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MS000264 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAATATCTGCTGCTATCTCAGCCTCATTGCCAACAGTATGCACTTCACAGCATCATGTCTCCAAGAAGAAACAGCATGCTCATTATCAAGCCAGACCCACCTATTCCTTCCCGGCCCCGGAGGTCGTTAGTACTATCAATGTTGATGGCGGGGGTCGGGACAGTTTCGACACTGCTGAACGACACGGTAGAGACAAGCTAAATGAAGATACTGATGCATGGAACCATGGAGAAAGGTTCACAGATGAGAGATGGAAAAATGGGACATGGGATCTTAATATGTTTGTGAAGAATGGCAAGATGGATTGGGAAGGTGTCATTGTTGCAGGTAAATGTAAACCGAATCCTTCATTTAGTGATTAAATTTATCGTAACCTATCAATATCATAATTTAAACATGTGATTTTTTAAGAGCAGAGATTTATGATTTCTGAAAATAAATGAAAGGGATATATATATGCTAAATTACAAACATATCCCTAAACTTTATCCATTTGTTTAAAAAAATGTTCTTATCTTTTTATTGACCTTTCATAGACGTTTCAAAAATATCATTTGAGTGAACACTTGTTAATATTTTGAACAAAAAAATTGACGTGGTAGAATTTGGAACGACGTGACAATAAGCAATCATATTTTAAAAAGGGGATGAGCGTAAAATTGGGTACACAATCGAAAAGCAAACTCTATTGACAATAGATTAAGTGGAAGAACCTCTATGCCACGTCAACTTCCACGTTGCTGTTCCACATTCTGCTACACCAACTTTGCATTCAAAATATTGAAACAATGTTTGTTAAAAGAGTATTTTTTAAACCAATCACAAAATTCGAGGTCTTTATTTATTTATTTATTATTTTTTTAAATTAGCCATTTTTTCTTTTTCTATGTTAAATTGCAATGGGTTTACACTTAAATTTTTAAATGTAGAGGCAAAGAGGAGGAAGATTCTTGAAATATATCCAGAAGCAGCTACAAATCAGCATCCAGTGGTCTTCAGAAGCTCCATCATTCCATGGTGGGCATGGCTCTCAAACTCATACCTCCCACAGGCAGAGCTACTTAATGGTACTAATTTAAGAGTTTTTTTGGTTAAAATTTTAATGAATGTTTTTAACTAATTAAATGATGAGAAAATCTAAAAACAAATAAAAAGTACTTAAAATGCTTGTGGATGAAACATTTAATTAGATTTTTAAAAATATAAATGCTCCACTTTAAAACACTTATCATAAAACTACTTTTGGTAGAAAATCAGTTCTTCAACCGGTAAAAGTCGCTTTTGACCGCTTTTTCAAAATTTAACCAAACACGGCTAGTTGTTATAAAATTACTTTTAGCCATCCATTAAACTGATAACTATTAAATTTTCAGTCTTCTATTTTATTCAAAAAAAAGTTTCTTAAAAATTTCAATTATATTCGATCAATGATGACCCTCTATGGATTCGCCTATAAGCCGCCGCTAAAATTACAAAAATAAGAAGTCTTCTTTTGTTTCTCAATGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCATGTCCCTCCCGTGTGGGTCTCCGTGATCTAAAACGAAACCAATCTTGTCGGATATGTATATTGAAATTGTGTGACCCTCCGGTTTGCAAGACAATTTGGTTTTGACTAATGAATTCTGACACCCGGTCACGACGTCAATCAAGTGCGTCATTTTTAACCTTTTGGAACTAGTGACGATATACTTTTTATAAATACTTTGAGTAAAGTATCATTTCTTTATTATTTTTTTCCTAATATTACATCATTCAAGGGGTGAGGATTCAAACATTTGACTTAGAAAAAAAAAACTATTAATATTTTAACAAGTTGAATTATCCTCGTATTACCTGATTGTTAATATTTTCTATCGGTGTAGGTAGGGCAGCAATGTTAGGGTTCTTCATGGCCTACGTTGTAGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGTAATTTCCTATGCAAATCAGCTCTTTTTGTAACAGTTATTAGTGTGTTACTGTTTAGGCAAACTGAGGATGTTGAGGGCTTGAGAAAGCTAGCTGAAGAAGCCACCTTCTATGACAAGCAATGGCAAGCTTCCCGAGTCGAGAAAAAA ATGGCTTCAATATCTGCTGCTATCTCAGCCTCATTGCCAACAGTATGCACTTCACAGCATCATGTCTCCAAGAAGAAACAGCATGCTCATTATCAAGCCAGACCCACCTATTCCTTCCCGGCCCCGGAGGTCGTTAGTACTATCAATGTTGATGGCGGGGGTCGGGACAGTTTCGACACTGCTGAACGACACGGTAGAGACAAGCTAAATGAAGATACTGATGCATGGAACCATGGAGAAAGGTTCACAGATGAGAGATGGAAAAATGGGACATGGGATCTTAATATGTTTGTGAAGAATGGCAAGATGGATTGGGAAGGTGTCATTGTTGCAGAGGCAAAGAGGAGGAAGATTCTTGAAATATATCCAGAAGCAGCTACAAATCAGCATCCAGTGGTCTTCAGAAGCTCCATCATTCCATGGTGGGCATGGCTCTCAAACTCATACCTCCCACAGGCAGAGCTACTTAATGGTAGGGCAGCAATGTTAGGGTTCTTCATGGCCTACGTTGTAGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGTAATTTCCTATGCAAATCAGCTCTTTTTGTAACAGTTATTAGTGTGTTACTGTTTAGGCAAACTGAGGATGTTGAGGGCTTGAGAAAGCTAGCTGAAGAAGCCACCTTCTATGACAAGCAATGGCAAGCTTCCCGAGTCGAGAAAAAA ATGGCTTCAATATCTGCTGCTATCTCAGCCTCATTGCCAACAGTATGCACTTCACAGCATCATGTCTCCAAGAAGAAACAGCATGCTCATTATCAAGCCAGACCCACCTATTCCTTCCCGGCCCCGGAGGTCGTTAGTACTATCAATGTTGATGGCGGGGGTCGGGACAGTTTCGACACTGCTGAACGACACGGTAGAGACAAGCTAAATGAAGATACTGATGCATGGAACCATGGAGAAAGGTTCACAGATGAGAGATGGAAAAATGGGACATGGGATCTTAATATGTTTGTGAAGAATGGCAAGATGGATTGGGAAGGTGTCATTGTTGCAGAGGCAAAGAGGAGGAAGATTCTTGAAATATATCCAGAAGCAGCTACAAATCAGCATCCAGTGGTCTTCAGAAGCTCCATCATTCCATGGTGGGCATGGCTCTCAAACTCATACCTCCCACAGGCAGAGCTACTTAATGGTAGGGCAGCAATGTTAGGGTTCTTCATGGCCTACGTTGTAGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGTAATTTCCTATGCAAATCAGCTCTTTTTGTAACAGTTATTAGTGTGTTACTGTTTAGGCAAACTGAGGATGTTGAGGGCTTGAGAAAGCTAGCTGAAGAAGCCACCTTCTATGACAAGCAATGGCAAGCTTCCCGAGTCGAGAAAAAA MASISAAISASLPTVCTSQHHVSKKKQHAHYQARPTYSFPAPEVVSTINVDGGGRDSFDTAERHGRDKLNEDTDAWNHGERFTDERWKNGTWDLNMFVKNGKMDWEGVIVAEAKRRKILEIYPEAATNQHPVVFRSSIIPWWAWLSNSYLPQAELLNGRAAMLGFFMAYVVDALTGIGIVGQSGNFLCKSALFVTVISVLLFRQTEDVEGLRKLAEEATFYDKQWQASRVEKK Homology
BLAST of MS000264 vs. NCBI nr
Match: XP_022141114.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia]) HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126 Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of MS000264 vs. NCBI nr
Match: XP_023551912.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343.2 bits (879), Expect = 1.8e-90 Identity = 181/237 (76.37%), Postives = 198/237 (83.54%), Query Frame = 0
BLAST of MS000264 vs. NCBI nr
Match: XP_022984403.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 340.9 bits (873), Expect = 8.7e-90 Identity = 182/238 (76.47%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of MS000264 vs. NCBI nr
Match: XP_022922577.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 335.9 bits (860), Expect = 2.8e-88 Identity = 178/237 (75.11%), Postives = 194/237 (81.86%), Query Frame = 0
BLAST of MS000264 vs. NCBI nr
Match: XP_038875279.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 322.4 bits (825), Expect = 3.2e-84 Identity = 165/233 (70.82%), Postives = 183/233 (78.54%), Query Frame = 0
BLAST of MS000264 vs. ExPASy Swiss-Prot
Match: Q9SYX1 (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 9.8e-52 Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0
BLAST of MS000264 vs. ExPASy Swiss-Prot
Match: Q6NKS4 (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 6.0e-49 Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of MS000264 vs. ExPASy TrEMBL
Match: A0A6J1CHN0 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011587 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 9.6e-127 Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 0
BLAST of MS000264 vs. ExPASy TrEMBL
Match: A0A6J1JAE2 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482711 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 4.2e-90 Identity = 182/238 (76.47%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of MS000264 vs. ExPASy TrEMBL
Match: A0A6J1E3P1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430544 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88 Identity = 178/237 (75.11%), Postives = 194/237 (81.86%), Query Frame = 0
BLAST of MS000264 vs. ExPASy TrEMBL
Match: A0A5D3CYT8 (Chlorophyll A-B binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00310 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.1e-81 Identity = 165/243 (67.90%), Postives = 189/243 (77.78%), Query Frame = 0
BLAST of MS000264 vs. ExPASy TrEMBL
Match: A0A1S3BXB8 (uncharacterized protein LOC103494445 OS=Cucumis melo OX=3656 GN=LOC103494445 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.1e-81 Identity = 165/243 (67.90%), Postives = 189/243 (77.78%), Query Frame = 0
BLAST of MS000264 vs. TAIR 10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 204.9 bits (520), Expect = 7.0e-53 Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0
BLAST of MS000264 vs. TAIR 10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 195.7 bits (496), Expect = 4.2e-50 Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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