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MS000261 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTACGAATGTATACAAGGATCCAGATGACGGGCGGCAGCGGTTCTTGCTCGAATTGGAATTTGTTCAATGTCTCGCCAATCCAACCTACATTCACTGTACGTTGTTGCAAAATTTAGGGTTCTATATTGGCAGTTGGATAATTTCTAATGCTTGAAACTTCAAATTGAAATGAGTATGTGATTGTATACTAACCCATTTAAGATAAAACGGTCCACTGTTTTTTTTTTGTTGTAGTTAAAGAATTACTTCCAAACCCGAACCCTTTCTAGATTAATTCAGTTTCACTTGGGATTTCTACTGTGCTAAACAGACATTACATTGTGCTTGACATAAAAACGAACCAATCTGTAAAGCAAATTCTACTTCTTTGTTCTAATGACAAAGTAGATTAATCTGTTAGCTTAAATTTTCCTATTGTAATACCTCATAGGAATTTTGTTTTTGTTTATTCATAATTTTCTCAGTTGCATTTCCCTGTGAAGTGTTAATTTTAAATTTATCAGTGCGAAAAAGAAAAATACTTTGAGATATCAGATTTTGGGCACTCAGAACCTGTGTTCCTTCCAAATTTGCAGCTTCATGAACTAGTGTAGCACCTGGATAAAATTTTATCTTTTATGCCTGACTACTTTAAGTCTGTAACTTACTGTTTTTACTACAAATTCACCATAGAATTTATCTTTTATGTGCCTTCTCAACTCAGAGATCGGTGCTCAATCTTTTTGCCTTAGCAGTGTACCACTCCATACAGTGGTTCCACATATAATGTATTGCCTGGAATTCTATTCTTTTGATGATATGTTATGGTCTCGTACGACTAAAGTACATTTCTGAAGTATCACCCTTTTCTTAATTTTCTTGAGGCAGTTATCGTCACGTACTCACTTGAATATACTCCTTCAGTGAATGCTGCATATGCAAATTGGCATTGAAATATTGGAACAAATGCTCTTTATCCTCCCATTTCTGATAGCTGATCATCAAGTTTTTATACAGATCTGGCTCAGAATCGTTACTTTGAGGATGAAGCTTTCATTGGTTACTTGAAGTACCTTCAATATTGGCAACGACCAGAGTATATTAAGTTTATAATGTGAGTAAGATCTTTCCATCTTGTGTTACATGAGCTTTTCCCTAAACTGAAGAAACTATTGGGATTGACTTTAATGGTTTTTCTAGGTATCCTCATAGTTTGTTTTTCCTTGAACTTCTACAAAATGCAAACTTCCGAAATGCAATGGCTCATCCTGCCAACAAGGTTACTGGAATCTCTATGACCTTTTCTTTCTGCTCGATTTCCTTCTTGATATTAGATAATCAATATTAATTTGATTGTAAATTTTTTGGCTCCCTTGTCCCTGGTACGATTTTATCAAGTACCGGTTCAATTGTTATCAGGCTTCTCTTTCCTCATCACAGTAACCTGGTTCTTCTAATATTGGTTTTAAACTAGCTAATATTTTAAGGGAAAGTGGTGCAACATTGAGGTTGTTCATTGGTCCTTTTTTTTTTATGTATATTTATTTTAAAGAGATTTACTCTATTCGCTATCAGTTTTATGCTTTGATCTACTTCATCAATGTTTGGGACTGTAAGGAAACGTCTCTGGTATAGTTTGACTGTTATGTTTTATTTCTTGTTTGGCATGACTGGTCAAATTCGAAACGTCTCCAATCTCCACCAGTTTGTGATAGATATTTGTTGCTTACTCGAACTGTGTGAGAGTCCTATTAGGGATAGTTTGGGAATATTATTAGTATGGTAGTGGGGGCCTTATGGTAATTAGTCAGGGGTGAGTGGAATATAATAAAGGCGGTGGGAGAGAAGGAGGTCATTTGTTGGGAATAGTCTAAGGTGGAGAACTTAGTATAATTCTTGGGAGAGAGATATCCCTCTTGAAAGACTATCGATATTGTAGCGTCTTTTTGACATTGCAATACAGTTATCTTGTCTCGTTTAGTGTATTTCCCTAACAAACTGTTTACTCTTTATGTCAGATATTTTTCCTTTTCCCTTTTCTTAACATTTTAACACACTTTCCACTATTTGGAATTTCTTAGGAATTGTCACACAGGCAGCAATTTTACTTTTGGAAGAACTACAGAAACAATCGTTTGAAACACATTTTACCGAGACCGCTTCCCGAACCTGCAGCTTTACCACCCCCAGTTTCTGTTCCACCTCAGGCACCTGTGCCCGCTGCAGCAGCCCCTGGCATGGCAGCTTCTCCTGCTGGTGCTCCTGCCCTTTCTCCAATGCAATATGGTATTCCCCCTGGGTCCGGACTTGCAAAAAATGACATGAAGAGTGGTGGAATTGATCGACGAAAGAGAAAACAACACGTAATTTATCGC CCTACGAATGTATACAAGGATCCAGATGACGGGCGGCAGCGGTTCTTGCTCGAATTGGAATTTGTTCAATGTCTCGCCAATCCAACCTACATTCACTATCTGGCTCAGAATCGTTACTTTGAGGATGAAGCTTTCATTGGTTACTTGAAGTACCTTCAATATTGGCAACGACCAGAGTATATTAAGTTTATAATGTATCCTCATAGTTTGTTTTTCCTTGAACTTCTACAAAATGCAAACTTCCGAAATGCAATGGCTCATCCTGCCAACAAGGAATTGTCACACAGGCAGCAATTTTACTTTTGGAAGAACTACAGAAACAATCGTTTGAAACACATTTTACCGAGACCGCTTCCCGAACCTGCAGCTTTACCACCCCCAGTTTCTGTTCCACCTCAGGCACCTGTGCCCGCTGCAGCAGCCCCTGGCATGGCAGCTTCTCCTGCTGGTGCTCCTGCCCTTTCTCCAATGCAATATGGTATTCCCCCTGGGTCCGGACTTGCAAAAAATGACATGAAGAGTGGTGGAATTGATCGACGAAAGAGAAAACAACACGTAATTTATCGC