Homology
BLAST of MS000397 vs. NCBI nr
Match:
XP_022140848.1 (pentatricopeptide repeat-containing protein At3g29230-like [Momordica charantia])
HSP 1 Score: 828.6 bits (2139), Expect = 2.5e-236
Identity = 417/484 (86.16%), Postives = 419/484 (86.57%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH
Sbjct: 70 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI
Sbjct: 130 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVTGGKVSDARKVFDEMCVRTVEVCNRM 189
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VREVVKARELFERIPENNVVSWT
Sbjct: 190 MAGYTSAGDVNNARQLFDNMEDRDIITWNTMISGYVKVREVVKARELFERIPENNVVSWT 249
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEG+TP
Sbjct: 250 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGVTP 309
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI
Sbjct: 310 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 369
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE
Sbjct: 370 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 429
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQSIFDNMEKE GISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC
Sbjct: 430 GQSIFDNMEKECGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 489
BLAST of MS000397 vs. NCBI nr
Match:
KAG6574174.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 730.7 bits (1885), Expect = 7.1e-207
Identity = 361/484 (74.59%), Postives = 390/484 (80.58%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAM+RGYAFNGP EK VSLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 18 EVQFWNAMVRGYAFNGPVEKSVSLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 77
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CR++KTGFS ++SVS+ALLNLYLK+ EF GPG+
Sbjct: 78 CRVIKTGFSLNYSVSDALLNLYLKISEFSGPGLVSDGKVWDARKLFDEMRDRTIEVWNRM 137
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VR+V KARELFER+PE N+VSWT
Sbjct: 138 ILVYMRTGDVYGARQLFDSMEDRDIVSWNTMISGYVKVRDVAKARELFERMPEKNIVSWT 197
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+FQEA +LFI+M SEGITP
Sbjct: 198 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITP 257
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVIAATALIEMYAKCGDINRAF +FI
Sbjct: 258 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALIEMYAKCGDINRAFTIFI 317
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG KDVFCWNVMLKSLALHGK+ DAIKL SLMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 318 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLSLMQKEGLKPNDFTFLGALFACSHGGMTEE 377
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPDVAIWGALLGGC
Sbjct: 378 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 437
BLAST of MS000397 vs. NCBI nr
Match:
KAG7013228.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 729.2 bits (1881), Expect = 2.1e-206
Identity = 360/484 (74.38%), Postives = 390/484 (80.58%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAM+RGYAFNGP EK VSLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 70 EVQFWNAMVRGYAFNGPVEKSVSLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CR++KTGFS ++SVS+ALLNLYLK+ EF GPG+
Sbjct: 130 CRVIKTGFSLNYSVSDALLNLYLKISEFSGPGLVSDGKVWDARKLFDEMRDRTIEVWNRM 189
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VR+V ARELFER+PE N+VSWT
Sbjct: 190 ILVYMRTGDVYGARQLFDSMEDRDIVSWNTMISGYVKVRDVATARELFERMPEKNIVSWT 249
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+FQEA +LFI+M SEGITP
Sbjct: 250 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITP 309
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVIAATALIEMYAKCGDINRAF +FI
Sbjct: 310 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALIEMYAKCGDINRAFTIFI 369
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG+KDVFCWNVMLKSLALHGK+ DAIKL SLMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 370 KIGMKDVFCWNVMLKSLALHGKAQDAIKLLSLMQKEGLKPNDFTFLGALFACSHGGMTEE 429
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPDVAIWGALLGGC
Sbjct: 430 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 489
BLAST of MS000397 vs. NCBI nr
