Homology
BLAST of MS000396 vs. NCBI nr
Match:
XP_022140856.1 (DNA mismatch repair protein MSH3 isoform X1 [Momordica charantia])
HSP 1 Score: 2096.2 bits (5430), Expect = 0.0e+00
Identity = 1102/1184 (93.07%), Postives = 1104/1184 (93.24%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 60
MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS
Sbjct: 9 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 68
Query: 61 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 120
QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP
Sbjct: 69 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 128
Query: 121 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 180
KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT
Sbjct: 129 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 188
Query: 181 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 240
FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG
Sbjct: 189 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 248
Query: 241 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 300
GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR
Sbjct: 249 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 308
Query: 301 SGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGN 360
SGLESMLLSLSPAELLVGDPISKLTEK
Sbjct: 309 SGLESMLLSLSPAELLVGDPISKLTEK--------------------------------- 368
Query: 361 CTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVR 420
LLLGYAGPASNVR
Sbjct: 369 -----------------------------------------------LLLGYAGPASNVR 428
Query: 421 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 480
VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA
Sbjct: 429 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 488
Query: 481 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 540
LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL
Sbjct: 489 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 548
Query: 541 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 600
LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD
Sbjct: 549 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 608
Query: 601 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQLQK 660
SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAV+QAVLFAGKQLQK
Sbjct: 609 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVVQAVLFAGKQLQK 668
Query: 661 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 720
FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII
Sbjct: 669 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 728
Query: 721 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 780
NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP
Sbjct: 729 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 788
Query: 781 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 840
SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV
Sbjct: 789 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 848
Query: 841 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 900
QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM
Sbjct: 849 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 908
Query: 901 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDT 960
NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLD+IYTRMGASDT
Sbjct: 909 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDAIYTRMGASDT 968
Query: 961 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1020
IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL
Sbjct: 969 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1028
Query: 1021 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1080
LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES
Sbjct: 1029 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1088
Query: 1081 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1140
SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA
Sbjct: 1089 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1112
Query: 1141 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR
Sbjct: 1149 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1112
BLAST of MS000396 vs. NCBI nr
Match:
XP_022140857.1 (DNA mismatch repair protein MSH3 isoform X2 [Momordica charantia])
HSP 1 Score: 2096.2 bits (5430), Expect = 0.0e+00
Identity = 1102/1184 (93.07%), Postives = 1104/1184 (93.24%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 60
MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS
Sbjct: 9 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 68
Query: 61 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 120
QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP
Sbjct: 69 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 128
Query: 121 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 180
KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT
Sbjct: 129 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 188
Query: 181 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 240
FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG
Sbjct: 189 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 248
Query: 241 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 300
GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR
Sbjct: 249 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 308
Query: 301 SGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGN 360
SGLESMLLSLSPAELLVGDPISKLTEK
Sbjct: 309 SGLESMLLSLSPAELLVGDPISKLTEK--------------------------------- 368
Query: 361 CTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVR 420
LLLGYAGPASNVR
Sbjct: 369 -----------------------------------------------LLLGYAGPASNVR 428
Query: 421 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 480
VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA
Sbjct: 429 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 488
Query: 481 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 540
LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL
Sbjct: 489 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 548
Query: 541 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 600
LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD
Sbjct: 549 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 608
Query: 601 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQLQK 660
SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAV+QAVLFAGKQLQK
Sbjct: 609 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVVQAVLFAGKQLQK 668
Query: 661 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 720
FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII
Sbjct: 669 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 728
Query: 721 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 780
NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP
Sbjct: 729 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 788
Query: 781 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 840
SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV
Sbjct: 789 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 848
Query: 841 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 900
QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM
Sbjct: 849 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 908
Query: 901 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDT 960
NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLD+IYTRMGASDT
Sbjct: 909 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDAIYTRMGASDT 968
Query: 961 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1020
IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL
Sbjct: 969 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1028
Query: 1021 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1080
LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES
Sbjct: 1029 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1088
Query: 1081 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1140
SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA
Sbjct: 1089 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1112
Query: 1141 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR
Sbjct: 1149 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1112
BLAST of MS000396 vs. NCBI nr
Match:
KAG6576729.1 (DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1764.2 bits (4568), Expect = 0.0e+00
Identity = 952/1194 (79.73%), Postives = 1013/1194 (84.84%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSP----SSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSS 60
MGKQKQQVISRFFAPKPKSP SSSSSS P QPFSPPKISATVTFSPSKRL+SS
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISS 60
Query: 61 ALASQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPP 120
ALASQ TPPKSSKRPKLSPHT NP+ + NPSLHKRFL+KFLEP EN+ + SN NPK P
Sbjct: 61 ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPT 120
Query: 121 GGDPKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTA 180
GGD KYTPLELQVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLD NFMTA
Sbjct: 121 GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGKDAEIAARVLGIYAHLDRNFMTA 180
Query: 181 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQ 240
SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA Q
Sbjct: 181 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQ 240
Query: 241 NLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSD 300
NLGG EEGCGGESNYLFCVVEK MLV+NLD RIE GVDVKIGMV +EISTGDVIY EY D
Sbjct: 241 NLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDD 300
Query: 301 NFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTL 360
NFMRSGLE+MLLSLSPAELL+GDPISK TEKV+
Sbjct: 301 NFMRSGLEAMLLSLSPAELLLGDPISKATEKVF--------------------------- 360
Query: 361 TFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPA 420
D VGSLSF +N VA + LLLGYAGPA
Sbjct: 361 ----------------------DRVGSLSFTVALNAVACCTDCVVSIVCDQLLLGYAGPA 420
Query: 421 SNVRVEHVSRDCFKDGSALAEVMSLYENISQDNL-ADHHNPDTGFIEQKTDHLAIKEIMN 480
SNVRVEHVSRDCFKDGSALAEVMSLYENI DNL ADHH+PDT +K+D +AIKEIMN
Sbjct: 421 SNVRVEHVSRDCFKDGSALAEVMSLYENIDNDNLAADHHDPDTVLAGRKSDRIAIKEIMN 480
