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MS000299 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCCACAAAAGCTTTACTTTCAAAATGGCTATGGCGATTAATTTTTGAGAAAGACAGTCTCTGGTGCAGGTTTATTATGGCTAAATATTCATCTCACCACCCTAGCGCGACACCATCCTTTTGCAATCACCTTGGACTCATATCGTTAAATGCTCTCATCGCCTAAGTCGTAGTTCATTAAAATGGTCTATCGGAAATGGCAAAGATACTTTCTTTTGGTACCACAATTGGACTGATTTAGGTCCTCTTTATCTTGCACAGCTTCGTTTCTACGCACTCTCCACCAAAAAATCTATGTCTGTTTTTGAAGCTTGGGAT TCCACAAAAGCTTTACTTTCAAAATGGCTATGGCGATTAATTTTTGAGAAAGACAGTCTCTGGTGCAGGTTTATTATGGCTAAATATTCATCTCACCACCCTAGCGCGACACCATCCCAATCACCTTGGACTCATATCGTTAAATGCTCTCATCGCCTAAGTCGTAGTTCATTAAAATGGTCTATCGGAAATGGCAAAGATACTTTCTTTTGGTACCACAATTGGACTGATTTAGGTCCTCTTTATCTTGCACAGCTTCGTTTCTACGCACTCTCCACCAAAAAATCTATGTCTGTTTTTGAAGCTTGGGAT TCCACAAAAGCTTTACTTTCAAAATGGCTATGGCGATTAATTTTTGAGAAAGACAGTCTCTGGTGCAGGTTTATTATGGCTAAATATTCATCTCACCACCCTAGCGCGACACCATCCCAATCACCTTGGACTCATATCGTTAAATGCTCTCATCGCCTAAGTCGTAGTTCATTAAAATGGTCTATCGGAAATGGCAAAGATACTTTCTTTTGGTACCACAATTGGACTGATTTAGGTCCTCTTTATCTTGCACAGCTTCGTTTCTACGCACTCTCCACCAAAAAATCTATGTCTGTTTTTGAAGCTTGGGAT STKALLSKWLWRLIFEKDSLWCRFIMAKYSSHHPSATPSQSPWTHIVKCSHRLSRSSLKWSIGNGKDTFFWYHNWTDLGPLYLAQLRFYALSTKKSMSVFEAWD Homology
BLAST of MS000299 vs. NCBI nr
Match: TYK11012.1 (uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 87.4 bits (215), Expect = 7.8e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. NCBI nr
Match: KAA0058980.1 (uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa]) HSP 1 Score: 87.4 bits (215), Expect = 7.8e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 2.3e-13 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of MS000299 vs. NCBI nr
Match: TYK03140.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 5.0e-13 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of MS000299 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.8e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. ExPASy TrEMBL
Match: A0A5D3CI86 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00540 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.8e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.4e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MS000299 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of MS000299 vs. ExPASy TrEMBL
Match: A0A5D3BVM7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00150 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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