Match:
XP_023541409.1 (pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 723.4 bits (1866), Expect = 1.1e-204
Identity = 357/484 (73.76%), Postives = 388/484 (80.17%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAM+RGYAFNGP EK VSLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 71 EVQFWNAMVRGYAFNGPVEKSVSLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 130
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRI+KTGFS ++SVS+ALLNLYLK+ EF GPG
Sbjct: 131 CRIIKTGFSLNYSVSDALLNLYLKISEFSGPGAVSDGKVWDARKLFDEMRDRTIEVWNRM 190
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VR++ KARELFE++PE N+VSWT
Sbjct: 191 ILVYMRTGDVYGARQLFDSIEDRDVVSWNTMISGYVKVRDIAKARELFEQMPEKNIVSWT 250
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ +FQEA +LFI+M SEGITP
Sbjct: 251 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHRDFQEARNLFIQMLSEGITP 310
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVI+ATAL+EMYAKCGDINRAF +FI
Sbjct: 311 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVISATALVEMYAKCGDINRAFTIFI 370
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG KDVFCWNVMLKSLALHGK+ DAIKL SLMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 371 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLSLMQKEGLKPNDFTFLGALFACSHGGMTEE 430
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPDVAIWGALLGGC
Sbjct: 431 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 490
BLAST of MS000397 vs. NCBI nr
Match:
XP_022944806.1 (pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita moschata])
HSP 1 Score: 723.4 bits (1866), Expect = 1.1e-204
Identity = 359/484 (74.17%), Postives = 386/484 (79.75%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAMIRGYAFNGP EK SLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 70 EVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRI+KTGFS ++SVS+ALLNLYLK+ E GPG+
Sbjct: 130 CRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDARKLFDEMRDRTIEVWNRM 189
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VR+V KARELFER+PE N+VSWT
Sbjct: 190 ILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAKARELFERMPEKNIVSWT 249
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+FQEA +LFI+M SEGITP
Sbjct: 250 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITP 309
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVIAATALIEMYAKCGDINRAF +FI
Sbjct: 310 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALIEMYAKCGDINRAFTIFI 369
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG KDVFCWNVMLKSLALHGK+ DAIKL LMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 370 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGMTEE 429
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPDVAIWGALLGGC
Sbjct: 430 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 489
BLAST of MS000397 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 4.9e-86
Identity = 161/418 (38.52%), Postives = 240/418 (57.42%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHN-FTYPFVLNSCTDLGRFRDGENVHCRI 64
WN MIRG++ + E+ + LY +L PHN +T+P +L +C++L F + +H +I
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHAQI 142
Query: 65 LKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIGVYA 124
K G+ + N+L+N Y F A LF+RIPE + VSW +I Y
Sbjct: 143 TKLGYENDVYAVNSLINSYAVTGNFK---------LAHLLFDRIPEPDDVSWNSVIKGYV 202
Query: 125 KAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVS 184
KAG + A F KM ++N +SW +M+S YVQ +EA+ LF EM++ + PD + +
Sbjct: 203 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 262
Query: 185 VLSACSHLGDLEFGKWIH-YLIEDFSQLGVIAATALIEMYAKCGDINRAFILFIKIGIKD 244
LSAC+ LG LE GKWIH YL + ++ + LI+MYAKCG++ A +F I K
Sbjct: 263 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 322
Query: 245 VFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSIFD 304
V W ++ A HG +AI F MQK G+KPN TF L ACS+ G+VEEG+ IF
Sbjct: 323 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 382
Query: 305 NMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRSDF 364