Query: 481 LPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGS 540
+P+LALQALALTIR+LKQFGLERIVSLGSSFRPFSCK+EM+LSGNTL QLEVLKNNDDGS
Sbjct: 481 MPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGS 540
Query: 541 ETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIE 600
ETGSLLQ MNHTLTIFGSRL RQWITHPLC+RDMIIARQEAVSEIAA+M SSKV QNI E
Sbjct: 541 ETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVYQNIRE 600
Query: 601 LDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAG 660
DE DSDVMVIEPELNY+LSSVLTTLGR PDIQRGITRIFHRTA PSEFIAVIQA+L+AG
Sbjct: 601 SDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAG 660
Query: 661 KQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLP 720
KQLQ+F+IDEEDDNYSS SMIGSKLLRKLILSASSSGLI+ AKLLSTISKEAADQGDLP
Sbjct: 661 KQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLP 720
Query: 721 NLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELAS 780
NLMII NNDQFPKV RARKE QS REKLDSLIT+YRKQLGMRKLEF+SV GTTHLIELA
Sbjct: 721 NLMII-NNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELAL 780
Query: 781 DVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAE 840
DVKVPSNWVK+NSTKKTIRYHPP VL+ALDELSL NEELMVASRDAWD FLSGFS YYAE
Sbjct: 781 DVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAE 840
Query: 841 FQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVP 900
FQ+AVQALASIDCLYSLAILSR+ NYVRPEFVHDDEP QI I SGRHPVLESTL GNFVP
Sbjct: 841 FQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTLQGNFVP 900
Query: 901 NDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRM 960
NDTN++VNGEHC+IVTGPNMGGKSCYIRQVALIALMAQVGS+VPA SAKL VLD IYTRM
Sbjct: 901 NDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRM 960
Query: 961 GASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLK 1020
GASD+IQ GRSTFLEEMTETSHIL HSTS SLVIIDELGRGTSTHDG+AIAYAALHNLL
Sbjct: 961 GASDSIQQGRSTFLEEMTETSHILHHSTSHSLVIIDELGRGTSTHDGVAIAYAALHNLLH 1020
Query: 1021 YKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVP 1080
+KKCL+LFVTHYPKVADI KEFP S GVYHVSYLTSH+ P+ S KS QDV YLYKLVP
Sbjct: 1021 HKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKS-AQDVIYLYKLVP 1080
Query: 1081 GVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF 1140
G+AESSFGFKVAQLAQIPLSCI RAT+MGV L+ + TRRAQRK++E QE SGK LE
Sbjct: 1081 GIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIH-LQEASGKGLEL 1139
Query: 1141 -----FLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
FL D DAYEEFFL LKA IC+ DD+ + Q ++ARSMAMDLLGR
Sbjct: 1141 ESSECFLED---RIDAYEEFFLFLKATICSPDDMGKRFLQFSQARSMAMDLLGR 1139
BLAST of MS000396 vs. NCBI nr
Match:
KAG7014774.1 (DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1747.6 bits (4525), Expect = 0.0e+00
Identity = 949/1209 (78.49%), Postives = 1010/1209 (83.54%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSP----SSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSS 60
MGKQKQQVISRFFAPKPKSP SSSSSS P QPFSPPKISATVTFSPSKRL+SS
Sbjct: 487 MGKQKQQVISRFFAPKPKSPSVSSSSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISS 546
Query: 61 ALASQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPP 120
ALASQ TPPKSSKRPKLSPHT NP+ + NPSLHKRFL+KFLEP EN+ + SN NPK P
Sbjct: 547 ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPT 606
Query: 121 GGDPKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTA 180
GGD KYTPLELQVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLD NFMTA
Sbjct: 607 GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGKDAEIAARVLGIYAHLDRNFMTA 666
Query: 181 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQ 240
SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA Q
Sbjct: 667 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQ 726
Query: 241 NLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSD 300
NLGG EEGCGGESNYLFCVVEK MLV+NLD RIE GVDVKIGMV +EISTGDVIY EY D
Sbjct: 727 NLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDD 786
Query: 301 NFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTL 360
NFMRSGLE+MLLSLSPAELL+GDPISK TEKV+
Sbjct: 787 NFMRSGLEAMLLSLSPAELLLGDPISKATEKVF--------------------------- 846
Query: 361 TFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPA 420
D VGSLSF +N VA + LLLGYAGPA
Sbjct: 847 ----------------------DRVGSLSFTVALNAVACCTDCVVSIVCDQLLLGYAGPA 906
Query: 421 SNVRVEHVSRDCFKDGSALAEVMSLYENISQDNL-ADHHNPDTGFIEQKTDHLAIKEIMN 480
SNVRVEHVSRDCFKDGSALAEVMSLYENI DNL ADHH+PDT +K+D +AIKEIMN
Sbjct: 907 SNVRVEHVSRDCFKDGSALAEVMSLYENIDNDNLAADHHDPDTVLAGRKSDRIAIKEIMN 966
Query: 481 LPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGS 540
+P+LALQALALTIR+LKQFGLERIVSLGSSFRPFSCK+EM+LSGNTL QLEVLKNNDDGS
Sbjct: 967 MPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGS 1026
Query: 541 ETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIE 600
ETGSLLQ MNHTLTIFGSRL RQWITHPLC+RDMIIARQEAVSEIAA+M SSKV QNI E
Sbjct: 1027 ETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVYQNIRE 1086
Query: 601 LDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSE------------ 660
DE DSDVMVIEPELNY+LSSVLTTLG PDIQRGITRIFHRTA PSE
Sbjct: 1087 SDEEDSDVMVIEPELNYILSSVLTTLGGAPDIQRGITRIFHRTAAPSEDDGSDISVSGLS 1146
Query: 661 ----FIAVIQAVLFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAK 720
FIAVIQA+L+AGKQLQ+F+IDEEDDNYSS SMIGSKLLRKLILSASSSGLI+ AK
Sbjct: 1147 FRFAFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAK 1206
Query: 721 LLSTISKEAADQGDLPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKL 780
LLSTISKEAADQGDLPNLMII NNDQFPKV RARKE QS REKLDSLIT+YRKQLGMRKL
Sbjct: 1207 LLSTISKEAADQGDLPNLMII-NNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKL 1266
Query: 781 EFVSVLGTTHLIELASDVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASR 840
EF+SV GTTHLIELA DVKVPSNWVK+NSTKKTIRYHPP VL+ALDELSL NEELMVASR
Sbjct: 1267 EFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASR 1326
Query: 841 DAWDVFLSGFSSYYAEFQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRS 900
DAWD FLSGFS YYAEFQ+AVQALASIDCLYSLAILSR+ NYVRPEFVHDDEP QI I S
Sbjct: 1327 DAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICS 1386
Query: 901 GRHPVLESTLGGNFVPNDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVP 960
GRHPVLESTL GNFVPNDTN++VNGEHC+IVTGPNMGGKSCYIRQVALIALMAQVGS+VP
Sbjct: 1387 GRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVP 1446
Query: 961 ALSAKLRVLDSIYTRMGASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTST 1020
A S KL VLD IYTRMGASD+IQ GRSTFLEEMTETSHIL HSTS SLVIIDELGRGTST
Sbjct: 1447 AFSVKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSHSLVIIDELGRGTST 1506
Query: 1021 HDGLAIAYAALHNLLKYKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSP 1080
HDG+AIAYAALHNLL +KKCL+LFVTHYPKVADI KEFP S GVYHVSYLTSH+ P+ S
Sbjct: 1507 HDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSG 1566
Query: 1081 LKSDHQDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKS 1140
KS QDV YLYKLVPG+AESSFGFKVAQLAQIPLSCI RAT+MGV L+ + TRRAQRK+
Sbjct: 1567 PKS-AQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKT 1626
Query: 1141 KEEQPSQETSGKRLEF-----FLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRA 1184
+E QE SGK LE FL D DAYEEFFL LKA IC+ DD+ + Q ++A
Sbjct: 1627 REIH-LQEASGKGLELESSECFLED---RIDAYEEFFLFLKATICSPDDMGKRFLQFSQA 1640
BLAST of MS000396 vs. NCBI nr
Match:
XP_022923129.1 (DNA mismatch repair protein MSH3 [Cucurbita moschata])
HSP 1 Score: 1740.7 bits (4507), Expect = 0.0e+00
Identity = 941/1191 (79.01%), Postives = 1001/1191 (84.05%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPS-SSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALA 60
MGKQKQQVISRFFAPKPKSPS SSSSS P Q FSPPKISATVTFSPSKRL+SSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 60
Query: 61 SQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGD 120
SQ TPPKSSKRPKLSPHT NP+ + NPSLHKRFL+KFLEP EN+ + SN NPK P GGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 120
Query: 121 PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIP 180
KYTPLELQVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLD NFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLG 240
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA QNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 240
Query: 241 GGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFM 300
G EEGCGGESNYLFCVVEK MLV+NLD RIE GVDVKIGMV +EISTGDVIY EY DNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 301 RSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFG 360
RSGLE+MLLSLSPAELL+GDPISK TEK
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEK-------------------------------- 360
Query: 361 NCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNV 420
LLLGYAGPASNV
Sbjct: 361 ------------------------------------------------LLLGYAGPASNV 420
Query: 421 RVEHVSRDCFKDGSALAEVMSLYENISQDNL-ADHHNPDTGFIEQKTDHLAIKEIMNLPD 480
RVEHVSRDCFKDGSALAEVMSLYENI +DNL ADHH+PDT E+K+D +AIKEIMN+P+
Sbjct: 421 RVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIKEIMNMPN 480
Query: 481 LALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETG 540
LALQALALTIR+LKQFGLERIVSLGSSFRPFSCK+EM+LSGNTL QLEVLKNNDDGSETG
Sbjct: 481 LALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETG 540
Query: 541 SLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDE 600
SLLQ MNHTLTIFGSRL RQWITHPLC+RDMIIARQEAVSEIAA+M SSKV+QNI E DE
Sbjct: 541 SLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDE 600
Query: 601 ADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQL 660
DSDVMVIEPELNY+LSSVLTTLGR PDIQRGITRIFHRTA PSEFIAVIQA+L+AGKQL
Sbjct: 601 EDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQL 660
Query: 661 QKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLM 720
Q+F+IDEEDDNYSS SMIGSKLLRKLILSASSSGLI+ AKLLSTISKEAADQGDLPNLM
Sbjct: 661 QQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLM 720
Query: 721 IINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVK 780
II NNDQFPKV RARKE QS REKLDSLIT+YRKQLGMRKLEF+SV GTTHLIELA DVK
Sbjct: 721 II-NNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVK 780
Query: 781 VPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQA 840
