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MS000304 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCCAACCAAGCGGTCGTGAGTTCGATCCTTAGTTTATCAGTCTGGGCGTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCTAATTTGATTCGATGGAGAGATAAACCTGTGGCTCTTTCCATTGTCCAAGCAAGATTAGTTGGATTAGCCCACTTTTCTGTAGGTTATATATTTACTTATGCGGCTTTCTTGATTGCCTCTACATCAGGCAAATTT TCCAACCAAGCGGTCGTGAGTTCGATCCTTAGTTTATCAGTCTGGGCGTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCTAATTTGATTCGATGGAGAGATAAACCTGTGGCTCTTTCCATTGTCCAAGCAAGATTAGTTGGATTAGCCCACTTTTCTGTAGGTTATATATTTACTTATGCGGCTTTCTTGATTGCCTCTACATCAGGCAAATTT TCCAACCAAGCGGTCGTGAGTTCGATCCTTAGTTTATCAGTCTGGGCGTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCTAATTTGATTCGATGGAGAGATAAACCTGTGGCTCTTTCCATTGTCCAAGCAAGATTAGTTGGATTAGCCCACTTTTCTGTAGGTTATATATTTACTTATGCGGCTTTCTTGATTGCCTCTACATCAGGCAAATTT SNQAVVSSILSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKF Homology
BLAST of MS000304 vs. NCBI nr
Match: YP_009945416.1 (photosystem I P700 apoprotein A2 [Sechium edule] >QOE55946.1 photosystem I P700 apoprotein A2 [Sechium edule]) HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. NCBI nr
Match: YP_009557859.1 (photosystem I P700 chlorophyll a apoprotein A2 [Zelkova serrata] >YP_009560293.1 photosystem I P700 apoprotein A2 [Zelkova schneideriana] >YP_009686849.1 PsaB [Ulmus americana] >YP_009733085.1 photosystem I P700 apoprotein A2 [Ulmus elongata] >QWC54688.1 photosystem I P700 apoprotein A2 [Zelkova sinica] >QWK48211.1 photosystem I P700 apoprotein A2 [Ulmus alata] >QWK48820.1 photosystem I P700 apoprotein A2 [Ulmus crassifolia] >QWK49514.1 photosystem I P700 apoprotein A2 [Ulmus laevis] >QWK50294.1 photosystem I P700 apoprotein A2 [Ulmus rubra] >QWK50381.1 photosystem I P700 apoprotein A2 [Ulmus serotina] >QWK50554.1 photosystem I P700 apoprotein A2 [Ulmus thomasii] >QWK50813.1 photosystem I P700 apoprotein A2 [Zelkova abelicea] >QWK50900.1 photosystem I P700 apoprotein A2 [Zelkova carpinifolia]) HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. NCBI nr
Match: QBK38981.1 (photosystem I P700 chlorophyll a apoprotein A2 [Schima superba]) HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. NCBI nr
Match: YP_009378675.1 (photosystem I P700 apoprotein A2 [Actinidia arguta] >YP_009968532.1 photosystem I P700 apoprotein A2 [Actinidia macrosperma] >ARI43529.1 photosystem I P700 apoprotein A2 [Actinidia arguta] >QMX77734.1 photosystem I P700 apoprotein A2 [Actinidia macrosperma]) HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. NCBI nr
Match: ATV97015.1 (photosystem I P700 apoprotein A2 [Eschweilera wachenheimii] >ATV98377.1 photosystem I P700 apoprotein A2 [Eschweilera pittieri]) HSP 1 Score: 190.3 bits (482), Expect = 8.4e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy Swiss-Prot
Match: A1EA07 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Agrostis stolonifera OX=63632 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy Swiss-Prot
Match: Q70Y04 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amborella trichopoda OX=13333 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy Swiss-Prot
Match: Q33332 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Antirrhinum majus OX=4151 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy Swiss-Prot
Match: Q8S8X5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy Swiss-Prot
Match: A6MM35 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Buxus microphylla OX=153571 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy TrEMBL
Match: A0A1P8J737 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Juglans mandshurica OX=91218 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy TrEMBL
Match: A0A0F6PZB7 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Prunus subhirtella var. subhirtella OX=140660 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy TrEMBL
Match: A0A1Y0AK10 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Andropogon fastigiatus OX=330559 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy TrEMBL
Match: A0A172W3V9 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Helianthus annuus OX=4232 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. ExPASy TrEMBL
Match: A0A482BWJ1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Solanum megistacrolobum OX=445678 GN=psaB PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 189.1 bits (479), Expect = 1.7e-48 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of MS000304 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 78.6 bits (192), Expect = 3.3e-15 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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