+ME++Y + PTIEH+GC++DLL R G L+EA + + +MP +P+ IWGALL C++ +
Sbjct: 383 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 442
Query: 365 RRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQSSV 421
EI E + GG + +N++A + W +A R M+E+ + K G S++
Sbjct: 443 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
BLAST of MS000397 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 1.2e-84
Identity = 163/423 (38.53%), Postives = 248/423 (58.63%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
++ + A I + NG ++ LY +LL + P+ FT+ +L SC+ + G+ +H
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIH 153
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIG 120
+LK G V+ L+++Y K +VV A+++F+R+PE ++VS T MI
Sbjct: 154 THVLKFGLGIDPYVATGLVDVYAK---------GGDVVSAQKVFDRMPERSLVSSTAMIT 213
Query: 121 VYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEG-ITPDGY 180
YAK G++ AR F+ M +R++VSWN M+ Y Q G +A+ LF ++ +EG PD
Sbjct: 214 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 273
Query: 181 TFVSVLSACSHLGDLEFGKWIHYLIEDFS-QLGVIAATALIEMYAKCGDINRAFILFIKI 240
T V+ LSACS +G LE G+WIH ++ +L V T LI+MY+KCG + A ++F
Sbjct: 274 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 333
Query: 241 GIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEG 300
KD+ WN M+ A+HG S DA++LF+ MQ GL+P D TF+G L AC+H G+V EG
Sbjct: 334 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 393
Query: 301 QSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCK 360
IF++M +EYGI P IEH+GC++ LL R G+L+ A + + M + D +W ++LG CK
Sbjct: 394 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 453
Query: 361 LRSDFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQ 420
L DF EI E L GI+ LSN+YAS+ + R M+E+ I+K+ G
Sbjct: 454 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 503
BLAST of MS000397 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 313.9 bits (803), Expect = 2.7e-84
Identity = 170/478 (35.56%), Postives = 264/478 (55.23%), Query Frame = 0
Query: 2 IQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVHC 61
+ N++IR +A N + +++E+ + GL NFTYPF+L +C+ + +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 62 RILKTGFSSSFSVSNALLNLYLK------------------------------------- 121
I K G SS V NAL++ Y +
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 122 ------LPEFPGPGIV------------REVVKARELFERIPENNVVSWTLMIGVYAKAG 181
E P ++ RE+ KA ELFE++PE N VSW+ M+ Y+KAG
Sbjct: 202 RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAG 261
Query: 182 DLITARMFFNKM--PQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVSV 241
D+ AR+ F+KM P +NVV+W +++ Y ++G +EA L +M + G+ D +S+
Sbjct: 262 DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 242 LSACSHLGDLEFGKWIHYLIEDFSQLG--VIAATALIEMYAKCGDINRAFILFIKIGIKD 301
L+AC+ G L G IH +++ S LG AL++MYAKCG++ +AF +F I KD
Sbjct: 322 LAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 381
Query: 302 VFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSIFD 361
+ WN ML L +HG +AI+LFS M++EG++P+ TF+ L +C+H G+++EG F
Sbjct: 382 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 441
Query: 362 NMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRSDF 421
+MEK Y + P +EH+GC++DLL R GRL+EA+++V MP EP+V IWGALLG C++ ++
Sbjct: 442 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 501
BLAST of MS000397 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 313.2 bits (801), Expect = 4.6e-84
Identity = 160/420 (38.10%), Postives = 242/420 (57.62%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSLYTELLQRGLK-PHNFTYPFVLNSCTDLGRFRDGENVHCRI 64
+N++IR Y N + +Y +LL++ + P FT+PF+ SC LG G+ VH +
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 65 LKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIGVYA 124
K G NAL+++Y+K ++V A ++F+ + E +V+SW ++ YA
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFD---------DLVDAHKVFDEMYERDVISWNSLLSGYA 195
Query: 125 KAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVS 184
+ G + A+ F+ M + +VSW +M+S Y G + EA+D F EM+ GI PD + +S
