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MS000403 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAGCTGAACGAAAGATAGCTTCTACTGAAGTATGGGAGAGTTCAAAGCAAGCTGTTTCGGAAGCTAAAGTCAAGAAGATTGAGGTTTTTTTTTCTTTTTTCTTTTTACGGGTGTGCTTTAATTTTCATTTGATAATAAGTTTTAAAAACTCTAAAATAAAATTCATATGGGAAACTAAAGGCTGAAATGGAGAAGATGAAGCTGAAGGAGATTGAGAAGGTTAAAAACAAAGAGGCAGAGGCACATATAACAGCAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAAGCATCAAATACAGAAAGTTGAGGAGAAAGCTGCTAAGCATCGCTCTACCAATACAGTTCCATCCAAGTGCTTTGGTATTTTC AGAGCTGAACGAAAGATAGCTTCTACTGAAGTATGGGAGAGTTCAAAGCAAGCTGTTTCGGAAGCTAAAGTCAAGAAGATTGAGGCTGAAATGGAGAAGATGAAGCTGAAGGAGATTGAGAAGGTTAAAAACAAAGAGGCAGAGGCACATATAACAGCAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAAGCATCAAATACAGAAAGTTGAGGAGAAAGCTGCTAAGCATCGCTCTACCAATACAGTTCCATCCAAGTGCTTTGGTATTTTC AGAGCTGAACGAAAGATAGCTTCTACTGAAGTATGGGAGAGTTCAAAGCAAGCTGTTTCGGAAGCTAAAGTCAAGAAGATTGAGGCTGAAATGGAGAAGATGAAGCTGAAGGAGATTGAGAAGGTTAAAAACAAAGAGGCAGAGGCACATATAACAGCAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAAGCATCAAATACAGAAAGTTGAGGAGAAAGCTGCTAAGCATCGCTCTACCAATACAGTTCCATCCAAGTGCTTTGGTATTTTC RAERKIASTEVWESSKQAVSEAKVKKIEAEMEKMKLKEIEKVKNKEAEAHITAESKKANIEVERKHQIQKVEEKAAKHRSTNTVPSKCFGIF Homology
BLAST of MS000403 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 5.1e-17 Identity = 55/91 (60.44%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of MS000403 vs. NCBI nr
Match: XP_030533547.1 (remorin-like [Rhodamnia argentea] >XP_030533548.1 remorin-like [Rhodamnia argentea] >XP_030533549.1 remorin-like [Rhodamnia argentea]) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11 Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. NCBI nr
Match: XP_022774153.1 (remorin-like [Durio zibethinus]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. NCBI nr
Match: XP_022867512.1 (remorin-like [Olea europaea var. sylvestris] >CAA2997354.1 remorin-like [Olea europaea subsp. europaea]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. NCBI nr
Match: CAA2997353.1 (remorin-like [Olea europaea subsp. europaea]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.9e-13 Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MS000403 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.1e-12 Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of MS000403 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.7e-12 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of MS000403 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.7e-11 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of MS000403 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.5e-17 Identity = 55/91 (60.44%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of MS000403 vs. ExPASy TrEMBL
Match: A0A6P6BAM8 (remorin-like OS=Durio zibethinus OX=66656 GN=LOC111316475 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. ExPASy TrEMBL
Match: A0A6P5YE64 (remorin-like OS=Durio zibethinus OX=66656 GN=LOC111291041 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0
BLAST of MS000403 vs. ExPASy TrEMBL
Match: A0A7N2N9V0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of MS000403 vs. ExPASy TrEMBL
Match: A0A7J7CE28 (Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11 Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MS000403 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14 Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MS000403 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14 Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of MS000403 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.6e-13 Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of MS000403 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 71.2 bits (173), Expect = 4.8e-13 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of MS000403 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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