CCTACGAATGTATACAAGGATCCAGATGACGGGCGGCAGCGGTTCTTGCTCGAATTGGAATTTGTTCAATGTCTCGCCAATCCAACCTACATTCACTATCTGGCTCAGAATCGTTACTTTGAGGATGAAGCTTTCATTGGTTACTTGAAGTACCTTCAATATTGGCAACGACCAGAGTATATTAAGTTTATAATGTATCCTCATAGTTTGTTTTTCCTTGAACTTCTACAAAATGCAAACTTCCGAAATGCAATGGCTCATCCTGCCAACAAGGAATTGTCACACAGGCAGCAATTTTACTTTTGGAAGAACTACAGAAACAATCGTTTGAAACACATTTTACCGAGACCGCTTCCCGAACCTGCAGCTTTACCACCCCCAGTTTCTGTTCCACCTCAGGCACCTGTGCCCGCTGCAGCAGCCCCTGGCATGGCAGCTTCTCCTGCTGGTGCTCCTGCCCTTTCTCCAATGCAATATGGTATTCCCCCTGGGTCCGGACTTGCAAAAAATGACATGAAGAGTGGTGGAATTGATCGACGAAAGAGAAAACAACACGTAATTTATCGC PTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHSLFFLELLQNANFRNAMAHPANKELSHRQQFYFWKNYRNNRLKHILPRPLPEPAALPPPVSVPPQAPVPAAAAPGMAASPAGAPALSPMQYGIPPGSGLAKNDMKSGGIDRRKRKQHVIYR Homology
BLAST of MS000261 vs. NCBI nr
Match: XP_022141008.1 (mediator of RNA polymerase II transcription subunit 31 [Momordica charantia]) HSP 1 Score: 371.3 bits (952), Expect = 4.9e-99 Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MS000261 vs. NCBI nr
Match: XP_038880162.1 (mediator of RNA polymerase II transcription subunit 31 [Benincasa hispida]) HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90 Identity = 170/183 (92.90%), Postives = 173/183 (94.54%), Query Frame = 0
BLAST of MS000261 vs. NCBI nr
Match: XP_004146891.1 (mediator of RNA polymerase II transcription subunit 31 [Cucumis sativus] >KGN53186.1 hypothetical protein Csa_014598 [Cucumis sativus]) HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86 Identity = 166/184 (90.22%), Postives = 171/184 (92.93%), Query Frame = 0
BLAST of MS000261 vs. NCBI nr
Match: XP_008453845.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 31 [Cucumis melo] >KAA0044690.1 mediator of RNA polymerase II transcription subunit 31 [Cucumis melo var. makuwa] >TYK16894.1 mediator of RNA polymerase II transcription subunit 31 [Cucumis melo var. makuwa]) HSP 1 Score: 329.7 bits (844), Expect = 1.6e-86 Identity = 167/184 (90.76%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of MS000261 vs. NCBI nr
Match: XP_022984406.1 (mediator of RNA polymerase II transcription subunit 31-like [Cucurbita maxima]) HSP 1 Score: 328.6 bits (841), Expect = 3.6e-86 Identity = 164/183 (89.62%), Postives = 172/183 (93.99%), Query Frame = 0
BLAST of MS000261 vs. ExPASy Swiss-Prot
Match: Q8VYB1 (Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana OX=3702 GN=MED31 PE=1 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-70 Identity = 141/191 (73.82%), Postives = 155/191 (81.15%), Query Frame = 0
BLAST of MS000261 vs. ExPASy Swiss-Prot
Match: Q54NI7 (Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium discoideum OX=44689 GN=med31 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32 Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of MS000261 vs. ExPASy Swiss-Prot
Match: Q6DH26 (Mediator of RNA polymerase II transcription subunit 31 OS=Danio rerio OX=7955 GN=med31 PE=2 SV=2) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of MS000261 vs. ExPASy Swiss-Prot
Match: A0JNN3 (Mediator of RNA polymerase II transcription subunit 31 OS=Bos taurus OX=9913 GN=MED31 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.0e-23 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of MS000261 vs. ExPASy Swiss-Prot
Match: Q9CXU1 (Mediator of RNA polymerase II transcription subunit 31 OS=Mus musculus OX=10090 GN=Med31 PE=1 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 2.7e-23 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of MS000261 vs. ExPASy TrEMBL
Match: A0A6J1CJB2 (Mediator of RNA polymerase II transcription subunit 31 OS=Momordica charantia OX=3673 GN=LOC111011520 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99 Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MS000261 vs. ExPASy TrEMBL
Match: A0A0A0KZ88 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis sativus OX=3659 GN=Csa_4G025160 PE=3 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 6.1e-87 Identity = 166/184 (90.22%), Postives = 171/184 (92.93%), Query Frame = 0
BLAST of MS000261 vs. ExPASy TrEMBL
Match: A0A5D3D0Y1 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00280 PE=3 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 7.9e-87 Identity = 167/184 (90.76%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of MS000261 vs. ExPASy TrEMBL
Match: A0A1S3BY12 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo OX=3656 GN=LOC103494449 PE=3 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 7.9e-87 Identity = 167/184 (90.76%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of MS000261 vs. ExPASy TrEMBL
Match: A0A6J1J551 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucurbita maxima OX=3661 GN=LOC111482713 PE=3 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.8e-86 Identity = 164/183 (89.62%), Postives = 172/183 (93.99%), Query Frame = 0
BLAST of MS000261 vs. TAIR 10
Match: AT5G19910.1 (SOH1 family protein ) HSP 1 Score: 267.3 bits (682), Expect = 9.3e-72 Identity = 141/191 (73.82%), Postives = 155/191 (81.15%), Query Frame = 0
BLAST of MS000261 vs. TAIR 10
Match: AT5G19910.2 (SOH1 family protein ) HSP 1 Score: 251.5 bits (641), Expect = 5.3e-67 Identity = 141/221 (63.80%), Postives = 155/221 (70.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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