Sbjct: 196 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 255
Query: 185 VLSACSHLGDLEFGKWIHYLIED---FSQLGVIAATALIEMYAKCGDINRAFILFIKIGI 244
VL +C+ LG LE GKWIH E Q GV ALIEMY+KCG I++A LF ++
Sbjct: 256 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGV--CNALIEMYSKCGVISQAIQLFGQMEG 315
Query: 245 KDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSI 304
KDV W+ M+ A HG +H AI+ F+ MQ+ +KPN TFLG L ACSH GM +EG
Sbjct: 316 KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRY 375
Query: 305 FDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRS 364
FD M ++Y I P IEH+GC+ID+L+R G+LE A+++ MP +PD IWG+LL C+
Sbjct: 376 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 435
Query: 365 DFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQSSV 421
+ A ++ +L + G + L+N+YA + W + R+ + EN+ K G S +
Sbjct: 436 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
BLAST of MS000397 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 3.0e-83
Identity = 158/434 (36.41%), Postives = 251/434 (57.83%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSL---YTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVHC 64
WN +IRG++ + + +++ Y + ++P+ FT+P VL +C G+ ++G+ +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 65 RILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELF--------------ERI 124
LK GF V + L+ +Y+ G +++ AR LF R
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMC------GFMKD---ARVLFYKNIIEKDMVVMTDRRK 212
Query: 125 PENNVVSWTLMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFI 184
+ +V W +MI Y + GD ARM F+KM QR+VVSWN+M+S Y G F++AV++F
Sbjct: 213 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 272
Query: 185 EMRSEGITPDGYTFVSVLSACSHLGDLEFGKWIHYLIEDFS-QLGVIAATALIEMYAKCG 244
EM+ I P+ T VSVL A S LG LE G+W+H ED ++ + +ALI+MY+KCG
Sbjct: 273 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 332
Query: 245 DINRAFILFIKIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALF 304
I +A +F ++ ++V W+ M+ A+HG++ DAI F M++ G++P+D ++ L
Sbjct: 333 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 392
Query: 305 ACSHGGMVEEGQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDV 364
ACSHGG+VEEG+ F M G+ P IEH+GC++DLL R+G L+EA + + MP +PD
Sbjct: 393 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 452
Query: 365 AIWGALLGGCKLRSDFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKM 421
IW ALLG C+++ + + + ++ G + +LSNMYAS +W E R +M
Sbjct: 453 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 512
BLAST of MS000397 vs. ExPASy TrEMBL
Match:
A0A6J1CIY5 (pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charantia OX=3673 GN=LOC111011418 PE=4 SV=1)
HSP 1 Score: 828.6 bits (2139), Expect = 1.2e-236
Identity = 417/484 (86.16%), Postives = 419/484 (86.57%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH
Sbjct: 70 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI
Sbjct: 130 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVTGGKVSDARKVFDEMCVRTVEVCNRM 189
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VREVVKARELFERIPENNVVSWT
Sbjct: 190 MAGYTSAGDVNNARQLFDNMEDRDIITWNTMISGYVKVREVVKARELFERIPENNVVSWT 249
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEG+TP
Sbjct: 250 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGVTP 309
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI
Sbjct: 310 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 369
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE
Sbjct: 370 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 429
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQSIFDNMEKE GISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC
Sbjct: 430 GQSIFDNMEKECGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 489
BLAST of MS000397 vs. ExPASy TrEMBL
Match:
A0A6J1FZ38 (pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita moschata OX=3662 GN=LOC111449234 PE=4 SV=1)
HSP 1 Score: 723.4 bits (1866), Expect = 5.5e-205