VPSNWVK+NSTKKTIRYHPP VL+ALDELSL NEELMVASRDAWD FLSGFS YYAEFQ+
Sbjct: 781 VPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQS 840
Query: 841 AVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDT 900
AVQALASIDCLYSLAILSR+ NYVRPEFVH DEP QI I SGRHPVLESTL GNFVPNDT
Sbjct: 841 AVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPNDT 900
Query: 901 NMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGAS 960
N++VNGEHC+IVTGPNMGGKSCYIRQVALIALMAQVGS+VPA SAKL VLD IYTRMGAS
Sbjct: 901 NLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGAS 960
Query: 961 DTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKK 1020
D+IQ GRSTFLEEMTETSHIL HSTSRSLVIIDELGRGTSTHDG+AIAYAALHNLL +KK
Sbjct: 961 DSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKK 1020
Query: 1021 CLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVA 1080
CL+LFVTHYPKVADI KEFP S GVYHVSYLTSH+ P+ S KS QDV YLYKLVPG+A
Sbjct: 1021 CLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKS-AQDVIYLYKLVPGIA 1080
Query: 1081 ESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF--- 1140
ESSFGFKVAQLAQIPLSCI RAT+MGV L+ + TRRAQRK++E QE SGK LE
Sbjct: 1081 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIH-LQEASGKGLELESS 1105
Query: 1141 --FLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
FL D DAYEEFFL LKA IC+ DD+ + Q ++ARSMAMDLLGR
Sbjct: 1141 ECFLED---RIDAYEEFFLFLKATICSPDDMGKRFLQFSQARSMAMDLLGR 1105
BLAST of MS000396 vs. ExPASy Swiss-Prot
Match:
O65607 (DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV=2)
HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 656/1167 (56.21%), Postives = 810/1167 (69.41%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKR-LLSSALA 60
MGKQKQQ ISRFFAPKPKSP+ P+ A PPKISATV+FSPSKR LLS LA
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHE----PNPVAESSTPPPKISATVSFSPSKRKLLSDHLA 60
Query: 61 SQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGD 120
+ S K+PKLSPHTQNPV P+P+LH+RFLQ+FLEP+ P + +
Sbjct: 61 A-----ASPKKPKLSPHTQNPV---PDPNLHQRFLQRFLEPSPEEYVPETSSSR------ 120
Query: 121 PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIP 180
KYTPLE QVVELK ++PDV+LMVEVGYRYRFFGEDAEIAA+VLGIYAH+DHNFMTAS+P
Sbjct: 121 -KYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 180
Query: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLG 240
TFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEAA+++
Sbjct: 181 TFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDIS 240
Query: 241 ---GGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSD 300
GGEEG G +SN+L CVV++ + E L C IE DV++G+VG+EISTG+V+YEE++D
Sbjct: 241 GGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFND 300
Query: 301 NFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTL 360
NFMRSGLE+++LSLSPAELL+G P+S+ TEK
Sbjct: 301 NFMRSGLEAVILSLSPAELLLGQPLSQQTEK----------------------------- 360
Query: 361 TFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPA 420
L+ +AGP
Sbjct: 361 ---------------------------------------------------FLVAHAGPT 420
Query: 421 SNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNL 480
SNVRVE S DCF +G+A+ EV+SL E IS NL D E+ L + IMN+
Sbjct: 421 SNVRVERASLDCFSNGNAVDEVISLCEKISAGNLEDDKEMKLEAAEKGMSCLTVHTIMNM 480
Query: 481 PDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSE 540
P L +QALALT HLKQFG ERI+ G+SFR S EM+LS NTL+QLEV+KNN DGSE
Sbjct: 481 PHLTVQALALTFCHLKQFGFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSE 540
Query: 541 TGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIEL 600
+GSL +MNHTLT++GSRL R W+THPLCDR++I AR +AVSEI+A M S SQ EL
Sbjct: 541 SGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSEL 600
Query: 601 DEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGK 660
E S+ ++ PE VLSSVLT + R+ DIQRGITRIFHRTA +EFIAV++A+L AGK
Sbjct: 601 VEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGK 660
Query: 661 QLQKFNIDEEDDNYS-SASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLP 720
Q+Q+ I ++ + S ++ + S LLRKLI SS +++ KLLS ++KEAA +GDL
Sbjct: 661 QIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLL 720
Query: 721 NLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELAS 780
++ +I ++DQFP++ AR+ V +REKLDS I +RK+L +R LEF+ V G THLIEL
Sbjct: 721 DI-LITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPV 780
Query: 781 DVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAE 840
D KVP NWVKVNSTKKTIRYHPP +++ LDEL+L E L + +R +WD FL FS YY +
Sbjct: 781 DSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTD 840
Query: 841 FQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVP 900
F+AAVQALA++DCL+SL+ LSRN NYVRPEFV D EP +I I+SGRHPVLE+ L NFVP
Sbjct: 841 FKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVP 900
Query: 901 NDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRM 960
NDT ++ GE+C+I+TGPNMGGKSCYIRQVALI++MAQVGSFVPA AKL VLD ++TRM
Sbjct: 901 NDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRM 960
Query: 961 GASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLK 1020
GASD+IQ GRSTFLEE++E SHI++ +SRSLVI+DELGRGTSTHDG+AIAYA L +LL
Sbjct: 961 GASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLA 1020
Query: 1021 YKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVP 1080
K+CL+LFVTHYP++A+I FP SVG YHVSYLT ++ DH DVTYLYKLV
Sbjct: 1021 EKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDKG----SYDHDDVTYLYKLVR 1055
Query: 1081 GVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF 1140
G+ SFGFKVAQLAQIP SCI RA M L+A E R +R ++ +P
Sbjct: 1081 GLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEA-EVRARERNTRMGEPEGHEEP----- 1055
Query: 1141 FLRDAGESEDAYEEFFLSLKALICAAD 1163
R A ES A + F LK + D
Sbjct: 1141 --RGAEESISALGDLFADLKFALSEED 1055
BLAST of MS000396 vs. ExPASy Swiss-Prot
Match:
P20585 (DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4)
HSP 1 Score: 565.8 bits (1457), Expect = 1.1e-159
Identity = 368/1033 (35.62%), Postives = 548/1033 (53.05%), Query Frame = 0
Query: 122 YTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPTF 181
YTPLELQ +E+K++H D +L VE GY+YRFFGEDAEIAA+ L IY HLDHNFMTASIPT
Sbjct: 229 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 288
Query: 182 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--------- 241
RL VHVRRLV+ GYKVGVVKQTETAA+KA G N+ F R L+ALYTK+TL
Sbjct: 289 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLI 348
Query: 242 EAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYE 301
+ + E ++YL C+ E EN+ R + ++ IG+VG++ +TG+V+++
Sbjct: 349 KLDDAVNVDEIMTDTSTSYLLCISEN---KENV--RDKKKGNIFIGIVGVQPATGEVVFD 408
Query: 302 EYSDNFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFP 361
+ D+ RS LE+ + SL P ELL+ +S+ TE + R T
Sbjct: 409 SFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRAT------------------- 468
Query: 362 CFTLTFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGY 421
+VS+ +
Sbjct: 469 -----------------------------------------SVSVQD------------- 528
Query: 422 AGPASNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKE 481
+RVE + F+ A V Y + D I
Sbjct: 529 ----DRIRVERMDNIYFEYSHAFQAVTEFYAKDTVDIKGSQ---------------IISG 588
Query: 482 IMNLPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVE-MSLSGNTLKQLEVLKNN 541
I+NL + +LA I++LK+F LE+++S +F+ S K+E M+++G TL+ LE+L+N
Sbjct: 589 IVNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQ 648
Query: 542 DDGSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQ 601
D GSLL ++HT T FG R ++W+T PL I AR +AVSE+ S +S
Sbjct: 649 TDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS----- 708
Query: 602 NIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAV 661
V + L + PDI+RG+ I+H+ + EF +++ +
Sbjct: 709 ---------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTL 768
Query: 662 LFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQ 721
+ Q + S I S LLR +IL L++ L ++++AA
Sbjct: 769 YHLKSEFQAI-------IPAVNSHIQSDLLRTVILEIPE--LLSPVEHYLKILNEQAAKV 828
Query: 722 GDLPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLI 781
GD L + FP + + + E+Q V +++ + RK L ++V+V G +I
Sbjct: 829 GDKTEL--FKDLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMI 888
Query: 782 ELASDVK--VPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGF 841
E+ + +P++WVKV STK R+H P ++ L+ + E+L++ W FL F
Sbjct: 889 EIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKF 948
Query: 842 SSYYAEFQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTL 901
S +Y AV LA++DC++SLA +++ +Y RP E +I I++GRHPV++ L
Sbjct: 949 SEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLL 1008
Query: 902 G--GNFVPNDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRV 961
G +VPN+T+++ + E I+TGPNMGGKS YI+QVALI +MAQ+GS+VPA A + +
Sbjct: 1009 GEQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGI 1068
Query: 962 LDSIYTRMGASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAY 1021
+D I+TRMGA+D I G+STF+EE+T+T+ I++ +TS+SLVI+DELGRGTSTHDG+AIAY
Sbjct: 1069 VDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAY 1109
Query: 1022 AALHNLLKYKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDH--Q 1081
A L ++ K L LFVTHYP V ++ K + VG YH+ +L S L P ++
Sbjct: 1129 ATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPD 1109
Query: 1082 DVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPS 1139
VT+LY++ G+A S+G VA+LA +P + ++A KSKE +
Sbjct: 1189 FVTFLYQITRGIAARSYGLNVAKLADVPGEIL---------------KKAAHKSKELEGL 1109
BLAST of MS000396 vs. ExPASy Swiss-Prot
Match:
P13705 (DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3)
HSP 1 Score: 561.2 bits (1445), Expect = 2.7e-158
Identity = 354/1012 (34.98%), Postives = 535/1012 (52.87%), Query Frame = 0
Query: 122 YTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPTF 181
YTPLELQ +++K++H D +L VE GY+YRFFGEDAEIAA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 182 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--------- 241
RL VHVRRLV+ GYKVGVVKQTETAA+KA G NK F R L+ALYTK+TL
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTLIGEDVNPLI 306
Query: 242 EAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYE 301
++ E +NYL C+ E E + + + ++ +G+VG++ +TG+V+++
Sbjct: 307 RLDDSVNIDEVMTDTSTNYLLCIYE-----EKENIKDKKKGNLSVGVVGVQPATGEVVFD 366
