Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCTGCAATCACAGCTCTAAAGCCTCTTGCTGGATATGCGACCACACTAACAGACCTAGTAGCAGTCGAATATGAAGTGGCTAGCAAAATAAGAATTATGCTTGGATCAAAAGTATATTTGAGAAGTTCATTGCTCGATTGCATCCTTGATGCAGTGCAGTTTAATTCACCACTAGGGTATTGTTGCAATTATGTGGCAGGGATGCTTTCATGGACTGACATGTCGGAGTTTGTAATAATCAATGATGTTCTTCTTGTTACGAAATCCCCTGTTCTAGGAGATGACAGAGTAGCGTTAGAAGTGCAGAGACTCCACGAAACCTTCAAGGAAATAACACAAAACCGTACTCCTCAGTATTTTGCGATCACCATCTTTGGATTCAAGGCAAGACTGTTAGACAGGTCAAGATTCCCACACTTGATAGAAGTTGCCCGT
mRNA sequence
ATGAACTCTGCAATCACAGCTCTAAAGCCTCTTGCTGGATATGCGACCACACTAACAGACCTAGTAGCAGTCGAATATGAAGTGGCTAGCAAAATAAGAATTATGCTTGGATCAAAAGTATATTTGAGAAGTTCATTGCTCGATTGCATCCTTGATGCAGTGCAGTTTAATTCACCACTAGGGTATTGTTGCAATTATGTGGCAGGGATGCTTTCATGGACTGACATGTCGGAGTTTGTAATAATCAATGATGTTCTTCTTGTTACGAAATCCCCTGTTCTAGGAGATGACAGAGTAGCGTTAGAAGTGCAGAGACTCCACGAAACCTTCAAGGAAATAACACAAAACCGTACTCCTCAGTATTTTGCGATCACCATCTTTGGATTCAAGGCAAGACTGTTAGACAGGTCAAGATTCCCACACTTGATAGAAGTTGCCCGT
Coding sequence (CDS)
ATGAACTCTGCAATCACAGCTCTAAAGCCTCTTGCTGGATATGCGACCACACTAACAGACCTAGTAGCAGTCGAATATGAAGTGGCTAGCAAAATAAGAATTATGCTTGGATCAAAAGTATATTTGAGAAGTTCATTGCTCGATTGCATCCTTGATGCAGTGCAGTTTAATTCACCACTAGGGTATTGTTGCAATTATGTGGCAGGGATGCTTTCATGGACTGACATGTCGGAGTTTGTAATAATCAATGATGTTCTTCTTGTTACGAAATCCCCTGTTCTAGGAGATGACAGAGTAGCGTTAGAAGTGCAGAGACTCCACGAAACCTTCAAGGAAATAACACAAAACCGTACTCCTCAGTATTTTGCGATCACCATCTTTGGATTCAAGGCAAGACTGTTAGACAGGTCAAGATTCCCACACTTGATAGAAGTTGCCCGT
Protein sequence
MNSAITALKPLAGYATTLTDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNSPLGYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQYFAITIFGFKARLLDRSRFPHLIEVAR
Homology
BLAST of MS000255 vs. NCBI nr
Match:
XP_022140869.1 (uncharacterized protein LOC111011432 [Momordica charantia])
HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTLTDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNSPL 60
MNSAITALKPLAGYATTLTDLVA EYEVA+KIRIMLGSKVYLRSSLLD IL A Q +SPL
Sbjct: 145 MNSAITALKPLAGYATTLTDLVAAEYEVANKIRIMLGSKVYLRSSLLDSILYAAQCDSPL 204
Query: 61 GYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQ 120
GYCCNYVAGMLSWTDMSEFV+INDVLLVTKSPVLGDDRVA EVQRLHETFKEITQNRTPQ
Sbjct: 205 GYCCNYVAGMLSWTDMSEFVLINDVLLVTKSPVLGDDRVASEVQRLHETFKEITQNRTPQ 264
Query: 121 YFAITIFGFKARLLDRSRFPHLIEVAR 148
YFAIT FGFKARLLDRS+FPHLIEVAR
Sbjct: 265 YFAITTFGFKARLLDRSKFPHLIEVAR 291
BLAST of MS000255 vs. NCBI nr
Match:
KAA8550333.1 (hypothetical protein F0562_002017 [Nyssa sinensis])
HSP 1 Score: 94.0 bits (232), Expect = 1.2e-15
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTLTDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNSPL 60
+ + I AL+ + G +T TDL A E + A I ++G+ L+ +L ++ ++ L
Sbjct: 166 ITNRINALRAVIGMMSTETDLQAFEVDKAQVISTIMGANNCLKKLVLMKLIQVGSTDTQL 225
Query: 61 GYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQ 120
G C + L+WT+M+ V I D+LL+T SPVL D RVA EV L F IT + PQ
Sbjct: 226 GAVCANLCCTLAWTEMAGLVFICDMLLLTNSPVLRDPRVASEVMNLAVAFWLITASDYPQ 285
Query: 121 YFAITIFGFKARLLDRSRFPHLIEVAR 148
YF I + LL+RSRFP LI VA+
Sbjct: 286 YFRILASNHEKMLLERSRFPTLIAVAQ 312
BLAST of MS000255 vs. NCBI nr
Match:
XP_031737793.1 (uncharacterized protein LOC105434816 [Cucumis sativus] >XP_031737794.1 uncharacterized protein LOC105434816 [Cucumis sativus] >KGN56529.1 hypothetical protein Csa_010129 [Cucumis sativus])
HSP 1 Score: 85.9 bits (211), Expect = 3.2e-13