Identity = 359/484 (74.17%), Postives = 386/484 (79.75%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAMIRGYAFNGP EK SLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 70 EVQFWNAMIRGYAFNGPVEKSASLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRI+KTGFS ++SVS+ALLNLYLK+ E GPG+
Sbjct: 130 CRIIKTGFSLNYSVSDALLNLYLKISELSGPGVVSDGKVWDARKLFDEMRDRTIEVWNRM 189
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
VR+V KARELFER+PE N+VSWT
Sbjct: 190 ILVYMRTGDVYGARQLFDSMEDRDVVSWNTMISGYVKVRDVAKARELFERMPEKNIVSWT 249
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+FQEA +LFI+M SEGITP
Sbjct: 250 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITP 309
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+DFSQLGVIAATALIEMYAKCGDINRAF +FI
Sbjct: 310 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDFSQLGVIAATALIEMYAKCGDINRAFTIFI 369
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG KDVFCWNVMLKSLALHGK+ DAIKL LMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 370 KIGTKDVFCWNVMLKSLALHGKAQDAIKLLYLMQKEGLKPNDFTFLGALFACSHGGMTEE 429
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPDVAIWGALLGGC
Sbjct: 430 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDQMPFEPDVAIWGALLGGC 489
BLAST of MS000397 vs. ExPASy TrEMBL
Match:
A0A6J1HXE5 (pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita maxima OX=3661 GN=LOC111467521 PE=4 SV=1)
HSP 1 Score: 722.6 bits (1864), Expect = 9.3e-205
Identity = 357/484 (73.76%), Postives = 389/484 (80.37%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
E+QFWNAM+RGYAFNGP EK VSLY ELLQRGLKPHNFTYP+VLNSC DLG F DG+ VH
Sbjct: 71 EVQFWNAMVRGYAFNGPVEKSVSLYGELLQRGLKPHNFTYPYVLNSCADLGWFWDGKKVH 130
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGI--------------------------- 120
CRI+KTGFS + SVS+ALLNLYLK+ EF GPG+
Sbjct: 131 CRIIKTGFSLNCSVSDALLNLYLKISEFSGPGVVSDGKVWDARKLFDEMRDRTIEVWNRM 190
Query: 121 -------------------------------------VREVVKARELFERIPENNVVSWT 180
V++VVKARELFER+PE N+VSWT
Sbjct: 191 ILVYMRTGDVYGARQLFDSMEDRDIVSWNTMISGYVKVQDVVKARELFERMPEKNIVSWT 250
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MIG YAKAGD+ITARMFFNKMPQRNVVSWNSMVSSYVQ G+FQEA +LFI+M SEGITP
Sbjct: 251 SMIGAYAKAGDIITARMFFNKMPQRNVVSWNSMVSSYVQHGDFQEARNLFIQMLSEGITP 310
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
D YTFVSVLSACSHLGDLEFGKWIHYLI+D SQLGVIAATALIEMYAKCGDINRAF +FI
Sbjct: 311 DRYTFVSVLSACSHLGDLEFGKWIHYLIDDVSQLGVIAATALIEMYAKCGDINRAFTIFI 370
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG+KDVFCWNVMLKSLALHGK+ DAIKL SLMQKEGLKPNDFTFLGALFACSHGGM EE
Sbjct: 371 KIGMKDVFCWNVMLKSLALHGKAQDAIKLLSLMQKEGLKPNDFTFLGALFACSHGGMTEE 430
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ IFDNM+KE+GISPTIEH+GCVIDLLSRNGRLEEAL++VD+MPFEPD+AIWGALLGGC
Sbjct: 431 GQIIFDNMQKEHGISPTIEHYGCVIDLLSRNGRLEEALRIVDRMPFEPDIAIWGALLGGC 490
BLAST of MS000397 vs. ExPASy TrEMBL
Match:
A0A5D3DH88 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00130 PE=4 SV=1)
HSP 1 Score: 679.5 bits (1752), Expect = 9.1e-192
Identity = 343/484 (70.87%), Postives = 374/484 (77.27%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
EIQFWNAMIRGYAFNGPA + +SLY +LLQRGLKPH+FTYPFVL SC DLG F DG+ VH
Sbjct: 18 EIQFWNAMIRGYAFNGPAHQSLSLYGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVH 77
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGP----------------------------- 120
CRILKTGFS + SVS+AL NLY+ +F GP
Sbjct: 78 CRILKTGFSLNSSVSDALFNLYVNFSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRM 137
Query: 121 ---------------------------------GIVR--EVVKARELFERIPENNVVSWT 180
G ++ EV+KARELFE++PE NVVSWT
Sbjct: 138 ILRYTSAGDVSGAQKLFDTMEDRDTVSWNTMLSGYIKVGEVMKARELFEKMPEKNVVSWT 197
Query: 181 LMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITP 240
MI YAKAGDL TARMFFNKMPQRNVVSWNSM+SSYVQ G+FQEA+DLFI+M SEGI+P
Sbjct: 198 SMISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFIQMLSEGISP 257
Query: 241 DGYTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFI 300
DGYTFVSV SACSHLGDL FG IHYLI+DFSQLGVIAATALIEMYAKCGDINRAF LFI