Query: 302 EYSDNFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFP 361
+ D+ R LE+ + SL P ELL+ +S+ TE + R T NV R
Sbjct: 367 CFQDSASRLELETRISSLQPVELLLPSDLSEPTEMLIQRAT-NVSVRD------------ 426
Query: 362 CFTLTFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGY 421
Sbjct: 427 ------------------------------------------------------------ 486
Query: 422 AGPASNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKE 481
+RVE ++ F+ A V Y D+ ++
Sbjct: 487 ----DRIRVERMNNTYFEYSHAFQTVTEFYAREIVDSQGSQ---------------SLSG 546
Query: 482 IMNLPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVE-MSLSGNTLKQLEVLKNN 541
++NL + ALA IR+LK+F LE+++S SF+ S +E M ++G TL+ LE+++N
Sbjct: 547 VINLEKPVICALAAVIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEMVQNQ 606
Query: 542 DDGSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQ 601
D GSLL ++HT T FG R + W+T PL I AR +AVS++ S +S
Sbjct: 607 TDMKTKGSLLWVLDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS----- 666
Query: 602 NIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAV 661
V + L + PD++RG+ I+H+ + EF +++++
Sbjct: 667 ---------------------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSL 726
Query: 662 LFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQ 721
+LQ + S + S LLR LI+ L++ L ++ AA
Sbjct: 727 CQLKSELQAL-------MPAVNSHVQSDLLRALIVE-----LLSPVEHYLKVLNGPAAKV 786
Query: 722 GDLPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLI 781
GD L + FP + + + E+Q V + + +RK L + L++V+V G +I
Sbjct: 787 GDKTEL--FKDLSDFPLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMI 846
Query: 782 ELASDVK--VPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGF 841
E+ + +P++WVKV STK R+HPP ++ + L+ + E+L++ W FL F
Sbjct: 847 EIKNSAVSCIPADWVKVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENF 906
Query: 842 SSYYAEFQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTL 901
+Y AV LA++DC++SLA +++ NY RP E +I I++GRHP+++ L
Sbjct: 907 GEHYHTLCKAVDHLATVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLL 966
Query: 902 G--GNFVPNDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRV 961
G FVPN T+++ + E I+TGPNMGGKS YI+QV L+ +MAQ+GS+VPA A + +
Sbjct: 967 GEQDQFVPNSTSLS-DSERVMIITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGI 1026
Query: 962 LDSIYTRMGASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAY 1021
+D I+TRMGA+D I GRSTF+E++T+T+ I++ ++ +SLVI+DELGRGTSTHDG+AIAY
Sbjct: 1027 VDGIFTRMGAADNIYKGRSTFMEQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAY 1057
Query: 1022 AALHNLLKYKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTS--HQNPTLSPLKSDHQ 1081
A L ++ K L LFVTHYP V ++ K +P VG YH+ +L + ++
Sbjct: 1087 ATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD 1057
Query: 1082 DVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQR 1118
VT+LY++ G+A S+G VA+LA +P +++A L+ L + R +R
Sbjct: 1147 SVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKR 1057
BLAST of MS000396 vs. ExPASy Swiss-Prot
Match:
Q1ZXH0 (DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum OX=44689 GN=msh3 PE=3 SV=1)
HSP 1 Score: 521.9 bits (1343), Expect = 1.8e-146
Identity = 357/1062 (33.62%), Postives = 544/1062 (51.22%), Query Frame = 0
Query: 113 KPPPGGD--------PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLG 172
KP GG P YTPLE Q + +KK +PD +LMVE GY+Y+FFGEDAE+A KVL
Sbjct: 436 KPTKGGSKASAKKKGPAYTPLEQQYIAIKKENPDTVLMVECGYKYKFFGEDAEVANKVLN 495
Query: 173 IYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLS 232
IY+++ NF+ SIPT RL H+RRLV AGYKVG+V+QTETAA+KA S+K PF R L+
Sbjct: 496 IYSYVAKNFLNCSIPTQRLFFHLRRLVMAGYKVGIVEQTETAALKAISSSKSQPFERKLT 555
Query: 233 ALYTKATL-----------EAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGV 292
+YT +T + Q L E N ++ E +D E+
Sbjct: 556 RVYTSSTFIDDDIDDQLTSSSPQFLVSFYESTPKNKNDDVIKKQRDNEEEGIDSSNESST 615
Query: 293 DVKIGMVGIEISTGDVIYEEYSDNFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVT 352
I V + + TG++IY+ + DN MRS LE++L + P+E+L+ T
Sbjct: 616 ST-ISFVAVSVKTGEIIYDTFKDNVMRSQLETILTHIKPSEILIPP-------------T 675
Query: 353 CNVVSRKKCEKLQSSFLFPCFTLTFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFV 412
V+++K N +
Sbjct: 676 TTTVNKQKVN-----------------------------------------------NGI 735
Query: 413 AVSIYNFPNNFRHSLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADH 472
+ Y F +N L Y ++NVR + + + +L +++ YE+ S +N ++
Sbjct: 736 GTNHYYF-SNLTSKCLKTYT-KSTNVRTQAMDSQLYDYEYSLGKLIDFYEDESNNNNNNN 795
Query: 473 HNPDTGFIEQKTDHLAIKEIMNLPDLALQALALTIRHLKQF-GLERIVSLGSSFRPFSCK 532
+ D +K +N + L + + +L +F I+ + S+F+ F
Sbjct: 796 NCEDV--------LKFVKSTLNKEQII--CLGILLSYLNEFIHFGSILKVESNFKAFRVS 855
Query: 533 VEMSLSGNTLKQLEVLKNNDDGSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIA 592
+ L +T+ LE+L N D E GSL+ MN T T GSR+F WI PL ++I
Sbjct: 856 NHLVLPHSTIVNLELLVNESDNKEKGSLIWLMNRTSTFSGSRMFINWICKPLNQLELIKE 915
Query: 593 RQEAVSEIAASMASSKVSQNIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGIT 652
RQ+AV E+ + ++ ++S + PD+QR ++
Sbjct: 916 RQDAVEELVNGIKTNSPP----------------------IVSIISLFKSHIPDLQRNLS 975
Query: 653 RIFHRT-ATPSEFIAVIQAVLFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSS 712
RI+++ TP EF+ + ++ + ++ N + ++S + L+ S
Sbjct: 976 RIYYKVQCTPKEFLNTMTSLQRIVELFKEINNNNSSYKFNSTLLNSIFKLQNDNKDGDSD 1035
Query: 713 GLINTGAK---------LLSTISKEAADQ-----GDLPNLMIINNNDQFPKVGRARKEVQ 772
G + LS I+KE A + D NL + + +++ K+ +++++
Sbjct: 1036 SFDYIGGEDKLSKRIKYFLSNINKETAKEYGTVGCDKSNLWV--DLEKYEKIRETKEKIE 1095
Query: 773 SVREKLDSLITLYRKQLGMRKLEF--VSVLGTTHLIELASDVK-VPSNWVKVNSTKKTIR 832
V ++ +++ RK+L LE+ + LG +L+EL K VP +W+KVNST+K R
Sbjct: 1096 QVEKEFKNVLKNIRKELSKPSLEYHHMPGLGLEYLLELPPSFKAVPKSWIKVNSTQKMAR 1155
Query: 833 YHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAVQALASIDCLYSLAI 892
YH P VL L LS E L + S+++W FL FS Y+ F V ++++DCL+SLA
Sbjct: 1156 YHAPEVLEQLKILSQSRETLKIQSQESWISFLGEFSVDYSLFSNFVNKISNLDCLFSLAK 1215
Query: 893 LSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLG---GNFVPNDTNMNVNGEHCEIVT 952
+S Y+RP+FV + + G I I +GRHPV+E+ L G++VPN + + I+T
Sbjct: 1216 VSSLEGYIRPQFVKEKKDGGIQIENGRHPVVEAILSGSDGSYVPNTIELRESACKSMIIT 1275
Query: 953 GPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDTIQLGRSTFLEE 1012
GPNMGGKS +RQ ALI +MAQVG FVPA S L V D+IYTRMGA D+I G+STF E
Sbjct: 1276 GPNMGGKSSLLRQTALIVIMAQVGCFVPATSCSLSVFDAIYTRMGARDSIGTGKSTFFIE 1335
Query: 1013 MTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCLLLFVTHYPKVA 1072
+ ETS IL++ST +LVI+DELGRGTST+DG+AIAY+ L +++ KC LFVTHYP +A
Sbjct: 1336 LEETSDILKNSTQNTLVILDELGRGTSTNDGVAIAYSTLKYIVEVMKCYCLFVTHYPLLA 1395
Query: 1073 DIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAESSFGFKVAQLAQ 1132
+ ++P VG +H+ YL Q+ L KS V +LYKLV G A++S+G +A+LA
Sbjct: 1396 QLELQYPTQVGNFHMGYLEEKQDQQLQ--KSVIPKVIFLYKLVKGAAQNSYGLNIARLAG 1398
Query: 1133 IPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRL 1134
+P+ I A K ++ TRRA ++Q E K +
Sbjct: 1456 LPMEVIADALKKSNEMKESITRRANLSDGKDQQQIENEIKSI 1398
BLAST of MS000396 vs. ExPASy Swiss-Prot
Match:
B0YCF6 (DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=msh3 PE=3 SV=1)
HSP 1 Score: 505.8 bits (1301), Expect = 1.4e-141
Identity = 350/1044 (33.52%), Postives = 535/1044 (51.25%), Query Frame = 0
Query: 99 EPTENTLQPSNPNPKPPPGGDPKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEI 158
E E+ QP + G K TPLE QV+E+K++H D +L+VEVGY++RFFGEDA I
Sbjct: 187 EDDESPPQPRSKGKGLSKKGGSKLTPLEKQVIEIKRKHMDTILVVEVGYKFRFFGEDARI 246
Query: 159 AAKVLGIY--------------AHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTE 218
AAK L I AHLD F +ASIP RL+VHV+RLVSAGYKVGVV+Q E
Sbjct: 247 AAKELSIVCIPGKMRFDEHPSEAHLD-RFASASIPVHRLHVHVKRLVSAGYKVGVVRQLE 306
Query: 219 TAAIKAHGSNKLGPFCRGLSALYTKAT-LEAAQNLGGGEEGCGG----ESNYLFCVVE-- 278
TAA+KA G N+ PF R L+ LYTK T ++ + L G G + Y+ C+ E
Sbjct: 307 TAALKAAGDNRNAPFSRKLTNLYTKGTYVDDVEGLDGATPAASGGASPATGYMLCITETN 366
Query: 279 -KGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMRSGLESMLLSLSPAELL 338
KG N V +G+V ++ +TGDVIY+++ D FMRS +E+ LL ++P EL+
Sbjct: 367 AKGW---------GNDEKVHVGIVAVQPNTGDVIYDDFDDGFMRSEVETRLLHIAPCELV 426
Query: 339 VGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGNCTLSFFFFLFLFPALL 398
+ +SK TEK +V KL TFG+
Sbjct: 427 IVGELSKATEK--------LVQHLSGSKLN----------TFGD---------------- 486
Query: 399 ILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVRVEHVSRDCFKDGSALA 458
VRV+ V+ K +A+A
Sbjct: 487 -----------------------------------------KVRVDRVA----KKKTAVA 546
Query: 459 EVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLALQALALTIRHLKQFGL 518
E S N L + D + +L +++++NLP+ L+ I+HL ++GL
Sbjct: 547 ESHSHVANFYAAKLKAANTAD----DAPASNL-LQKVLNLPEQVTVCLSAMIQHLTEYGL 606
Query: 519 ERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSLLQSMNHTLTIFGSRLF 578
E I L F+ FS + M L+ NTL LE+ +N D S GSL +++ T T FG RL
Sbjct: 607 EHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHSAKGSLFWTLDRTQTRFGQRLL 666
Query: 579 RQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEADSDVMVIEPELNYVLSS 638
R+W+ PL D++ + R AV E+ + PE
Sbjct: 667 RKWVGRPLLDKERLEERVNAVEELKS-------------------------PERTVQAER 726
Query: 639 VLTTLGR-TPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQLQKFNIDEEDDNYSSASM 698
+ LG+ D+++ + RI++ T E + V+Q + ++ ++ D+ ++ +
Sbjct: 727 LKIMLGKIKSDLEKNLIRIYYGKCTRPELLTVLQTLQTIAQEY--VDVKTPQDSGFTSPI 786
Query: 699 IGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMIINNNDQFPKVGRARKE 758
+G + R ++ K L+ I+ AA D +++ + +
Sbjct: 787 LGEAIAR-------VPSILGDVVKFLNKINMHAARNDD--KYEFFRESEETEGISEHKCG 846
Query: 759 VQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIEL----ASDVKVPSNWVKVNSTKK 818
+ SV +L+ ++ L K+ +V+ G +LIE+ A+ +VP++WVKV+ TKK
Sbjct: 847 IASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVENSAAAIKRVPASWVKVSGTKK 906
Query: 819 TIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAVQALASIDCLYS 878
R+H P V+ L + E L A A+ L+ +S Y F+ VQ+LA++DCL S
Sbjct: 907 VSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIASNYQSFRDCVQSLATLDCLLS 966
Query: 879 LAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNMNVNGEHCEIVT 938
LA ++ YV+PE+ + I + GRHP++E L ++VPND +++ + +VT
Sbjct: 967 LAAIASQPGYVKPEYT---DQTCIHVEQGRHPMVEQLLLDSYVPNDIDLDSDKTRALLVT 1026
Query: 939 GPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDTIQLGRSTFLEE 998
GPNMGGKS Y+RQ+ALIA+MAQ+GS+VPA SAKL +LD+++TRMGA D + G STF+ E
Sbjct: 1027 GPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVE 1086
Query: 999 MTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCLLLFVTHYPKVA 1058
++ET+ IL+ +T RSLVI+DELGRGTSTHDG+AIA A L +++ + L LF+THY ++
Sbjct: 1087 LSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRTIRSLTLFITHYQHLS 1089
Query: 1059 DIVKEFP-RSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAESSFGFKVAQLA 1115
++ + FP + H+ + S +++T+LY++ GVA S+G VA+LA
Sbjct: 1147 NMAQSFPDHELRNVHMRFTESG--------SGKDEEITFLYEVGEGVAHRSYGLNVARLA 1089
BLAST of MS000396 vs. ExPASy TrEMBL
Match:
A0A6J1CI92 (DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 SV=1)
HSP 1 Score: 2096.2 bits (5430), Expect = 0.0e+00
Identity = 1102/1184 (93.07%), Postives = 1104/1184 (93.24%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 60
MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS
Sbjct: 9 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 68
Query: 61 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 120
QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP
Sbjct: 69 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 128
Query: 121 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 180
KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT
Sbjct: 129 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 188
Query: 181 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 240
FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG
Sbjct: 189 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 248
Query: 241 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 300
GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR
Sbjct: 249 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 308
Query: 301 SGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGN 360
SGLESMLLSLSPAELLVGDPISKLTEK
Sbjct: 309 SGLESMLLSLSPAELLVGDPISKLTEK--------------------------------- 368
Query: 361 CTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVR 420
LLLGYAGPASNVR
Sbjct: 369 -----------------------------------------------LLLGYAGPASNVR 428
Query: 421 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 480
VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA
Sbjct: 429 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 488
Query: 481 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 540
LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL
Sbjct: 489 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 548
Query: 541 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 600
LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD
Sbjct: 549 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 608
Query: 601 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQLQK 660
SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAV+QAVLFAGKQLQK
Sbjct: 609 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVVQAVLFAGKQLQK 668
Query: 661 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 720
FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII
Sbjct: 669 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 728
Query: 721 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 780
NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP
Sbjct: 729 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 788
Query: 781 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 840
SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV
Sbjct: 789 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 848
Query: 841 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 900
QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM
Sbjct: 849 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 908
Query: 901 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDT 960
NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLD+IYTRMGASDT
Sbjct: 909 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDAIYTRMGASDT 968
Query: 961 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1020
IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL
Sbjct: 969 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1028
Query: 1021 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1080
LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES
Sbjct: 1029 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1088
Query: 1081 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1140
SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA
Sbjct: 1089 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1112
Query: 1141 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR
Sbjct: 1149 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1112
BLAST of MS000396 vs. ExPASy TrEMBL
Match:
A0A6J1CHA4 (DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 SV=1)
HSP 1 Score: 2096.2 bits (5430), Expect = 0.0e+00
Identity = 1102/1184 (93.07%), Postives = 1104/1184 (93.24%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 60
MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS
Sbjct: 9 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALAS 68
Query: 61 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 120
QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP
Sbjct: 69 QSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGDP 128
Query: 121 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 180
KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT
Sbjct: 129 KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIPT 188
Query: 181 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 240
FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG
Sbjct: 189 FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLGG 248
Query: 241 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 300
GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR
Sbjct: 249 GEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMR 308
Query: 301 SGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGN 360
SGLESMLLSLSPAELLVGDPISKLTEK
Sbjct: 309 SGLESMLLSLSPAELLVGDPISKLTEK--------------------------------- 368
Query: 361 CTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVR 420
LLLGYAGPASNVR
Sbjct: 369 -----------------------------------------------LLLGYAGPASNVR 428
Query: 421 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 480
VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA
Sbjct: 429 VEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLA 488
Query: 481 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 540
LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL
Sbjct: 489 LQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSL 548
Query: 541 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 600
LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD
Sbjct: 549 LQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEAD 608
Query: 601 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQLQK 660
SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAV+QAVLFAGKQLQK
Sbjct: 609 SDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVVQAVLFAGKQLQK 668
Query: 661 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 720
FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII
Sbjct: 669 FNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLMII 728
Query: 721 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 780
NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP
Sbjct: 729 NNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVKVP 788
Query: 781 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 840
SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV
Sbjct: 789 SNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAV 848
Query: 841 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 900
QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM
Sbjct: 849 QALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNM 908
Query: 901 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDT 960
NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLD+IYTRMGASDT
Sbjct: 909 NVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDAIYTRMGASDT 968
Query: 961 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1020
IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL
Sbjct: 969 IQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCL 1028
Query: 1021 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1080
LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES
Sbjct: 1029 LLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAES 1088
Query: 1081 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1140
SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA
Sbjct: 1089 SFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEFFLRDA 1112
Query: 1141 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR
Sbjct: 1149 GESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1112
BLAST of MS000396 vs. ExPASy TrEMBL
Match:
A0A6J1E5H0 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111430887 PE=3 SV=1)
HSP 1 Score: 1740.7 bits (4507), Expect = 0.0e+00
Identity = 941/1191 (79.01%), Postives = 1001/1191 (84.05%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPS-SSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALA 60
MGKQKQQVISRFFAPKPKSPS SSSSS P Q FSPPKISATVTFSPSKRL+SSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 60
Query: 61 SQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGD 120
SQ TPPKSSKRPKLSPHT NP+ + NPSLHKRFL+KFLEP EN+ + SN NPK P GGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 120
Query: 121 PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIP 180
KYTPLELQVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLD NFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLG 240
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA QNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 240
Query: 241 GGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFM 300
