![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS000282 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGGGAGTTATATTAAAGATCTCGGTCGGTATAGCCAAAGGGTTGGATCATCTCCACACTGGCCTGCAAAAGCCAATAATCCATGGGAATCTACAGTCGAAGAATGTTCTTTTGGATCGAAACTTCGAACCGTATGTCTCCGATTTCGGCCTGCATCTACTGTTGAATTCCCCTTCTGCTCAAGAGGTA TGGGGAGTTATATTAAAGATCTCGGTCGGTATAGCCAAAGGGTTGGATCATCTCCACACTGGCCTGCAAAAGCCAATAATCCATGGGAATCTACAGTCGAAGAATGTTCTTTTGGATCGAAACTTCGAACCGTATGTCTCCGATTTCGGCCTGCATCTACTGTTGAATTCCCCTTCTGCTCAAGAGGTA TGGGGAGTTATATTAAAGATCTCGGTCGGTATAGCCAAAGGGTTGGATCATCTCCACACTGGCCTGCAAAAGCCAATAATCCATGGGAATCTACAGTCGAAGAATGTTCTTTTGGATCGAAACTTCGAACCGTATGTCTCCGATTTCGGCCTGCATCTACTGTTGAATTCCCCTTCTGCTCAAGAGGTA WGVILKISVGIAKGLDHLHTGLQKPIIHGNLQSKNVLLDRNFEPYVSDFGLHLLLNSPSAQEV Homology
BLAST of MS000282 vs. NCBI nr
Match: XP_022140837.1 (putative kinase-like protein TMKL1 [Momordica charantia]) HSP 1 Score: 131.3 bits (329), Expect = 2.8e-27 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MS000282 vs. NCBI nr
Match: XP_038881903.1 (putative kinase-like protein TMKL1 [Benincasa hispida]) HSP 1 Score: 126.7 bits (317), Expect = 7.0e-26 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MS000282 vs. NCBI nr
Match: XP_008453881.1 (PREDICTED: putative kinase-like protein TMKL1 [Cucumis melo] >KAA0044668.1 putative kinase-like protein TMKL1 [Cucumis melo var. makuwa] >TYK16914.1 putative kinase-like protein TMKL1 [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 4.5e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. NCBI nr
Match: XP_023553461.1 (putative kinase-like protein TMKL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.0 bits (310), Expect = 4.5e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. NCBI nr
Match: XP_004146910.1 (putative kinase-like protein TMKL1 [Cucumis sativus] >KGN53161.1 hypothetical protein Csa_015214 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 4.5e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. ExPASy Swiss-Prot
Match: Q9LJM4 (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.3e-10 Identity = 26/61 (42.62%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of MS000282 vs. ExPASy Swiss-Prot
Match: Q6NKZ9 (Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-10 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS000282 vs. ExPASy Swiss-Prot
Match: P33543 (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana OX=3702 GN=TMKL1 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-10 Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of MS000282 vs. ExPASy Swiss-Prot
Match: Q3EDL4 (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-10 Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of MS000282 vs. ExPASy Swiss-Prot
Match: Q9LX66 (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.6e-09 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of MS000282 vs. ExPASy TrEMBL
Match: A0A6J1CI76 (putative kinase-like protein TMKL1 OS=Momordica charantia OX=3673 GN=LOC111011407 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MS000282 vs. ExPASy TrEMBL
Match: A0A5D3D101 (Putative kinase-like protein TMKL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00500 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. ExPASy TrEMBL
Match: A0A0A0KZ69 (Nodulation receptor kinase OS=Cucumis sativus OX=3659 GN=Csa_4G022965 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. ExPASy TrEMBL
Match: A0A1S3BXA5 (putative kinase-like protein TMKL1 OS=Cucumis melo OX=3656 GN=LOC103494468 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. ExPASy TrEMBL
Match: A0A6J1J8A3 (putative kinase-like protein TMKL1 OS=Cucurbita maxima OX=3661 GN=LOC111483478 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.9e-25 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MS000282 vs. TAIR 10
Match: AT5G61570.1 (Protein kinase superfamily protein ) HSP 1 Score: 102.8 bits (255), Expect = 1.0e-22 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of MS000282 vs. TAIR 10
Match: AT5G61570.2 (Protein kinase superfamily protein ) HSP 1 Score: 102.8 bits (255), Expect = 1.0e-22 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of MS000282 vs. TAIR 10
Match: AT5G07620.1 (Protein kinase superfamily protein ) HSP 1 Score: 98.6 bits (244), Expect = 1.9e-21 Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of MS000282 vs. TAIR 10
Match: AT2G18890.1 (Protein kinase superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.3e-11 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of MS000282 vs. TAIR 10
Match: AT2G18890.2 (Protein kinase superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.3e-11 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|