Sbjct: 258 DGYTFVSVFSACSHLGDLTFGTRIHYLIDDFSQLGVIAATALIEMYAKCGDINRAFNLFI 317
Query: 301 KIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEE 360
KIG KDVF WNVMLKSLALHG++ DA+KLFSLMQK+GLKPNDFTFLGALFACSHGGMVEE
Sbjct: 318 KIGKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGALFACSHGGMVEE 377
Query: 361 GQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGC 420
GQ+IFD MEKEY I P IEHFGC++DLLSRNGRLEEAL +VDKMPFE DVAIWGALLGGC
Sbjct: 378 GQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGC 437
BLAST of MS000397 vs. ExPASy TrEMBL
Match:
A0A0A0L9R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182030 PE=4 SV=1)
HSP 1 Score: 624.0 bits (1608), Expect = 4.5e-175
Identity = 308/422 (72.99%), Postives = 346/422 (81.99%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
EIQFWNAMIRGYAFNGPA + VSLY +LLQRGLKPH+FTYPFVL SC DLG F DG+ VH
Sbjct: 70 EIQFWNAMIRGYAFNGPAHQSVSLYGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVH 129
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVRE--VVKARELFERIPENNVVSWTLM 120
CRILKTGFS + SVS+AL +LY+ +F GP + AR++F+ + +V W M
Sbjct: 130 CRILKTGFSLNSSVSDALFHLYVNFSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRM 189
Query: 121 IGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDG 180
I Y GD+ A+ FN M R+ VSWN+M+S Y++ G +EA+DLF +M SEGITPDG
Sbjct: 190 ILRYTSTGDVSGAQKLFNTMEDRDTVSWNTMISGYIKVG--EEALDLFNQMLSEGITPDG 249
Query: 181 YTFVSVLSACSHLGDLEFGKWIHYLIEDFSQLGVIAATALIEMYAKCGDINRAFILFIKI 240
YTFVSV SACSHLG+L G IHY I+DFSQLGVIAATALIEMYAKCGDINRAF LFIKI
Sbjct: 250 YTFVSVFSACSHLGNLMLGTKIHYAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKI 309
Query: 241 GIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQ 300
G KDVF WNVMLKSLALHG++ DA+KLFSLMQK+GLKPNDFTFLGALFACSHGGMVEEGQ
Sbjct: 310 GKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGALFACSHGGMVEEGQ 369
Query: 301 SIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKL 360
+IFD MEKEY I P IEHFGC++DLLSRNGRLEEAL +VDKMPFE DVAIWGALLGGCKL
Sbjct: 370 TIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGCKL 429
Query: 361 RSDFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQS 420
R DF+RAGEIVERA KLRS EGGIH S SNMYAS+E W EA+ AREKME ENILKKTGQS
Sbjct: 430 RGDFKRAGEIVERARKLRSKEGGIHVSFSNMYASVEQWAEAVNAREKMENENILKKTGQS 489
BLAST of MS000397 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 319.7 bits (818), Expect = 3.5e-87
Identity = 161/418 (38.52%), Postives = 240/418 (57.42%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHN-FTYPFVLNSCTDLGRFRDGENVHCRI 64
WN MIRG++ + E+ + LY +L PHN +T+P +L +C++L F + +H +I
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIHAQI 142
Query: 65 LKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIGVYA 124
K G+ + N+L+N Y F A LF+RIPE + VSW +I Y
Sbjct: 143 TKLGYENDVYAVNSLINSYAVTGNFK---------LAHLLFDRIPEPDDVSWNSVIKGYV 202
Query: 125 KAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVS 184
KAG + A F KM ++N +SW +M+S YVQ +EA+ LF EM++ + PD + +
Sbjct: 203 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 262
Query: 185 VLSACSHLGDLEFGKWIH-YLIEDFSQLGVIAATALIEMYAKCGDINRAFILFIKIGIKD 244
LSAC+ LG LE GKWIH YL + ++ + LI+MYAKCG++ A +F I K
Sbjct: 263 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 322
Query: 245 VFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSIFD 304
V W ++ A HG +AI F MQK G+KPN TF L ACS+ G+VEEG+ IF
Sbjct: 323 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 382
Query: 305 NMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRSDF 364
+ME++Y + PTIEH+GC++DLL R G L+EA + + +MP +P+ IWGALL C++ +
Sbjct: 383 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 442
Query: 365 RRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQSSV 421
EI E + GG + +N++A + W +A R M+E+ + K G S++
Sbjct: 443 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
BLAST of MS000397 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 315.1 bits (806), Expect = 8.6e-86
Identity = 163/423 (38.53%), Postives = 248/423 (58.63%), Query Frame = 0
Query: 1 EIQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVH 60
++ + A I + NG ++ LY +LL + P+ FT+ +L SC+ + G+ +H
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIH 153
Query: 61 CRILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIG 120
+LK G V+ L+++Y K +VV A+++F+R+PE ++VS T MI
Sbjct: 154 THVLKFGLGIDPYVATGLVDVYAK---------GGDVVSAQKVFDRMPERSLVSSTAMIT 213
Query: 121 VYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEG-ITPDGY 180
YAK G++ AR F+ M +R++VSWN M+ Y Q G +A+ LF ++ +EG PD
Sbjct: 214 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 273
Query: 181 TFVSVLSACSHLGDLEFGKWIHYLIEDFS-QLGVIAATALIEMYAKCGDINRAFILFIKI 240
T V+ LSACS +G LE G+WIH ++ +L V T LI+MY+KCG + A ++F
Sbjct: 274 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 333
Query: 241 GIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQK-EGLKPNDFTFLGALFACSHGGMVEEG 300
KD+ WN M+ A+HG S DA++LF+ MQ GL+P D TF+G L AC+H G+V EG
Sbjct: 334 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 393
Query: 301 QSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCK 360
IF++M +EYGI P IEH+GC++ LL R G+L+ A + + M + D +W ++LG CK
Sbjct: 394 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 453
Query: 361 LRSDFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQ 420
L DF EI E L GI+ LSN+YAS+ + R M+E+ I+K+ G
Sbjct: 454 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 503
BLAST of MS000397 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 313.9 bits (803), Expect = 1.9e-85
Identity = 170/478 (35.56%), Postives = 264/478 (55.23%), Query Frame = 0
Query: 2 IQFWNAMIRGYAFNGPAEKCVSLYTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVHC 61
+ N++IR +A N + +++E+ + GL NFTYPF+L +C+ + +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 62 RILKTGFSSSFSVSNALLNLYLK------------------------------------- 121
I K G SS V NAL++ Y +
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 122 ------LPEFPGPGIV------------REVVKARELFERIPENNVVSWTLMIGVYAKAG 181
E P ++ RE+ KA ELFE++PE N VSW+ M+ Y+KAG
Sbjct: 202 RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAG 261
Query: 182 DLITARMFFNKM--PQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVSV 241
D+ AR+ F+KM P +NVV+W +++ Y ++G +EA L +M + G+ D +S+
Sbjct: 262 DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 242 LSACSHLGDLEFGKWIHYLIEDFSQLG--VIAATALIEMYAKCGDINRAFILFIKIGIKD 301
L+AC+ G L G IH +++ S LG AL++MYAKCG++ +AF +F I KD
Sbjct: 322 LAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 381
Query: 302 VFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSIFD 361
+ WN ML L +HG +AI+LFS M++EG++P+ TF+ L +C+H G+++EG F
Sbjct: 382 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 441
Query: 362 NMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRSDF 421
+MEK Y + P +EH+GC++DLL R GRL+EA+++V MP EP+V IWGALLG C++ ++
Sbjct: 442 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 501
BLAST of MS000397 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 313.2 bits (801), Expect = 3.3e-85
Identity = 160/420 (38.10%), Postives = 242/420 (57.62%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSLYTELLQRGLK-PHNFTYPFVLNSCTDLGRFRDGENVHCRI 64
+N++IR Y N + +Y +LL++ + P FT+PF+ SC LG G+ VH +
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 65 LKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELFERIPENNVVSWTLMIGVYA 124
K G NAL+++Y+K ++V A ++F+ + E +V+SW ++ YA
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFD---------DLVDAHKVFDEMYERDVISWNSLLSGYA 195
Query: 125 KAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFIEMRSEGITPDGYTFVS 184
+ G + A+ F+ M + +VSW +M+S Y G + EA+D F EM+ GI PD + +S
Sbjct: 196 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 255
Query: 185 VLSACSHLGDLEFGKWIHYLIED---FSQLGVIAATALIEMYAKCGDINRAFILFIKIGI 244
VL +C+ LG LE GKWIH E Q GV ALIEMY+KCG I++A LF ++
Sbjct: 256 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGV--CNALIEMYSKCGVISQAIQLFGQMEG 315
Query: 245 KDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALFACSHGGMVEEGQSI 304
KDV W+ M+ A HG +H AI+ F+ MQ+ +KPN TFLG L ACSH GM +EG
Sbjct: 316 KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRY 375
Query: 305 FDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDVAIWGALLGGCKLRS 364
FD M ++Y I P IEH+GC+ID+L+R G+LE A+++ MP +PD IWG+LL C+
Sbjct: 376 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 435
Query: 365 DFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKMEEENILKKTGQSSV 421
+ A ++ +L + G + L+N+YA + W + R+ + EN+ K G S +
Sbjct: 436 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
BLAST of MS000397 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 310.5 bits (794), Expect = 2.1e-84
Identity = 158/434 (36.41%), Postives = 251/434 (57.83%), Query Frame = 0
Query: 5 WNAMIRGYAFNGPAEKCVSL---YTELLQRGLKPHNFTYPFVLNSCTDLGRFRDGENVHC 64
WN +IRG++ + + +++ Y + ++P+ FT+P VL +C G+ ++G+ +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 65 RILKTGFSSSFSVSNALLNLYLKLPEFPGPGIVREVVKARELF--------------ERI 124
LK GF V + L+ +Y+ G +++ AR LF R
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMC------GFMKD---ARVLFYKNIIEKDMVVMTDRRK 212
Query: 125 PENNVVSWTLMIGVYAKAGDLITARMFFNKMPQRNVVSWNSMVSSYVQQGNFQEAVDLFI 184
+ +V W +MI Y + GD ARM F+KM QR+VVSWN+M+S Y G F++AV++F
Sbjct: 213 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 272
Query: 185 EMRSEGITPDGYTFVSVLSACSHLGDLEFGKWIHYLIEDFS-QLGVIAATALIEMYAKCG 244
EM+ I P+ T VSVL A S LG LE G+W+H ED ++ + +ALI+MY+KCG
Sbjct: 273 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 332
Query: 245 DINRAFILFIKIGIKDVFCWNVMLKSLALHGKSHDAIKLFSLMQKEGLKPNDFTFLGALF 304
I +A +F ++ ++V W+ M+ A+HG++ DAI F M++ G++P+D ++ L
Sbjct: 333 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 392
Query: 305 ACSHGGMVEEGQSIFDNMEKEYGISPTIEHFGCVIDLLSRNGRLEEALQLVDKMPFEPDV 364
ACSHGG+VEEG+ F M G+ P IEH+GC++DLL R+G L+EA + + MP +PD
Sbjct: 393 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 452
Query: 365 AIWGALLGGCKLRSDFRRAGEIVERASKLRSNEGGIHASLSNMYASIEHWPEALIAREKM 421
IW ALLG C+++ + + + ++ G + +LSNMYAS +W E R +M
Sbjct: 453 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 512
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140848.1 | 2.5e-236 | 86.16 | pentatricopeptide repeat-containing protein At3g29230-like [Momordica charantia] | [more] |
KAG6574174.1 | 7.1e-207 | 74.59 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7013228.1 | 2.1e-206 | 74.38 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023541409.1 | 1.1e-204 | 73.76 | pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita pepo subsp... | [more] |
XP_022944806.1 | 1.1e-204 | 74.17 | pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9FJY7 | 4.9e-86 | 38.52 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 1.2e-84 | 38.53 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Q9LS72 | 2.7e-84 | 35.56 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 4.6e-84 | 38.10 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FI80 | 3.0e-83 | 36.41 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CIY5 | 1.2e-236 | 86.16 | pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charanti... | [more] |
A0A6J1FZ38 | 5.5e-205 | 74.17 | pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita moschata... | [more] |
A0A6J1HXE5 | 9.3e-205 | 73.76 | pentatricopeptide repeat-containing protein At3g29230-like OS=Cucurbita maxima O... | [more] |
A0A5D3DH88 | 9.1e-192 | 70.87 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0L9R7 | 4.5e-175 | 72.99 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182030 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G66520.1 | 3.5e-87 | 38.52 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37380.1 | 8.6e-86 | 38.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 1.9e-85 | 35.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 3.3e-85 | 38.10 | mitochondrial editing factor 21 | [more] |
AT5G48910.1 | 2.1e-84 | 36.41 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |