Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAACCATCCACATCTCATCTCTCCCTTTCCTTTCTTCTCTTCTTCATCACACTCTCCTCCGCCGCCAGTGGCCGGAAACTGCTCAATTTTCCAGACATGTCTTGGGGACCCAGCGGGGGAAATAATAATGGGGGAGGGAATCCCAATGGGAACTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCGAGCCCCGGGAGCGGCTGGGGTTTCGGATCGGGCTCCGGCCGCTCCCCGACCGGTTTTGGGAAAGGTTATGGATATGGGTTCGGGTCGGGGTCGGGGTCGGGATCGGGATATGGCTACGGAAGTGGGAGTGGTGGTGCTCGTGGTGGTGGATATGGATCCGGAAGTGGCTACGGTAATTCTGGTGGAGGCGGTACCGGTGGCGGATACGGTGGTCCAGGTGGTGGCGGATATGGTGGTTCAGGTGGCAACGAGTATCGTTCGTCAACCGTTACGAAAGACGGCAGAAGCAAACATGGG
mRNA sequence
ATGAAAAAACCATCCACATCTCATCTCTCCCTTTCCTTTCTTCTCTTCTTCATCACACTCTCCTCCGCCGCCAGTGGCCGGAAACTGCTCAATTTTCCAGACATGTCTTGGGGACCCAGCGGGGGAAATAATAATGGGGGAGGGAATCCCAATGGGAACTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCGAGCCCCGGGAGCGGCTGGGGTTTCGGATCGGGCTCCGGCCGCTCCCCGACCGGTTTTGGGAAAGGTTATGGATATGGGTTCGGGTCGGGGTCGGGGTCGGGATCGGGATATGGCTACGGAAGTGGGAGTGGTGGTGCTCGTGGTGGTGGATATGGATCCGGAAGTGGCTACGGTAATTCTGGTGGAGGCGGTACCGGTGGCGGATACGGTGGTCCAGGTGGTGGCGGATATGGTGGTTCAGGTGGCAACGAGTATCGTTCGTCAACCGTTACGAAAGACGGCAGAAGCAAACATGGG
Coding sequence (CDS)
ATGAAAAAACCATCCACATCTCATCTCTCCCTTTCCTTTCTTCTCTTCTTCATCACACTCTCCTCCGCCGCCAGTGGCCGGAAACTGCTCAATTTTCCAGACATGTCTTGGGGACCCAGCGGGGGAAATAATAATGGGGGAGGGAATCCCAATGGGAACTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCGAGCCCCGGGAGCGGCTGGGGTTTCGGATCGGGCTCCGGCCGCTCCCCGACCGGTTTTGGGAAAGGTTATGGATATGGGTTCGGGTCGGGGTCGGGGTCGGGATCGGGATATGGCTACGGAAGTGGGAGTGGTGGTGCTCGTGGTGGTGGATATGGATCCGGAAGTGGCTACGGTAATTCTGGTGGAGGCGGTACCGGTGGCGGATACGGTGGTCCAGGTGGTGGCGGATATGGTGGTTCAGGTGGCAACGAGTATCGTTCGTCAACCGTTACGAAAGACGGCAGAAGCAAACATGGG
Protein sequence
MKKPSTSHLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG
Homology
BLAST of MS000265 vs. NCBI nr
Match:
XP_022141166.1 (putative glycine-rich cell wall structural protein 1 [Momordica charantia])
HSP 1 Score: 278.5 bits (711), Expect = 3.9e-71
Identity = 164/169 (97.04%), Postives = 164/169 (97.04%), Query Frame = 0
Query: 1 MKKPSTSHLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP 60
MKK ST HLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP
Sbjct: 1 MKKTSTFHLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP 60
Query: 61 NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG 120
NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG
Sbjct: 61 NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG 120
Query: 121 YGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
YG GSGYGNS GGGTGGGY GPGGGGYGGSGGNEYRSSTVTKDGRSKHG
Sbjct: 121 YGXGSGYGNSXGGGTGGGYXGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 169
BLAST of MS000265 vs. NCBI nr
Match:
XP_022922583.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG7014856.1 hypothetical protein SDJN02_22486, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 136/170 (80.00%), Postives = 140/170 (82.35%), Query Frame = 0
Query: 1 MKKPSTSHLS-LSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHG 60
MKKPS HLS L FLLFFIT SSA GRKLLN PDM W G+ NGGGNP G YGSAHG
Sbjct: 1 MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHG 60
Query: 61 PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGG 120
PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSG GGA GG
Sbjct: 61 PNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGG 120
Query: 121 GYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
GYGSGSGYGNSG G GGGYGG GGGYG S G EY S VTKD +S+HG
Sbjct: 121 GYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG 165
BLAST of MS000265 vs. NCBI nr
Match:
XP_022984407.1 (glycine-rich cell wall structural protein 2-like [Cucurbita maxima])
HSP 1 Score: 204.9 bits (520), Expect = 5.4e-49
Identity = 135/170 (79.41%), Postives = 140/170 (82.35%), Query Frame = 0
Query: 1 MKKPSTSHLS-LSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHG 60
MKKPS HLS L FLLFFIT+SSA GRKLLN PDM W G+ NGGGNP G YGSAHG
Sbjct: 1 MKKPSPFHLSPLFFLLFFITVSSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHG 60
Query: 61 PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGG 120
PNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYGYGFGSGSGSGSGYGYGSG GGA GG
Sbjct: 61 PNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGG 120
Query: 121 GYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
GYGSGSGYGNSG G GGGYGG GGGYG S G EY S VTKD +S+HG
Sbjct: 121 GYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG 165
BLAST of MS000265 vs. NCBI nr
Match:
XP_023553046.1 (keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 202.6 bits (514), Expect = 2.7e-48
Identity = 134/170 (78.82%), Postives = 138/170 (81.18%), Query Frame = 0
Query: 1 MKKPSTSHLS-LSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHG 60
MKKPS HLS L FLLFFIT SSA GRKLLN PDM W G+ NGGGNP G YGSAHG
Sbjct: 1 MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHG 60
Query: 61 PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGG 120
PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSG GGA GG
Sbjct: 61 PNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGG 120
Query: 121 GYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
GYGSGSGYGNS G GGGYG GGGYG S G EY S VTKD +S+HG
Sbjct: 121 GYGSGSGYGNSADSGDGGGYGNSSGGGYGNSSGGEYPPSAVTKD-KSRHG 165
BLAST of MS000265 vs. NCBI nr
Match:
XP_004146895.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN53182.1 hypothetical protein Csa_015364 [Cucumis sativus])
HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 127/169 (75.15%), Postives = 134/169 (79.29%), Query Frame = 0
Query: 1 MKKPSTSHLSLSFLLFFI-----TLSSAASGRKLLNFPDMSWG-PSGGNNNGGGNPNGNY 60
MK+PS HLS F L F+ T+S A+ RKLLNFPDMSWG PSGG G GNP G Y
Sbjct: 1 MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60
Query: 61 GSAHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
GS HGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG
Sbjct: 61 GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
Query: 121 GARGGGYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKD 164
GA GGGYGSGSGYGNSGGGG+GGGYGGP G+EYRS T+D
Sbjct: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGP--------SGDEYRSPMTTRD 161
BLAST of MS000265 vs. ExPASy TrEMBL
Match:
A0A6J1CI83 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111011624 PE=4 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 1.9e-71
Identity = 164/169 (97.04%), Postives = 164/169 (97.04%), Query Frame = 0
Query: 1 MKKPSTSHLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP 60
MKK ST HLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP
Sbjct: 1 MKKTSTFHLSLSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHGP 60
Query: 61 NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG 120
NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG
Sbjct: 61 NWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGG 120
Query: 121 YGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
YG GSGYGNS GGGTGGGY GPGGGGYGGSGGNEYRSSTVTKDGRSKHG
Sbjct: 121 YGXGSGYGNSXGGGTGGGYXGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 169
BLAST of MS000265 vs. ExPASy TrEMBL
Match:
A0A6J1E737 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430548 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 5.3e-50
Identity = 136/170 (80.00%), Postives = 140/170 (82.35%), Query Frame = 0
Query: 1 MKKPSTSHLS-LSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHG 60
MKKPS HLS L FLLFFIT SSA GRKLLN PDM W G+ NGGGNP G YGSAHG
Sbjct: 1 MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHG 60
Query: 61 PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGG 120
PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSG GGA GG
Sbjct: 61 PNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGG 120
Query: 121 GYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
GYGSGSGYGNSG G GGGYGG GGGYG S G EY S VTKD +S+HG
Sbjct: 121 GYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG 165
BLAST of MS000265 vs. ExPASy TrEMBL
Match:
A0A6J1J236 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482714 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 135/170 (79.41%), Postives = 140/170 (82.35%), Query Frame = 0
Query: 1 MKKPSTSHLS-LSFLLFFITLSSAASGRKLLNFPDMSWGPSGGNNNGGGNPNGNYGSAHG 60
MKKPS HLS L FLLFFIT+SSA GRKLLN PDM W G+ NGGGNP G YGSAHG
Sbjct: 1 MKKPSPFHLSPLFFLLFFITVSSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHG 60
Query: 61 PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGG 120
PNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYGYGFGSGSGSGSGYGYGSG GGA GG
Sbjct: 61 PNWDYNWGWGSSPGSGWGYGSGSGRSATGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGG 120
Query: 121 GYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKDGRSKHG 170
GYGSGSGYGNSG G GGGYGG GGGYG S G EY S VTKD +S+HG
Sbjct: 121 GYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG 165
BLAST of MS000265 vs. ExPASy TrEMBL
Match:
A0A0A0KXP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025120 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 5.5e-47
Identity = 127/169 (75.15%), Postives = 134/169 (79.29%), Query Frame = 0
Query: 1 MKKPSTSHLSLSFLLFFI-----TLSSAASGRKLLNFPDMSWG-PSGGNNNGGGNPNGNY 60
MK+PS HLS F L F+ T+S A+ RKLLNFPDMSWG PSGG G GNP G Y
Sbjct: 1 MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAY 60
Query: 61 GSAHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
GS HGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG
Sbjct: 61 GSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSG 120
Query: 121 GARGGGYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKD 164
GA GGGYGSGSGYGNSGGGG+GGGYGGP G+EYRS T+D
Sbjct: 121 GAHGGGYGSGSGYGNSGGGGSGGGYGGP--------SGDEYRSPMTTRD 161
BLAST of MS000265 vs. ExPASy TrEMBL
Match:
A0A5A7TRC6 (Glycine-rich cell wall structural protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00320 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 2.7e-46
Identity = 128/168 (76.19%), Postives = 132/168 (78.57%), Query Frame = 0
Query: 1 MKKPSTSHL-SLSFLLFFITLSSAASG----RKLLNFPDMSWGPSGGNNNGGGNPNGNYG 60
MK+PS HL SL FLLF +T SS SG RKLLNFPDMSWG G G GNP G YG
Sbjct: 1 MKQPSKFHLSSLFFLLFVLTSSSTVSGAATPRKLLNFPDMSWGSPNGGGGGNGNPTGAYG 60
Query: 61 SAHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGG 120
S H PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGG
Sbjct: 61 SGHAPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGG 120
Query: 121 ARGGGYGSGSGYGNSGGGGTGGGYGGPGGGGYGGSGGNEYRSSTVTKD 164
A GGGYGSGSGYGNSGGGG GGGGYGG G+EYRS T T+D
Sbjct: 121 AHGGGYGSGSGYGNSGGGG--------GGGGYGGPSGDEYRSPTTTRD 160
BLAST of MS000265 vs. TAIR 10
Match:
AT5G61660.1 (glycine-rich protein )
HSP 1 Score: 107.8 bits (268), Expect = 8.4e-24
Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = 0
Query: 48 GNPNGNYGSAHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGY 107
GN G GS GPNW+YNWGWGS+PGSGWG+G+GSGRSPTG+G+G GYG+GSGSGSG+GY
Sbjct: 28 GNMPGESGSGRGPNWEYNWGWGSAPGSGWGYGAGSGRSPTGWGRGSGYGYGSGSGSGTGY 87
Query: 108 GYGSGSGGARGGGYGSGSGYGNSGGGGTGGGYGG 142
GYGSG GGARGGGYG GSG G SGGGG GGG+ G
Sbjct: 88 GYGSGGGGARGGGYGYGSGNGRSGGGGGGGGFNG 121
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141166.1 | 3.9e-71 | 97.04 | putative glycine-rich cell wall structural protein 1 [Momordica charantia] | [more] |
XP_022922583.1 | 1.1e-49 | 80.00 | glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG701485... | [more] |
XP_022984407.1 | 5.4e-49 | 79.41 | glycine-rich cell wall structural protein 2-like [Cucurbita maxima] | [more] |
XP_023553046.1 | 2.7e-48 | 78.82 | keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_004146895.1 | 1.1e-46 | 75.15 | glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN53182.1 hypoth... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CI83 | 1.9e-71 | 97.04 | putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3... | [more] |
A0A6J1E737 | 5.3e-50 | 80.00 | glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 G... | [more] |
A0A6J1J236 | 2.6e-49 | 79.41 | glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=... | [more] |
A0A0A0KXP2 | 5.5e-47 | 75.15 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025120 PE=4 SV=1 | [more] |
A0A5A7TRC6 | 2.7e-46 | 76.19 | Glycine-rich cell wall structural protein 2 OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G61660.1 | 8.4e-24 | 76.60 | glycine-rich protein | [more] |