G EEGCGGESNYLFCVVEK MLV+NLD RIE GVDVKIGMV +EISTGDVIY EY DNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 301 RSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFG 360
RSGLE+MLLSLSPAELL+GDPISK TEK
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEK-------------------------------- 360
Query: 361 NCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNV 420
LLLGYAGPASNV
Sbjct: 361 ------------------------------------------------LLLGYAGPASNV 420
Query: 421 RVEHVSRDCFKDGSALAEVMSLYENISQDNL-ADHHNPDTGFIEQKTDHLAIKEIMNLPD 480
RVEHVSRDCFKDGSALAEVMSLYENI +DNL ADHH+PDT E+K+D +AIKEIMN+P+
Sbjct: 421 RVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIKEIMNMPN 480
Query: 481 LALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETG 540
LALQALALTIR+LKQFGLERIVSLGSSFRPFSCK+EM+LSGNTL QLEVLKNNDDGSETG
Sbjct: 481 LALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETG 540
Query: 541 SLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDE 600
SLLQ MNHTLTIFGSRL RQWITHPLC+RDMIIARQEAVSEIAA+M SSKV+QNI E DE
Sbjct: 541 SLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDE 600
Query: 601 ADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQL 660
DSDVMVIEPELNY+LSSVLTTLGR PDIQRGITRIFHRTA PSEFIAVIQA+L+AGKQL
Sbjct: 601 EDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQL 660
Query: 661 QKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLM 720
Q+F+IDEEDDNYSS SMIGSKLLRKLILSASSSGLI+ AKLLSTISKEAADQGDLPNLM
Sbjct: 661 QQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLM 720
Query: 721 IINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVK 780
II NNDQFPKV RARKE QS REKLDSLIT+YRKQLGMRKLEF+SV GTTHLIELA DVK
Sbjct: 721 II-NNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVK 780
Query: 781 VPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQA 840
VPSNWVK+NSTKKTIRYHPP VL+ALDELSL NEELMVASRDAWD FLSGFS YYAEFQ+
Sbjct: 781 VPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQS 840
Query: 841 AVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDT 900
AVQALASIDCLYSLAILSR+ NYVRPEFVH DEP QI I SGRHPVLESTL GNFVPNDT
Sbjct: 841 AVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPNDT 900
Query: 901 NMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGAS 960
N++VNGEHC+IVTGPNMGGKSCYIRQVALIALMAQVGS+VPA SAKL VLD IYTRMGAS
Sbjct: 901 NLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGAS 960
Query: 961 DTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKK 1020
D+IQ GRSTFLEEMTETSHIL HSTSRSLVIIDELGRGTSTHDG+AIAYAALHNLL +KK
Sbjct: 961 DSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKK 1020
Query: 1021 CLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVA 1080
CL+LFVTHYPKVADI KEFP S GVYHVSYLTSH+ P+ S KS QDV YLYKLVPG+A
Sbjct: 1021 CLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKS-AQDVIYLYKLVPGIA 1080
Query: 1081 ESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF--- 1140
ESSFGFKVAQLAQIPLSCI RAT+MGV L+ + TRRAQRK++E QE SGK LE
Sbjct: 1081 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIH-LQEASGKGLELESS 1105
Query: 1141 --FLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
FL D DAYEEFFL LKA IC+ DD+ + Q ++ARSMAMDLLGR
Sbjct: 1141 ECFLED---RIDAYEEFFLFLKATICSPDDMGKRFLQFSQARSMAMDLLGR 1105
BLAST of MS000396 vs. ExPASy TrEMBL
Match:
A0A6J1J5R3 (DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111482846 PE=3 SV=1)
HSP 1 Score: 1731.8 bits (4484), Expect = 0.0e+00
Identity = 934/1191 (78.42%), Postives = 998/1191 (83.80%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPS-SSSSSPPSIPAPQPFSPPKISATVTFSPSKRLLSSALA 60
MGKQKQQVISRFFAPKPKSPS SSSSS P QPFSPPKISATVTFSPSKRL+SSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISSALA 60
Query: 61 SQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGD 120
SQ TPPKSSKRPKLSPHT NP+ + NP+LHKRFL+KFL+P EN+ + SN NPK P GGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPTGGD 120
Query: 121 PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIP 180
KYTPLELQVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLD NFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLG 240
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA QNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQNLG 240
Query: 241 GGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSDNFM 300
G EEGCGGESNYLFCVVEK MLV+NLD RIE GVDVKIGMV +EISTGDVIY EY DNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 301 RSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFG 360
RSGLE+MLLSLSPAELL+GDPISK TEK
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEK-------------------------------- 360
Query: 361 NCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNV 420
LLLGYAGPASNV
Sbjct: 361 ------------------------------------------------LLLGYAGPASNV 420
Query: 421 RVEHVSRDCFKDGSALAEVMSLYENISQDNL-ADHHNPDTGFIEQKTDHLAIKEIMNLPD 480
RVEHVSRDCFKDGSALAEV SLYENI +DNL ADHH+PDT +K+D +AIKEIMN+P+
Sbjct: 421 RVEHVSRDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPN 480
Query: 481 LALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETG 540
LALQALALTIR+LKQFGLERIVSLGSSFRPFSCK+EM+LSGNTL QLEVLKNNDDGSETG
Sbjct: 481 LALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETG 540
Query: 541 SLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDE 600
SLLQ MNHTLTIFGSRL RQWITHPLC+RDMIIARQEAVSEIAA+M S+KVSQNI E +E
Sbjct: 541 SLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEE 600
Query: 601 ADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGKQL 660
DSDVMVIEPELNY+LSSVLTTLGR PDIQRGITRIFHRTA PSEFIAVIQA+L+AGKQL
Sbjct: 601 EDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQL 660
Query: 661 QKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLPNLM 720
Q+F+IDEEDDNYSS SMIGSKLLRKLILSASSSGLI+ AKLLSTISKEAADQGDLPNLM
Sbjct: 661 QQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLM 720
Query: 721 IINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDVK 780
II NNDQFPKV RARKE QS REKLDSLIT+YRKQLGMRKLEF SV GTTHLIELA DVK
Sbjct: 721 II-NNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALDVK 780
Query: 781 VPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQA 840
VPSNWVK+NSTKKTIRYHPP VL+ALDELSL NEELMVASR+AWD FLSGFS YYAEFQ+
Sbjct: 781 VPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQS 840
Query: 841 AVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDT 900
AVQALASIDCLYSLAILSR+ NYVRPEFVHDDEP QI I SGRHPVLEST+ GNFVPNDT
Sbjct: 841 AVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVPNDT 900
Query: 901 NMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGAS 960
N++VNGEHC+IVTGPNMGGKSCYIRQVALIALMAQVGS+VPA SAKL VLD IYTRMGAS
Sbjct: 901 NLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGAS 960
Query: 961 DTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKK 1020
D+IQ GRSTFLEEMTETSHIL HSTSRSLVIIDELGRGTSTHDG+AIAYAAL NLL +KK
Sbjct: 961 DSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKK 1020
Query: 1021 CLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVA 1080
CL+LFVTHYPKVADI KEFP S GVYHVSYLTSH+ P+ S KS QDV YLYKLVPG+A
Sbjct: 1021 CLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKS-AQDVIYLYKLVPGIA 1080
Query: 1081 ESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF--- 1140
ESSFGFKVAQLAQIPL CI RAT+MGV L+ + TRRAQRK++ E QE SGK LE
Sbjct: 1081 ESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTR-EMHLQEASGKGLELESS 1105
Query: 1141 --FLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMDLLGR 1185
FL D DAYEEFFL LKA IC+ DD+ + Q ++ARSMAMDLLGR
Sbjct: 1141 ECFLED---RIDAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMDLLGR 1105
BLAST of MS000396 vs. ExPASy TrEMBL
Match:
A0A5A7SWU6 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00120 PE=3 SV=1)
HSP 1 Score: 1702.2 bits (4407), Expect = 0.0e+00
Identity = 918/1204 (76.25%), Postives = 1001/1204 (83.14%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPA------PQPFSPPKISATVTFSPSKRLL 60
MGKQKQQVISRFFAPKPK PS SSSS S A QPFSP K+SATVTFSPSKRL+
Sbjct: 1 MGKQKQQVISRFFAPKPKFPSLSSSSSSSATAADITLPTQPFSPAKVSATVTFSPSKRLI 60
Query: 61 SSALASQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKP 120
SSA+ASQ TPPKSSKRPKLSPHT NP+ +PNPSLH+RFL KFLEPT+++ QPSN NP+
Sbjct: 61 SSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKFLEPTDDSFQPSNQNPRT 120
Query: 121 PPGGDP--KYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHN 180
G DP KYTPLE QVV+LKKR+PDVLLMVEVGYRYRFFG+DAEIAA+VLGIYAHLDHN
Sbjct: 121 SNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDHN 180
Query: 181 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 240
FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL
Sbjct: 181 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 240
Query: 241 EAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYE 300
EAAQ+LGG EEGC GESNYLFC+VE MLV+NLDCRIENGVDVKIG+V +EISTGDVIY
Sbjct: 241 EAAQDLGGAEEGCAGESNYLFCLVENSMLVDNLDCRIENGVDVKIGIVAMEISTGDVIYR 300
Query: 301 EYSDNFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNV-----VSRKKCEKLQS 360
EY DNFMRSGLE+MLLSL+PAELL+GDPISK TEKV V+ + + E+
Sbjct: 301 EYDDNFMRSGLEAMLLSLAPAELLLGDPISKPTEKVVVEVSVRMDVSLYDEKDTMEEGSG 360
Query: 361 SFLFPCFTLTFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHS 420
FL C+ C L LI D + ++ P + N RHS
Sbjct: 361 YFLGKCWV-----CGL----------IALIRDCLDAILRTFPRRAEIQEPGSLENGGRHS 420
Query: 421 -------LLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGF 480
LLLGYAGPASNVRVE SRDCFK+GSALAEVMSLYENI QDNL + +NP+T
Sbjct: 421 SRLSSNLLLLGYAGPASNVRVERASRDCFKNGSALAEVMSLYENIDQDNLTEDNNPETVL 480
Query: 481 IEQKTDHLAIKEIMNLPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGN 540
I QK+D AIKEI+N+P+LALQA ALTIRHLKQFGLER+VSL SSFRPFSCK+EM+LSGN
Sbjct: 481 IGQKSDLTAIKEIVNMPNLALQAFALTIRHLKQFGLERVVSLASSFRPFSCKMEMTLSGN 540
Query: 541 TLKQLEVLKNNDDGSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEI 600
TL QLEVLKNNDDGSETGSLL MNHTLTIFGSRL RQWITHPLCDR+MIIARQEAVSEI
Sbjct: 541 TLTQLEVLKNNDDGSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEI 600
Query: 601 AASMASSKVSQNIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTAT 660
AASM SSKVS N LDE DSDV+VIEPELNY+LSSVLTTLGR PDIQRGITRIFHRTA