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTL--TDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNS 60
M + LK GY L TD VE+ A I+ MLGS V LR+S++ ++
Sbjct: 1 MRNRAIGLKAAVGYVGNLGPTDDFCVEFNAAFIIKRMLGSSVSLRASVMMELIRNRNARG 60
Query: 61 PLGYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRT 120
P+G C++V +L+W +M + V I D L++ KS VL D RV EV + E + ITQ
Sbjct: 61 PVGAVCSHVCEILNWAEMDDMVCIYDTLVLPKSHVLKDCRVLAEVGNIAEAYGVITQTNY 120
Query: 121 PQYFAITIFGFKARLLDRSRFPHLIEVAR 148
P++F I +++++RFP L+ VA+
Sbjct: 121 PRHFKILCPTTVTNVMNKNRFPILLAVAQ 149
BLAST of MS000255 vs. NCBI nr
Match:
GAU48142.1 (hypothetical protein TSUD_302750 [Trifolium subterraneum])
HSP 1 Score: 78.2 bits (191), Expect = 6.7e-11
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0
Query: 32 IRIMLGSKVYLRSSLLDCILDAVQFNSP---LGYCCNYVAGMLSWT-DMSEFVIINDVLL 91
IR MLG+ L +S++ ++++ FN P + CNY++ +SW+ DM F ++N LL
Sbjct: 208 IRTMLGTHA-LCTSVISFLMNS--FNHPDSQISSLCNYLSYTISWSGDMRVFTVMNKWLL 267
Query: 92 VTKSPVLGDDRVALEVQRLHETFKEITQNRTPQYFAITIFGFKARLLDRSRFPHLIEVA 147
TKSPVL RV LEV L ET K IT + PQYF+ + LD SRFP+L VA
Sbjct: 268 KTKSPVLSGSRVKLEVDNLEETIKAITSHTYPQYFSHLCSASELFHLDVSRFPNLFYVA 323
BLAST of MS000255 vs. NCBI nr
Match:
PNX84979.1 (hypothetical protein L195_g041044 [Trifolium pratense])
HSP 1 Score: 77.8 bits (190), Expect = 8.7e-11
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 22 VAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQF-NSPLGYCCNYVAGMLSWT-DMSEF 81
+ + E +R MLG+ LR+S++ ++D N + C Y++ +LSW+ D+ F
Sbjct: 176 IPFQQETELSVRTMLGTHA-LRNSIITFLMDNFNHSNQQISSLCQYLSYVLSWSGDLCVF 235
Query: 82 VIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQYFAITIFGFKARLLDRSRF 141
++N+ L+ TKSPVL D RV E + L E K I + PQYF + LD SRF
Sbjct: 236 TLMNERLVKTKSPVLSDSRVVAEAENLEELIKAIASHTYPQYFNHLCITSELFYLDVSRF 295
Query: 142 PHLIEVAR 148
P+L VA+
Sbjct: 296 PNLFAVAK 302
BLAST of MS000255 vs. ExPASy TrEMBL
Match:
A0A6J1CGZ7 (uncharacterized protein LOC111011432 OS=Momordica charantia OX=3673 GN=LOC111011432 PE=4 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 4.9e-68
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTLTDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNSPL 60
MNSAITALKPLAGYATTLTDLVA EYEVA+KIRIMLGSKVYLRSSLLD IL A Q +SPL
Sbjct: 145 MNSAITALKPLAGYATTLTDLVAAEYEVANKIRIMLGSKVYLRSSLLDSILYAAQCDSPL 204
Query: 61 GYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQ 120
GYCCNYVAGMLSWTDMSEFV+INDVLLVTKSPVLGDDRVA EVQRLHETFKEITQNRTPQ
Sbjct: 205 GYCCNYVAGMLSWTDMSEFVLINDVLLVTKSPVLGDDRVASEVQRLHETFKEITQNRTPQ 264
Query: 121 YFAITIFGFKARLLDRSRFPHLIEVAR 148
YFAIT FGFKARLLDRS+FPHLIEVAR
Sbjct: 265 YFAITTFGFKARLLDRSKFPHLIEVAR 291
BLAST of MS000255 vs. ExPASy TrEMBL
Match:
A0A5J5C4L1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002017 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 5.7e-16
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTLTDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNSPL 60
+ + I AL+ + G +T TDL A E + A I ++G+ L+ +L ++ ++ L
Sbjct: 166 ITNRINALRAVIGMMSTETDLQAFEVDKAQVISTIMGANNCLKKLVLMKLIQVGSTDTQL 225
Query: 61 GYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQ 120
G C + L+WT+M+ V I D+LL+T SPVL D RVA EV L F IT + PQ
Sbjct: 226 GAVCANLCCTLAWTEMAGLVFICDMLLLTNSPVLRDPRVASEVMNLAVAFWLITASDYPQ 285
Query: 121 YFAITIFGFKARLLDRSRFPHLIEVAR 148
YF I + LL+RSRFP LI VA+
Sbjct: 286 YFRILASNHEKMLLERSRFPTLIAVAQ 312
BLAST of MS000255 vs. ExPASy TrEMBL
Match:
A0A0A0L6A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122530 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 0
Query: 1 MNSAITALKPLAGYATTL--TDLVAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQFNS 60
M + LK GY L TD VE+ A I+ MLGS V LR+S++ ++
Sbjct: 1 MRNRAIGLKAAVGYVGNLGPTDDFCVEFNAAFIIKRMLGSSVSLRASVMMELIRNRNARG 60
Query: 61 PLGYCCNYVAGMLSWTDMSEFVIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRT 120
P+G C++V +L+W +M + V I D L++ KS VL D RV EV + E + ITQ
Sbjct: 61 PVGAVCSHVCEILNWAEMDDMVCIYDTLVLPKSHVLKDCRVLAEVGNIAEAYGVITQTNY 120
Query: 121 PQYFAITIFGFKARLLDRSRFPHLIEVAR 148
P++F I +++++RFP L+ VA+
Sbjct: 121 PRHFKILCPTTVTNVMNKNRFPILLAVAQ 149
BLAST of MS000255 vs. ExPASy TrEMBL
Match:
A0A2Z6PES4 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_302750 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0
Query: 32 IRIMLGSKVYLRSSLLDCILDAVQFNSP---LGYCCNYVAGMLSWT-DMSEFVIINDVLL 91
IR MLG+ L +S++ ++++ FN P + CNY++ +SW+ DM F ++N LL
Sbjct: 208 IRTMLGTHA-LCTSVISFLMNS--FNHPDSQISSLCNYLSYTISWSGDMRVFTVMNKWLL 267
Query: 92 VTKSPVLGDDRVALEVQRLHETFKEITQNRTPQYFAITIFGFKARLLDRSRFPHLIEVA 147
TKSPVL RV LEV L ET K IT + PQYF+ + LD SRFP+L VA
Sbjct: 268 KTKSPVLSGSRVKLEVDNLEETIKAITSHTYPQYFSHLCSASELFHLDVSRFPNLFYVA 323
BLAST of MS000255 vs. ExPASy TrEMBL
Match:
A0A2K3M2F8 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g041044 PE=4 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 4.2e-11
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 22 VAVEYEVASKIRIMLGSKVYLRSSLLDCILDAVQF-NSPLGYCCNYVAGMLSWT-DMSEF 81
+ + E +R MLG+ LR+S++ ++D N + C Y++ +LSW+ D+ F
Sbjct: 176 IPFQQETELSVRTMLGTHA-LRNSIITFLMDNFNHSNQQISSLCQYLSYVLSWSGDLCVF 235
Query: 82 VIINDVLLVTKSPVLGDDRVALEVQRLHETFKEITQNRTPQYFAITIFGFKARLLDRSRF 141
++N+ L+ TKSPVL D RV E + L E K I + PQYF + LD SRF
Sbjct: 236 TLMNERLVKTKSPVLSDSRVVAEAENLEELIKAIASHTYPQYFNHLCITSELFYLDVSRF 295
Query: 142 PHLIEVAR 148
P+L VA+
Sbjct: 296 PNLFAVAK 302
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140869.1 | 1.0e-67 | 92.52 | uncharacterized protein LOC111011432 [Momordica charantia] | [more] |
KAA8550333.1 | 1.2e-15 | 39.46 | hypothetical protein F0562_002017 [Nyssa sinensis] | [more] |
XP_031737793.1 | 3.2e-13 | 35.57 | uncharacterized protein LOC105434816 [Cucumis sativus] >XP_031737794.1 uncharact... | [more] |
GAU48142.1 | 6.7e-11 | 42.86 | hypothetical protein TSUD_302750 [Trifolium subterraneum] | [more] |
PNX84979.1 | 8.7e-11 | 35.94 | hypothetical protein L195_g041044 [Trifolium pratense] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CGZ7 | 4.9e-68 | 92.52 | uncharacterized protein LOC111011432 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A5J5C4L1 | 5.7e-16 | 39.46 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002017 PE=4 SV=1 | [more] |
A0A0A0L6A6 | 1.5e-13 | 35.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122530 PE=4 SV=1 | [more] |
A0A2Z6PES4 | 3.2e-11 | 42.86 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_302750 PE=4 SV... | [more] |
A0A2K3M2F8 | 4.2e-11 | 35.94 | Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g041044 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |