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MS000331 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTACAAATAATCCCCCACTCTCCCTCTTCTTTCACCAGGCAACCCTATCGCCTTCCCACCACACCTCTTCAATTTCCCTCAAAACGTAATTTCGTCATCAAATCACAGAATTCGTCGGAGTCGGAGTCGGAGAAGCTCATTTCGAAGGTTGTTGATGATGCTTCAGTTGCGACGTCATCCAAGGCGTCGAGCTCATCTGCTCAAGGTTTTGGTTCTTCACCGACTCAATCAACAAGCAAATTGAGTCCGAAAGCCACTCCTTCTAAGGGGAAGCAGAAGGGCAAGCGGCAGAGGGCATCGATTATTCGGCGTTCGCCGGTGGAGAAACCGGTGTTTGTTGGACAGGTAGATGAAGAGGCGGCTAAGGAGCAGGGCAGGAATGAGAGCTATTTTCTTCTTACTTGGTTGGGTCTTGGTGCTGTGATCCTCGTCGAGGGCATTGTGCTCGCGGCATCCGGTACGAGCTCTTGAACTTCGTAATTGTGTTTTGTTAAAATTGATGTTGCAGTTTCCAAGTTCGATGGGGGCATCTTCTCTTTCTTGCCTGGGTTTCGTGTAAATAATTTGTTTGTCTGAGATGTGGTAGTTGTCAAAATACGATTCAAGTCGGATTTTTTTCACTAGGACGTGGAAGAAGTCTGAAACCGAATTTCGAACATTAGGCGAGCTTTGGAGGAATTTCTAGTTGGGTAAGGTGGTGGGTTGAAACTTTTGTCTGGTTATTGGAATTTCATTAGAGTGAAAAAATTGAAAACGTGAAACAGTTGACTTATGAAATGAAGAATATTATAATCTAGGCCCCCTTCATTTCGTGTTGTGAGTGGCAATGGTATTTCTTCAATAGTTCTCAGTCTCGAAGTTCATATTTGAAGAATAAAAATAAGGCAAATTTTCATAATCATTTATGACTAAGGTAATGTGATGCACATAGTTCTGCTAGTGAAGGATGTAAGACGAGTGTGGATCTACAGTGATGTTCTCATTGTACAGGTGTTTGGTGGGGTAAGAGTTCTGTTACTTTCTTTTGGTGATGTTCTCCAGTCGTTGTATATATATTCTTCAGTGAAAGAAAGCTGAACTTTAACAGTGGATTAGATTCTCCTTGTCCTCCTCTCCCCTGGCATGTCAATGCATGTACTGGGATAGCATCAATTTGATGGTTGATTTGGTTTTCCTGTACCAACAACTTATTGCAGGCTCTAGATTTTTTCCCCTAACAAATATATTGCATAAATATTTTACAGTGATAATTTATAAGAGATTGTAATTAATATGTAAAAAACAGCATAGTTTGGTGTACAATCTTCCAATCGAAATAAGTTGCTTATGTTTTTGCTGGCCTTGTATTCCGAAGTTTTTTAAATGTAAGGTTAATTCCATCTGGAAGACCCTGAACTACTCTTGTTTAGAAGCATGTTTGCTATGTGCCGTTAGAATTTGCCCAAGTTACTGCTCATTTATATTTAACATCTTTCACTGTTTCATTGGAATGGGAATCCAATTATTCAACATAATATGCTGTTATTCAAATATGCTTTTATGGGTTGAGGGAGGTTCCTTTTGACGCGGTTTTTCTTTGTGGTTCTTCTAACACGAAAGAAATAGGTCTTCCGAGGATAGCAGTGTTTCAGGGAAGGAGGTTGTGATGCTTTCCTTTGGGCTTCTACTTTTGTCGTTAGAAATGTTCTTCTTTTCGGATTTTAGATAGGTTCTCAGTTGGATCGTTGTTCTTCTGAAATTTTTCCTCTAATGAATGGTTTGGCAGAATATCTTCCCGGCATTGACTTCCATTTGATATCCTTAAACCTAATGTAGCTGGATAAGAACAAATAACGCAGGTCTTGATATGCAATTGAGGCTAATTGATTACGACTTTGAAATTTAGGATTCTAGGGTTCAACAAACAAATGTGCTTTCAATGAGAGTTATAAGATGGCACATCCAATCCTACTTTCCAAATGCCAAATGAGACTTGTGGACTGGATTGTTTTTCTTGGAGAAACAGAGTTACATTGCGGTTAAGAGTTGGTGCTGTACCTTCTTTGGTTCGTTTAGTGGATCTTTTGTATCTCAGGAGAAGAGAATGAGGTCGGGCAATCTCCATTTTGTTATCTAAGAAGTTCTAGTTGTTCAAAGCCTGTTCTTTAGCTATGGTTTTTTTCGGAAAACCATTATTTTGGAACTTTATTGATTAAAATCTTTTGTTAGAGTTCAATGGTTTGACACTTTGGATTTTTTTCTTGCGATTTCAAAATATACAACATACCTCATTTGCTGTTGATTCTACCATCAAACTAATGGAAAGTAATAGCTCTTATCTTTCATAGTTTATGTCGGGACTTCTTTTTTTCTATTTCTTATACTATTTGAATTCTTTGATGCCTCTAAATATGGGAAGAAACATACTCTCATGATTTTATTTGACTGGAATGAATATACACTTAGTCTGTGTTACAAATTCAATGTCCGATTTCTTTCATAAGTGCAATATTCATAGTCCATGCTTCAACTTCACTTTGATTCACTGCAACTATAATTGTTAATATGTCGTGTGCATCTTCAGGTTTCTTACCGGAAGAGTGGGATAAGTTCCTTGTCAAATATTTGTATCCATCCTTTACACCAACCGTTTCTCTGTTTGTTGCTGGAACTGTTGCATATGGAGTTTTGAAGTATCTTCAGAACGAGAAAACTAAAGGTGAGAAATCA ATGGCGCTACAAATAATCCCCCACTCTCCCTCTTCTTTCACCAGGCAACCCTATCGCCTTCCCACCACACCTCTTCAATTTCCCTCAAAACGTAATTTCGTCATCAAATCACAGAATTCGTCGGAGTCGGAGTCGGAGAAGCTCATTTCGAAGGTTGTTGATGATGCTTCAGTTGCGACGTCATCCAAGGCGTCGAGCTCATCTGCTCAAGGTTTTGGTTCTTCACCGACTCAATCAACAAGCAAATTGAGTCCGAAAGCCACTCCTTCTAAGGGGAAGCAGAAGGGCAAGCGGCAGAGGGCATCGATTATTCGGCGTTCGCCGGTGGAGAAACCGGTGTTTGTTGGACAGGTAGATGAAGAGGCGGCTAAGGAGCAGGGCAGGAATGAGAGCTATTTTCTTCTTACTTGGTTGGGTCTTGGTGCTGTGATCCTCGTCGAGGGCATTGTGCTCGCGGCATCCGGTTTCTTACCGGAAGAGTGGGATAAGTTCCTTGTCAAATATTTGTATCCATCCTTTACACCAACCGTTTCTCTGTTTGTTGCTGGAACTGTTGCATATGGAGTTTTGAAGTATCTTCAGAACGAGAAAACTAAAGGTGAGAAATCA ATGGCGCTACAAATAATCCCCCACTCTCCCTCTTCTTTCACCAGGCAACCCTATCGCCTTCCCACCACACCTCTTCAATTTCCCTCAAAACGTAATTTCGTCATCAAATCACAGAATTCGTCGGAGTCGGAGTCGGAGAAGCTCATTTCGAAGGTTGTTGATGATGCTTCAGTTGCGACGTCATCCAAGGCGTCGAGCTCATCTGCTCAAGGTTTTGGTTCTTCACCGACTCAATCAACAAGCAAATTGAGTCCGAAAGCCACTCCTTCTAAGGGGAAGCAGAAGGGCAAGCGGCAGAGGGCATCGATTATTCGGCGTTCGCCGGTGGAGAAACCGGTGTTTGTTGGACAGGTAGATGAAGAGGCGGCTAAGGAGCAGGGCAGGAATGAGAGCTATTTTCTTCTTACTTGGTTGGGTCTTGGTGCTGTGATCCTCGTCGAGGGCATTGTGCTCGCGGCATCCGGTTTCTTACCGGAAGAGTGGGATAAGTTCCTTGTCAAATATTTGTATCCATCCTTTACACCAACCGTTTCTCTGTTTGTTGCTGGAACTGTTGCATATGGAGTTTTGAAGTATCTTCAGAACGAGAAAACTAAAGGTGAGAAATCA MALQIIPHSPSSFTRQPYRLPTTPLQFPSKRNFVIKSQNSSESESEKLISKVVDDASVATSSKASSSSAQGFGSSPTQSTSKLSPKATPSKGKQKGKRQRASIIRRSPVEKPVFVGQVDEEAAKEQGRNESYFLLTWLGLGAVILVEGIVLAASGFLPEEWDKFLVKYLYPSFTPTVSLFVAGTVAYGVLKYLQNEKTKGEKS Homology
BLAST of MS000331 vs. NCBI nr
Match: XP_022140851.1 (protein LOW PSII ACCUMULATION 2, chloroplastic [Momordica charantia]) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of MS000331 vs. NCBI nr
Match: XP_023554492.1 (protein LOW PSII ACCUMULATION 2, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301.6 bits (771), Expect = 5.1e-78 Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0
BLAST of MS000331 vs. NCBI nr
Match: XP_022973018.1 (protein LOW PSII ACCUMULATION 2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 300.8 bits (769), Expect = 8.7e-78 Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0
BLAST of MS000331 vs. NCBI nr
Match: XP_022941727.1 (protein LOW PSII ACCUMULATION 2, chloroplastic [Cucurbita moschata] >KAG7030828.1 Protein LOW PSII ACCUMULATION 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77 Identity = 168/205 (81.95%), Postives = 175/205 (85.37%), Query Frame = 0
BLAST of MS000331 vs. NCBI nr
Match: XP_038899637.1 (protein LOW PSII ACCUMULATION 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 295.4 bits (755), Expect = 3.7e-76 Identity = 169/205 (82.44%), Postives = 175/205 (85.37%), Query Frame = 0
BLAST of MS000331 vs. ExPASy Swiss-Prot
Match: F4KDA6 (Protein LPA2 OS=Arabidopsis thaliana OX=3702 GN=LPA2 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42 Identity = 112/204 (54.90%), Postives = 137/204 (67.16%), Query Frame = 0
BLAST of MS000331 vs. ExPASy TrEMBL
Match: A0A6J1CH98 (protein LOW PSII ACCUMULATION 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011420 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 7.9e-101 Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of MS000331 vs. ExPASy TrEMBL
Match: A0A6J1IBT8 (protein LOW PSII ACCUMULATION 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471505 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 4.2e-78 Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0
BLAST of MS000331 vs. ExPASy TrEMBL
Match: A0A6J1FNA7 (protein LOW PSII ACCUMULATION 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447004 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77 Identity = 168/205 (81.95%), Postives = 175/205 (85.37%), Query Frame = 0
BLAST of MS000331 vs. ExPASy TrEMBL
Match: A0A1S3AXX6 (protein LOW PSII ACCUMULATION 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483996 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74 Identity = 160/203 (78.82%), Postives = 172/203 (84.73%), Query Frame = 0
BLAST of MS000331 vs. ExPASy TrEMBL
Match: A0A5A7VJY0 (Protein LOW PSII ACCUMULATION 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00540 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.7e-74 Identity = 159/203 (78.33%), Postives = 172/203 (84.73%), Query Frame = 0
BLAST of MS000331 vs. TAIR 10
Match: AT5G51545.1 (low psii accumulation2 ) HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43 Identity = 112/204 (54.90%), Postives = 137/204 (67.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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