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MS000269 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACCGATCGGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCGGTCGTCCCCGGCGCTGGTGCTGTCCTCCAAGCCCGATCAGGCATTGCGATTGTCGTCGTCGTTTGGCGCTAATGAGCTGCCGACGAACGATCCCGTCGCTGTGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTGCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGGTAAG ATGTACCGATCGGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCGGTCGTCCCCGGCGCTGGTGCTGTCCTCCAAGCCCGATCAGGCATTGCGATTGTCGTCGTCGTTTGGCGCTAATGAGCTGCCGACGAACGATCCCGTCGCTGTGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTGCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGGTAAG ATGTACCGATCGGTGAGCTGGAACCGATTCTCCGACGAATACTACTCGCGGTCGTCCCCGGCGCTGGTGCTGTCCTCCAAGCCCGATCAGGCATTGCGATTGTCGTCGTCGTTTGGCGCTAATGAGCTGCCGACGAACGATCCCGTCGCTGTGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTGCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGGTAAG MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALRLSSSFGANELPTNDPVAVMVKREKARVKFAETAVHVIPLVLLLCAIVLWFFSNPGK Homology
BLAST of MS000269 vs. NCBI nr
Match: XP_022140816.1 (uncharacterized protein LOC111011394 isoform X2 [Momordica charantia]) HSP 1 Score: 174.5 bits (441), Expect = 4.1e-40 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of MS000269 vs. NCBI nr
Match: XP_022140815.1 (uncharacterized protein LOC111011394 isoform X1 [Momordica charantia]) HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of MS000269 vs. NCBI nr
Match: XP_011653100.1 (uncharacterized protein LOC105435175 [Cucumis sativus] >KGN53176.1 hypothetical protein Csa_015195 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 0
BLAST of MS000269 vs. NCBI nr
Match: KAA0044682.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK16901.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 137.1 bits (344), Expect = 7.3e-29 Identity = 72/91 (79.12%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of MS000269 vs. NCBI nr
Match: XP_022986879.1 (uncharacterized protein LOC111484483 [Cucurbita maxima]) HSP 1 Score: 134.4 bits (337), Expect = 4.7e-28 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of MS000269 vs. ExPASy TrEMBL
Match: A0A6J1CH63 (uncharacterized protein LOC111011394 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011394 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of MS000269 vs. ExPASy TrEMBL
Match: A0A6J1CG79 (uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011394 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.4e-39 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of MS000269 vs. ExPASy TrEMBL
Match: A0A0A0KZ80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.5e-30 Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = 0
BLAST of MS000269 vs. ExPASy TrEMBL
Match: A0A5A7TMZ1 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00350 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29 Identity = 72/91 (79.12%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of MS000269 vs. ExPASy TrEMBL
Match: A0A6J1JHB4 (uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.3e-28 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of MS000269 vs. TAIR 10
Match: AT5G61630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 5.2e-17 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of MS000269 vs. TAIR 10
Match: AT5G07490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61630.1); Has 50 Blast hits to 50 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 3.5e-13 Identity = 43/89 (48.31%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of MS000269 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 9.0e-09 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of MS000269 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 9.0e-09 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of MS000269 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 5.8e-08 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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