Sbjct: 601 AASMVSSKVSSNNGVLDEEDSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAA 660
Query: 661 PSEFIAVIQAVLFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKL 720
PSEFIAVIQA+LFAGKQLQ+F+IDEEDDN SS S+IGSKLLRKLILSASSSGLIN AKL
Sbjct: 661 PSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKL 720
Query: 721 LSTISKEAADQGDLPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLE 780
LSTISKEAADQGD PNLMII +DQ+PKV RARKE QS REKLD+LIT YRKQLGMR LE
Sbjct: 721 LSTISKEAADQGDFPNLMII-YSDQYPKVARARKEAQSAREKLDALITFYRKQLGMRNLE 780
Query: 781 FVSVLGTTHLIELASDVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRD 840
F SV GTTHLIELA DVKVPS WVK+NSTKKT+RYHPP VL+ALDELSL NEELMVASRD
Sbjct: 781 FTSVSGTTHLIELAIDVKVPSKWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRD 840
Query: 841 AWDVFLSGFSSYYAEFQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSG 900
AWD FL GFS YYAEFQAAVQALASIDCLYSLAILSRN NY RPEFVHDDEP QI I SG
Sbjct: 841 AWDDFLRGFSRYYAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVHDDEPAQIHICSG 900
Query: 901 RHPVLESTLGGNFVPNDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPA 960
RHPVLE TL GNFVPNDTN++ NGEHC+IVTGPNMGGKSCYIRQVALIALM+QVGSFVPA
Sbjct: 901 RHPVLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPA 960
Query: 961 LSAKLRVLDSIYTRMGASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTH 1020
SAKL VLD IYTRMGASD+IQ GRSTFLEEMTETSHIL+HS+SRSLVIIDELGRGTSTH
Sbjct: 961 FSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTH 1020
Query: 1021 DGLAIAYAALHNLLKYKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPL 1080
DG+AIAYAALHNLL+ KKCL+LFVTHYPKVA+I KEFP YHVSYLTSH+NP+LS
Sbjct: 1021 DGVAIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQ 1080
Query: 1081 KSDHQDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSK 1140
KS +DVTYLYKLVPGVAESSFGFKVAQLAQIPLSCI RAT+MG+ L+ + RRAQ KS+
Sbjct: 1081 KST-EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSR 1140
Query: 1141 EEQPSQETSGKRLEFFLRDAGESEDAYEEFFLSLKALICAADDIEQSCQQLNRARSMAMD 1185
E P G + F + E D YEEFF+ LKA++ +AD + C Q+ +ARSMAMD
Sbjct: 1141 EHLPEISVKGLEWQSF-QSFLERIDGYEEFFIFLKAIVRSADVMGTCCHQIYQARSMAMD 1186
BLAST of MS000396 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 656/1167 (56.21%), Postives = 810/1167 (69.41%), Query Frame = 0
Query: 1 MGKQKQQVISRFFAPKPKSPSSSSSSPPSIPAPQPFSPPKISATVTFSPSKR-LLSSALA 60
MGKQKQQ ISRFFAPKPKSP+ P+ A PPKISATV+FSPSKR LLS LA
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHE----PNPVAESSTPPPKISATVSFSPSKRKLLSDHLA 60
Query: 61 SQSTPPKSSKRPKLSPHTQNPVSPLPNPSLHKRFLQKFLEPTENTLQPSNPNPKPPPGGD 120
+ S K+PKLSPHTQNPV P+P+LH+RFLQ+FLEP+ P + +
Sbjct: 61 A-----ASPKKPKLSPHTQNPV---PDPNLHQRFLQRFLEPSPEEYVPETSSSR------ 120
Query: 121 PKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAAKVLGIYAHLDHNFMTASIP 180
KYTPLE QVVELK ++PDV+LMVEVGYRYRFFGEDAEIAA+VLGIYAH+DHNFMTAS+P
Sbjct: 121 -KYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 180
Query: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQNLG 240
TFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEAA+++
Sbjct: 181 TFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDIS 240
Query: 241 ---GGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVKIGMVGIEISTGDVIYEEYSD 300
GGEEG G +SN+L CVV++ + E L C IE DV++G+VG+EISTG+V+YEE++D
Sbjct: 241 GGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFND 300
Query: 301 NFMRSGLESMLLSLSPAELLVGDPISKLTEKVYFRVTCNVVSRKKCEKLQSSFLFPCFTL 360
NFMRSGLE+++LSLSPAELL+G P+S+ TEK
Sbjct: 301 NFMRSGLEAVILSLSPAELLLGQPLSQQTEK----------------------------- 360
Query: 361 TFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAVSIYNFPNNFRHSLLLGYAGPA 420
L+ +AGP
Sbjct: 361 ---------------------------------------------------FLVAHAGPT 420
Query: 421 SNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHNPDTGFIEQKTDHLAIKEIMNL 480
SNVRVE S DCF +G+A+ EV+SL E IS NL D E+ L + IMN+
Sbjct: 421 SNVRVERASLDCFSNGNAVDEVISLCEKISAGNLEDDKEMKLEAAEKGMSCLTVHTIMNM 480
Query: 481 PDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSE 540
P L +QALALT HLKQFG ERI+ G+SFR S EM+LS NTL+QLEV+KNN DGSE
Sbjct: 481 PHLTVQALALTFCHLKQFGFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSE 540
Query: 541 TGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIEL 600
+GSL +MNHTLT++GSRL R W+THPLCDR++I AR +AVSEI+A M S SQ EL
Sbjct: 541 SGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSEL 600
Query: 601 DEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLFAGK 660
E S+ ++ PE VLSSVLT + R+ DIQRGITRIFHRTA +EFIAV++A+L AGK
Sbjct: 601 VEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGK 660
Query: 661 QLQKFNIDEEDDNYS-SASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGDLP 720
Q+Q+ I ++ + S ++ + S LLRKLI SS +++ KLLS ++KEAA +GDL
Sbjct: 661 QIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLL 720
Query: 721 NLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELAS 780
++ +I ++DQFP++ AR+ V +REKLDS I +RK+L +R LEF+ V G THLIEL
Sbjct: 721 DI-LITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPV 780
Query: 781 DVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAE 840
D KVP NWVKVNSTKKTIRYHPP +++ LDEL+L E L + +R +WD FL FS YY +
Sbjct: 781 DSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTD 840
Query: 841 FQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVP 900
F+AAVQALA++DCL+SL+ LSRN NYVRPEFV D EP +I I+SGRHPVLE+ L NFVP
Sbjct: 841 FKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVP 900
Query: 901 NDTNMNVNGEHCEIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRM 960
NDT ++ GE+C+I+TGPNMGGKSCYIRQVALI++MAQVGSFVPA AKL VLD ++TRM
Sbjct: 901 NDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRM 960
Query: 961 GASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLK 1020
GASD+IQ GRSTFLEE++E SHI++ +SRSLVI+DELGRGTSTHDG+AIAYA L +LL
Sbjct: 961 GASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLA 1020
Query: 1021 YKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVP 1080
K+CL+LFVTHYP++A+I FP SVG YHVSYLT ++ DH DVTYLYKLV
Sbjct: 1021 EKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDKG----SYDHDDVTYLYKLVR 1055
Query: 1081 GVAESSFGFKVAQLAQIPLSCIERATKMGVCLQALETRRAQRKSKEEQPSQETSGKRLEF 1140
G+ SFGFKVAQLAQIP SCI RA M L+A E R +R ++ +P
Sbjct: 1081 GLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEA-EVRARERNTRMGEPEGHEEP----- 1055
Query: 1141 FLRDAGESEDAYEEFFLSLKALICAAD 1163
R A ES A + F LK + D
Sbjct: 1141 --RGAEESISALGDLFADLKFALSEED 1055
BLAST of MS000396 vs. TAIR 10
Match:
AT4G02070.2 (MUTS homolog 6 )
HSP 1 Score: 233.0 bits (593), Expect = 1.2e-60
Identity = 273/1041 (26.22%), Postives = 437/1041 (41.98%), Query Frame = 0
Query: 96 KFLEPTENTLQPSNPNPKP-----PPGGDPKYTPLELQVVELKKRHPDVLLMVEVGYRYR 155
+FL +P++ N P PP K T + Q E K +H D ++ ++G Y
Sbjct: 345 RFLGVDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYE 404
Query: 156 FFGEDAEIAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKA 215
F DA + AK L I ++ P +V++ +LV GY+V VV+QTET
Sbjct: 405 LFEMDAHVGAKELDI-QYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLE 464
Query: 216 HGSNKLGP----FCRGLSALYTKATLEAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLD 275
+ G R + A+ TK TL + L +++YL + E G + N
Sbjct: 465 QRRKETGSKDKVVKREVCAVVTKGTLTDGEML-----LTNPDASYLMALTEGGESLTNPT 524
Query: 276 CRIENGVDVKIGMVGIEISTGDVIYEEYSDNFMRSGLESMLLSLSPAELL-VGDPISKLT 335
GV + ++++T +I ++ D+ S L +L + P E++ +S T
Sbjct: 525 AEHNFGVCL------VDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYAT 584
Query: 336 EKVYFRVTCNVVSRKKCEKLQSSFLFPCFTLTFGNCTLSFFFFLFLFPALLILDTVGSLS 395
E+ R T N + L P D+ ++
Sbjct: 585 ERTIVRQTRNPLVNN------------------------------LVPLSEFWDSEKTI- 644
Query: 396 FMAPMNFVAVSIYNFPNNFRHSLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENI 455
+ IY N P+S E G L +
Sbjct: 645 ------YEVGIIYKRIN----------CQPSSAYSSE---------GKILGD-------- 704
Query: 456 SQDNLADHHNPDTGFIEQKTDHLAIKEIMNLPDLALQALALTIRHLKQFGLE----RIVS 515
+ F+ + LA ++ LAL AL I +L+Q L+ R
Sbjct: 705 -----------GSSFLPKMLSELATED--KNGSLALSALGGAIYYLRQAFLDESLLRFAK 764
Query: 516 LGS----SFRPFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSLLQSMNHTLTIFGSRLFR 575
S F + K M L L+ LE+ +N+ +G +G+L +N +T G RL +
Sbjct: 765 FESLPYCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLK 824
Query: 576 QWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNIIELDEADSDVMVIEPELNYVLSSV 635
W+ PL + ++I RQ+AV+ + L Y L
Sbjct: 825 TWLARPLYNTELIKERQDAVAILRGE-------------------------NLPYSL-EF 884
Query: 636 LTTLGRTPDIQRGITRIFHR-TATPSEFIAVIQAVLFAGKQLQKFNIDEEDDNYSSASMI 695
+L R PD++R I R+F A+ V+ A KQ+Q+F + +
Sbjct: 885 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 944
Query: 696 GSKLLRKLILSASSSGLINTGAKLLSTIS-----KEAADQGDLPNL-MIINNNDQFPKVG 755
+ + K S L+ G L + S K+A D + N +I + +
Sbjct: 945 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 1004
Query: 756 RARKEVQSVREKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDV--KVPSNWVKVNS 815
A K V+ L + RK LG + +V+V +L+E+ + VP ++ +S
Sbjct: 1005 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 1064
Query: 816 TKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAVQALASIDC 875
K RY P + L ELS E A + + F + +++ V A A +D
Sbjct: 1065 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1124
Query: 876 LYSLAILSRNMNYVRPEFV----HDDEPGQIFIRSGRHPVLE-STLG-GNFVPNDTNMNV 935
L SLA S + VR V D + HPVL +LG G+FVPN N+ +
Sbjct: 1125 LISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPN--NVKI 1184
Query: 936 NGEHCE---IVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASD 995
G ++TGPNMGGKS +RQV L ++AQ+G+ VPA + ++ +D I RMGA D
Sbjct: 1185 GGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKD 1244
Query: 996 TIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKC 1055
I G+STFL E++ET+ +L +T SLV++DELGRGT+T DG AIA + L + ++ +C
Sbjct: 1245 HIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQC 1260
Query: 1056 LLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAE 1101
F THY +++ + P+ V + H++ + ++VT+LY+L PG
Sbjct: 1305 RGFFSTHYHRLSVDYQTNPK-VSLCHMAC-------QIGEGIGGVEEVTFLYRLTPGACP 1260
BLAST of MS000396 vs. TAIR 10
Match:
AT4G02070.1 (MUTS homolog 6 )
HSP 1 Score: 231.9 bits (590), Expect = 2.7e-60
Identity = 271/1031 (26.29%), Postives = 434/1031 (42.10%), Query Frame = 0
Query: 106 QPSNPNPKP-----PPGGDPKYTPLELQVVELKKRHPDVLLMVEVGYRYRFFGEDAEIAA 165
+P++ N P PP K T + Q E K +H D ++ ++G Y F DA + A
Sbjct: 358 RPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHVGA 417
Query: 166 KVLGIYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGP-- 225
K L I ++ P +V++ +LV GY+V VV+QTET + G
Sbjct: 418 KELDI-QYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKD 477
Query: 226 --FCRGLSALYTKATLEAAQNLGGGEEGCGGESNYLFCVVEKGMLVENLDCRIENGVDVK 285
R + A+ TK TL + L +++YL + E G + N GV +
Sbjct: 478 KVVKREVCAVVTKGTLTDGEML-----LTNPDASYLMALTEGGESLTNPTAEHNFGVCL- 537
Query: 286 IGMVGIEISTGDVIYEEYSDNFMRSGLESMLLSLSPAELL-VGDPISKLTEKVYFRVTCN 345
++++T +I ++ D+ S L +L + P E++ +S TE+ R T N
Sbjct: 538 -----VDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRN 597
Query: 346 VVSRKKCEKLQSSFLFPCFTLTFGNCTLSFFFFLFLFPALLILDTVGSLSFMAPMNFVAV 405
+ L P D+ ++ +
Sbjct: 598 PLVNN------------------------------LVPLSEFWDSEKTI-------YEVG 657
Query: 406 SIYNFPNNFRHSLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENISQDNLADHHN 465
IY N P+S E G L +
Sbjct: 658 IIYKRIN----------CQPSSAYSSE---------GKILGD------------------ 717
Query: 466 PDTGFIEQKTDHLAIKEIMNLPDLALQALALTIRHLKQFGLE----RIVSLGS----SFR 525
+ F+ + LA ++ LAL AL I +L+Q L+ R S F
Sbjct: 718 -GSSFLPKMLSELATED--KNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFS 777
Query: 526 PFSCKVEMSLSGNTLKQLEVLKNNDDGSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDR 585
+ K M L L+ LE+ +N+ +G +G+L +N +T G RL + W+ PL +
Sbjct: 778 NVNEKQHMVLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNT 837
Query: 586 DMIIARQEAVSEIAASMASSKVSQNIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDI 645
++I RQ+AV+ + L Y L +L R PD+
Sbjct: 838 ELIKERQDAVAILRGE-------------------------NLPYSL-EFRKSLSRLPDM 897
Query: 646 QRGITRIFHR-TATPSEFIAVIQAVLFAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLIL 705
+R I R+F A+ V+ A KQ+Q+F + + + + K
Sbjct: 898 ERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDT 957
Query: 706 SASSSGLINTGAKLLSTIS-----KEAADQGDLPNL-MIINNNDQFPKVGRARKEVQSVR 765
S L+ G L + S K+A D + N +I + + A K V+
Sbjct: 958 SRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFE 1017
Query: 766 EKLDSLITLYRKQLGMRKLEFVSVLGTTHLIELASDV--KVPSNWVKVNSTKKTIRYHPP 825
L + RK LG + +V+V +L+E+ + VP ++ +S K RY P
Sbjct: 1018 SSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTP 1077
Query: 826 AVLSALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAVQALASIDCLYSLAILSRN 885
+ L ELS E A + + F + +++ V A A +D L SLA S +
Sbjct: 1078 TIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDS 1137
Query: 886 MNYVRPEFV----HDDEPGQIFIRSGRHPVLE-STLG-GNFVPNDTNMNVNGEHCE---I 945
VR V D + HPVL +LG G+FVPN N+ + G +
Sbjct: 1138 YEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPN--NVKIGGAEKASFIL 1197
Query: 946 VTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDTIQLGRSTFL 1005
+TGPNMGGKS +RQV L ++AQ+G+ VPA + ++ +D I RMGA D I G+STFL
Sbjct: 1198 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFL 1257
Query: 1006 EEMTETSHILQHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCLLLFVTHYPK 1065
E++ET+ +L +T SLV++DELGRGT+T DG AIA + L + ++ +C F THY +
Sbjct: 1258 TELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHR 1263
Query: 1066 VADIVKEFPRSVGVYHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAESSFGFKVAQL 1101
++ + P+ V + H++ + ++VT+LY+L PG S+G VA+L
Sbjct: 1318 LSVDYQTNPK-VSLCHMAC-------QIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARL 1263
BLAST of MS000396 vs. TAIR 10
Match:
AT3G18524.1 (MUTS homolog 2 )
HSP 1 Score: 203.0 bits (515), Expect = 1.3e-51
Identity = 177/655 (27.02%), Postives = 302/655 (46.11%), Query Frame = 0
Query: 515 MSLSGNTLKQLEVLKNNDDGSETGSLLQSMNHTLTI-FGSRLFRQWITHPLCDRDMIIAR 574
M L ++ L V+++ D ++ SL MN T T G RL W+ PL D + I R
Sbjct: 294 MRLDSAAMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTR 353
Query: 575 QEAVSEIAASMASSKVSQNIIELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITR 634
+ V Q +E D+ L R D++R +
Sbjct: 354 LDIV-------------QCFVEEAGLRQDLR--------------QHLKRISDVERLLRS 413
Query: 635 IFHRTATPSEFIAVIQAVL---FAGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASS 694
+ R I + Q+ + F +Q++ + AS+I + L+KL +
Sbjct: 414 LERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE-------FASLISERYLKKLEALSDQ 473
Query: 695 SGLINTGAKLLSTISKEAADQGDLPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLY 754
L K + + + + D L N + ++ K+ + + + + +++ L
Sbjct: 474 DHL----GKFIDLV-ECSVDLDQLENGEYMISSSYDTKLASLKDQKELLEQQIHELHKKT 533
Query: 755 RKQLGMR-----KLEFVSVLGTTHLIELASDVKV----PSNWVKVNSTKKTIRYHPPAVL 814
+L ++ KL+ + G I + K+ + ++ + + K +++ +
Sbjct: 534 AIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 593
Query: 815 SALDELSLVNEELMVASRDAWDVFLSGFSSYYAEFQAAVQALASIDCLYSLAILSRN--M 874
D+ V ++ ++ D + +S+ F+ L+ +D L S A L+ +
Sbjct: 594 KLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPT 653
Query: 875 NYVRPEFVHDDEPGQIFIRSGRHPVLESTLGGNFVPNDTNMNVNGEHCEIVTGPNMGGKS 934
Y RPE D G I + RHP +E+ NF+PND + +IVTGPNMGGKS
Sbjct: 654 PYCRPEITSSD-AGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKS 713
Query: 935 CYIRQVALIALMAQVGSFVPALSAKLRVLDSIYTRMGASDTIQLGRSTFLEEMTETSHIL 994
+IRQV +I LMAQVGSFVP A + + D I+ R+GA D G STF++EM ET+ IL
Sbjct: 714 TFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 773
Query: 995 QHSTSRSLVIIDELGRGTSTHDGLAIAYAALHNLLKYKKCLLLFVTHYPKVADIVKE--- 1054
+ ++ +SL+IIDELGRGTST+DG +A+A +L++ K+ LF TH+ ++ + +
Sbjct: 774 KGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSE 833
Query: 1055 -FPRSVGV--YHVSYLTSHQNPTLSPLKSDHQDVTYLYKLVPGVAESSFGFKVAQLAQIP 1114
+VGV +HVS + + ++ + +T LYK+ PG + SFG VA+ A P
Sbjct: 834 VSGNTVGVANFHVS----------AHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFP 893
Query: 1115 LSCIERATKMGVCLQAL--------ETRRAQRKSKEEQPSQETSG-KRLEFFLRD 1140
S + A + L+ +RKS+E+ P + + G +R FL++
Sbjct: 894 ESVVALAREKAAELEDFSPSSMIINNEESGKRKSREDDPDEVSRGAERAHKFLKE 898
BLAST of MS000396 vs. TAIR 10
Match:
AT3G24495.1 (MUTS homolog 7 )
HSP 1 Score: 184.5 bits (467), Expect = 5.0e-46
Identity = 182/641 (28.39%), Postives = 275/641 (42.90%), Query Frame = 0
Query: 474 MNLPDLALQALALTIRHLKQFGLERIVSLGSSFRPFSCKVEMSLSGNTLKQLEVLKNNDD 533
+N D+AL AL I HL + LE ++ G F + + + G T+ LE+ N+ D
Sbjct: 512 LNECDVALSALGELINHLSRLKLEDVLKHGDIFPYQVYRGCLRIDGQTMVNLEIFNNSCD 571
Query: 534 GSETGSLLQSMNHTLTIFGSRLFRQWITHPLCDRDMIIARQEAVSEIAASMASSKVSQNI 593
G +G+L + +++ ++ G RL R WI HPL D + I R + V E A+ S +++
Sbjct: 572 GGPSGTLYKYLDNCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQITGQY 631
Query: 594 IELDEADSDVMVIEPELNYVLSSVLTTLGRTPDIQRGITRIFHRTATPSEFIAVIQAVLF 653
L + PD++R + RI ++ +V+ A+L
Sbjct: 632 ---------------------------LHKLPDLERLLGRI---KSSVRSSASVLPALL- 691
Query: 654 AGKQLQKFNIDEEDDNYSSASMIGSKLLRKLILSASSSGLINTGAKLLSTISKEAADQGD 713
GK++ K + K +++ +G LL + KE+
Sbjct: 692 -GKKVLKQRV---------------KAFGQIVKG------FRSGIDLLLALQKES----- 751
Query: 714 LPNLMIINNNDQFPKVGRARKEVQSVREKLDSLITLYRKQLGMRKLE-FVSVLGTTHLIE 773
N+M S+ KL L L +G LE F+S E
Sbjct: 752 --NMM-------------------SLLYKLCKLPIL----VGKSGLELFLS------QFE 811
Query: 774 LASDVKVPSNWVKVNSTKKTIRYHPPAVLSALDELSLVNEELMVASRDAWDVFLSGFSSY 833
A D P+ Y V E + EL + W + S
Sbjct: 812 AAIDSDFPN-------------YQNQDVTDENAETLTILIELFIERATQWSEVIHTIS-- 871
Query: 834 YAEFQAAVQALASIDCLYSLAILSRNMNYVRPEFVHDDE----PGQIF-IRSGRHPVLES 893
+ L S SL+ S + PE D+ G I I+ HP +
Sbjct: 872 ------CLDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVA 931
Query: 894 TLGGNFVPND-----TNMNVNGEHCE--IVTGPNMGGKSCYIRQVALIALMAQVGSFVPA 953
G VPND + H ++TGPNMGGKS +R L + AQ+G +VP
Sbjct: 932 ADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPC 991
Query: 954 LSAKLRVLDSIYTRMGASDTIQLGRSTFLEEMTETSHILQHSTSRSLVIIDELGRGTSTH 1013
S ++ ++D+I+TR+GASD I G STFL E TET+ +LQ++T SLVI+DELGRGTST
Sbjct: 992 ESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTF 1039
Query: 1014 DGLAIAYAALHNLLKYKKCLLLFVTHYPKVADIVKEFPRSVGVYHVSYLTSHQNPTLSPL 1073
DG AIAY+ +L++ +C +LF THY + PR + S + P
Sbjct: 1052 DGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSD--YQPR 1039
Query: 1074 KSDHQDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIERAT 1102
D QD+ +LY+L G S+G +VA +A IP +E A+
Sbjct: 1112 GCD-QDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETAS 1039
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140856.1 | 0.0e+00 | 93.07 | DNA mismatch repair protein MSH3 isoform X1 [Momordica charantia] | [more] |
XP_022140857.1 | 0.0e+00 | 93.07 | DNA mismatch repair protein MSH3 isoform X2 [Momordica charantia] | [more] |
KAG6576729.1 | 0.0e+00 | 79.73 | DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
KAG7014774.1 | 0.0e+00 | 78.49 | DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
XP_022923129.1 | 0.0e+00 | 79.01 | DNA mismatch repair protein MSH3 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
O65607 | 0.0e+00 | 56.21 | DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV... | [more] |
P20585 | 1.1e-159 | 35.62 | DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4 | [more] |
P13705 | 2.7e-158 | 34.98 | DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3 | [more] |
Q1ZXH0 | 1.8e-146 | 33.62 | DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum OX=44689 GN=msh3 PE... | [more] |
B0YCF6 | 1.4e-141 | 33.52 | DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain CEA10 / CBS 144... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CI92 | 0.0e+00 | 93.07 | DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 ... | [more] |
A0A6J1CHA4 | 0.0e+00 | 93.07 | DNA mismatch repair protein OS=Momordica charantia OX=3673 GN=LOC111011425 PE=3 ... | [more] |
A0A6J1E5H0 | 0.0e+00 | 79.01 | DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111430887 PE=3 S... | [more] |
A0A6J1J5R3 | 0.0e+00 | 78.42 | DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111482846 PE=3 SV=... | [more] |
A0A5A7SWU6 | 0.0e+00 | 76.25 | DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |