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MS000401 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGTTTTTTTTTTTCTTTTTGTGGGTGTGCTTTAATTTTCATTTTATATATCATAAATTTTGAAAAAAAAAATTCATATAGGAAATTAAAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAAGATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGAAGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC LMRAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD Homology
BLAST of MS000401 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 53/96 (55.21%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of MS000401 vs. NCBI nr
Match: KAA0033641.1 (remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09 Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS000401 vs. NCBI nr
Match: KAF5732350.1 (Remorin family protein [Tripterygium wilfordii]) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08 Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of MS000401 vs. NCBI nr
Match: XP_022867512.1 (remorin-like [Olea europaea var. sylvestris] >CAA2997354.1 remorin-like [Olea europaea subsp. europaea]) HSP 1 Score: 68.2 bits (165), Expect = 4.6e-08 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of MS000401 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 4.6e-08 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of MS000401 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of MS000401 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.8e-08 Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of MS000401 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.2e-08 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MS000401 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.9e-07 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MS000401 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15 Identity = 53/96 (55.21%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of MS000401 vs. ExPASy TrEMBL
Match: A0A5D3DHT0 (Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09 Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS000401 vs. ExPASy TrEMBL
Match: A0A7J7CE28 (Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 7.7e-09 Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of MS000401 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of MS000401 vs. ExPASy TrEMBL
Match: A0A7J7CAJ4 (Remorin OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00758 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.9e-08 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of MS000401 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 0
BLAST of MS000401 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09 Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of MS000401 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09 Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of MS000401 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of MS000401 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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