 61 R 62 R Sbjct: 67 R 67
BLAST of MS000405 vs. ExPASy TrEMBL
Match: A0A3Q7FHF5 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 4.0e-08 Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 1 GSYGGGIVHGLASAGLFTNDSIMNFRVNPSAGQAIASEHSSVAPRGIIGLKVRSLEYSLR 60 G YGGG++ G+AS G T DS MNF VNPSA AIASE SS A RG +GL S YSL+ Sbjct: 7 GPYGGGMLQGVASEGPSTIDSNMNFFVNPSAEHAIASEQSSTALRGTVGLYFNSFAYSLK 66
Query: 61 R 62 R Sbjct: 67 R 67
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG5616964.1 | 3.7e-08 | 62.30 | hypothetical protein H5410_016788 [Solanum commersonii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A3Q7FHF5 | 4.0e-08 | 60.66 | Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS000405.1 | MS000405.1 | mRNA |
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