MS000142 (gene) Bitter gourd (TR) v1

Overview


Name	MS000142
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Altered inheritance of mitochondria protein 24, mitochondrial
Location	scaffold603: 47871 .. 50059 (-)
RNA-Seq Expression	MS000142
Synteny	MS000142

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTCTATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTATCTCCCTGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTCAGTAGCATTGTACTTCGTAATTCTGGTACAAGTGATGGATACATTGGGATTGCTGCACCTTCTCTTGCTAGGATTCTTCCGGTTTGTGCTTTGTTGAAAAAATCTCACATTAGCTGATTTTAGTTCCAATTTAGAACATTCCAAGTTTCTCTTTGATGTCATATATGTTTATACAATTATGTTGCAGATTGATATGGCAATGTTTGGTGGACAGCTTCTATGCCAGGTAGGGAATATTGTTCTCTTTGTTGTTCTGCTTAGTAGTTTCTCTGTGTTATTTTACTTAATAAATGATTTACCACTGTCCCCCTTCCCCTCCGCTTGTTTGAAAGAGACCAACATCTATATGTTTTAACAGTTAACACATTGGAATTTTAGTTGTCTACAATTCAGTTATTCAATTTGTCTTCTGGGATCCATTGCCTGATAATCTTCGCTTCATTTCTTCTTGATACGTAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAGTTGATCCCAGAGTACGCAATGTGATAACAGGTGTGGAGGTGAGTTGATTTATTATTTCTTATTGGCTAAACTCCTGCATGCATCTCTGCTTTCCGGTATTAATTTTATGCCTTTCCATAGTTATTTATTTTTCTCCCTCTTCCTACTCTTGATGTTATTTTAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCGGGTATGTGCTTCTCACTTCACATTTTATTTAGCAAATTCTCCGAAGGACCTGCTTGCATCTGTTATGCAATCATGAAAAGAAGCCTGAATTTCTATTTTTTTTTATGTGACCTGTTGGCTAGAGCATCCCAAATGTTCATTTTTTTATTAAGATCTATTTCCATTCTGATTATGGTGTCAAACACGACTGCCACCTTAAATTGTGCAAAGTCAGATGGAGTAATCTTCTGTAATATTAATTAAATCTCTGAAGTTTGTCCTTTCCTCGGAGATCTATGGTTCATAGTTTACCAGCTATGATATATACAATGGCAAGAAGGGAAAGGGAGATCACATTATCTATACTGATATATTTATTTTGATCTTCAAGATACAACGGACTTTATGCTTCAGCCTTTAGACAATTCAAAATACGCATTTTTATTTGAAGAAAAAACTTTTCATTCCTTCACAAATAATTTATGATATATGTCAGCTAATTATGAAAACTTTTCGGTTTCTGCTAGTTGTACAGAAAAATCTGGAGGTGGGTGAAGTACTATCCGTGGATATCTCCTGCATCGTGGCTTTGACCACCACTATTGATGTCCAAATCAAATACAATGGTCCTGTTAGAAGAGCAGTATTTGGAGTAAGAGTTCTCTATGTTTATTGCGTTTGCTTTTGGCTTTCTATATCTTCTCTTCGTTGGCCGTGCAATAAATTGGATTTCTGGGGCTCTTATATACGCAAAAGCCAGATCTTGCTACTAGAAAGACATTATATGTTATGCTTTTTTCAGATTATGACGATAGAGCCATGCTTTCTGTAATTTTAGTCCCTCTTTATACTCCGCGCCGCCAGTTGGGATGTGTCTAATAGTACTCATTGGCTCGACTAGGGTCGATATCTTGTTCTCCTTTCTTTCACCTTCTTTCATTTTTTTTTCCTTCAAGAAAAATTAAAAAAATAGAACCTTATGGCTATAAAGATGGAAATTTAGTACAACAATTTCAGCTCTCATTTTTAAGCCTCAAGTAGACCTTTAACACATTTGTCACTTTTTAAGGGCATCTCATGGTCGTTATTTGCAGGGTGACAATTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTCATCCAGAGTTTGCCGTTTCAACGACTTTCTCAGCGTATTGCAAGGTAATTACTGTCAGAATTGGTTGGAGCTGTGGGTTTCTCATCTTGCTTTGAATTTATTGTAAAAAGTATCTCAATCTTGCAGGGCCGTTACATCCCCAAACATGAGGGAAAACCCAAAGTTTTTCGTTCAACTTGCACTTTTCTTTTTTCTGGCTTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTA

mRNA sequence

GGCTCTATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTATCTCCCTGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTCAGTAGCATTGTACTTCGTAATTCTGGTACAAGTGATGGATACATTGGGATTGCTGCACCTTCTCTTGCTAGGATTCTTCCGATTGATATGGCAATGTTTGGTGGACAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAGTTGATCCCAGAGTACGCAATGTGATAACAGGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCGGTTGTACAGAAAAATCTGGAGGTGGGTGAAGTACTATCCGTGGATATCTCCTGCATCGTGGCTTTGACCACCACTATTGATGTCCAAATCAAATACAATGGTCCTGTTAGAAGAGCAGTATTTGGAGGTGACAATTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTCATCCAGAGTTTGCCGTTTCAACGACTTTCTCAGCGTATTGCAAGGGCCGTTACATCCCCAAACATGAGGGAAAACCCAAAGTTTTTCGTTCAACTTGCACTTTTCTTTTTTCTGGCTTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTA

Coding sequence (CDS)

GGCTCTATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTATCTCCCTGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTCAGTAGCATTGTACTTCGTAATTCTGGTACAAGTGATGGATACATTGGGATTGCTGCACCTTCTCTTGCTAGGATTCTTCCGATTGATATGGCAATGTTTGGTGGACAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAGTTGATCCCAGAGTACGCAATGTGATAACAGGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCGGTTGTACAGAAAAATCTGGAGGTGGGTGAAGTACTATCCGTGGATATCTCCTGCATCGTGGCTTTGACCACCACTATTGATGTCCAAATCAAATACAATGGTCCTGTTAGAAGAGCAGTATTTGGAGGTGACAATTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTCATCCAGAGTTTGCCGTTTCAACGACTTTCTCAGCGTATTGCAAGGGCCGTTACATCCCCAAACATGAGGGAAAACCCAAAGTTTTTCGTTCAACTTGCACTTTTCTTTTTTCTGGCTTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTA

Protein sequence

GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILPIDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV

Homology

[Close]

BLAST of MS000142 vs. NCBI nr
Match: XP_022154818.1 (uncharacterized protein LOC111021980 [Momordica charantia])

HSP 1 Score: 455.3 bits (1170), Expect = 3.2e-124
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 50  GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. NCBI nr
Match: XP_023551647.1 (uncharacterized protein LOC111809421 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENV+LPENEVGVWHWLFGKSV+SIVLRN+GTSDGY+GIAAPSLARILP
Sbjct: 29  GSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVTSIVLRNAGTSDGYVGIAAPSLARILP 88

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 89  IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 148

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 149 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 208

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 209 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of MS000142 vs. NCBI nr
Match: XP_023551646.1 (uncharacterized protein LOC111809421 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENV+LPENEVGVWHWLFGKSV+SIVLRN+GTSDGY+GIAAPSLARILP
Sbjct: 50  GSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVTSIVLRNAGTSDGYVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. NCBI nr
Match: XP_022922283.1 (uncharacterized protein LOC111430310 isoform X1 [Cucurbita moschata] >KAG6579401.1 hypothetical protein SDJN03_23849, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSG+IEMENV+LPENEVGVWHWLFGKSV+SIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 50  GSMCFMSGNIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. NCBI nr
Match: XP_022922284.1 (uncharacterized protein LOC111430310 isoform X2 [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSG+IEMENV+LPENEVGVWHWLFGKSV+SIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 29  GSMCFMSGNIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILP 88

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 89  IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 148

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 149 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 208

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 209 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of MS000142 vs. ExPASy TrEMBL
Match: A0A6J1DLC0 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021980 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 50  GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. ExPASy TrEMBL
Match: A0A6J1E2Y5 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430310 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.5e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSG+IEMENV+LPENEVGVWHWLFGKSV+SIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 29  GSMCFMSGNIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILP 88

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 89  IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 148

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 149 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 208

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 209 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of MS000142 vs. ExPASy TrEMBL
Match: A0A6J1E653 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430310 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.5e-121
Identity = 222/232 (95.69%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSG+IEMENV+LPENEVGVWHWLFGKSV+SIVLRNSGTSDGY+GIAAPSLARILP
Sbjct: 50  GSMCFMSGNIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. ExPASy TrEMBL
Match: A0A6J1ID96 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471527 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 221/232 (95.26%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENV+LPENEVGVWHWLFGKSV+SIVLRN+GTSDGY+GI APSLARILP
Sbjct: 29  GSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVTSIVLRNAGTSDGYVGITAPSLARILP 88

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 89  IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 148

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 149 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 208

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 209 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of MS000142 vs. ExPASy TrEMBL
Match: A0A6J1IBS7 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471527 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 221/232 (95.26%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMCFMSGSIEMENV+LPENEVGVWHWLFGKSV+SIVLRN+GTSDGY+GI APSLARILP
Sbjct: 50  GSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVTSIVLRNAGTSDGYVGITAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVITGVEGFLRQKLSGQGLAFILGG 120
           IDMAMFGG+LLCQPDAFLCSVNDVKVNNT+D RVRNV+TGVEGFLRQKLSGQGLAFILGG
Sbjct: 110 IDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVTGVEGFLRQKLSGQGLAFILGG 169

Query: 121 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 180
           GSVVQKNLEVGEVL+VDISCIVA+TTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF
Sbjct: 170 GSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 229

Query: 181 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV
Sbjct: 230 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of MS000142 vs. TAIR 10
Match: AT5G47420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 354.4 bits (908), Expect = 7.1e-98
Identity = 175/232 (75.43%), Postives = 204/232 (87.93%), Query Frame = 0


Query: 2   SMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILPI 61
           SMC+MSGSIEMEN Y PE EVGV  W+ GKSVSS+VLRN+G +DG++GIAAP LARILPI
Sbjct: 51  SMCYMSGSIEMENTYTPEQEVGVLQWILGKSVSSVVLRNTGQNDGFVGIAAPYLARILPI 110

Query: 62  DMAMFGGQLLCQPDAFLCSVNDVKVNNTVDPRVRNVI-TGVEGFLRQKLSGQGLAFILGG 121
           D+AMFGG++LCQPDAFLCSV+DVKV N+VD R RN++  G EGFLRQ+LSGQGLAFIL G
Sbjct: 111 DLAMFGGEILCQPDAFLCSVHDVKVVNSVDQRARNIVAAGAEGFLRQRLSGQGLAFILAG 170

Query: 122 GSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVF 181
           GSVVQK LEVGEV S+D+SCI ALT +IDV+IK N P RRA+FGGDN+V ATLTGPG+VF
Sbjct: 171 GSVVQKVLEVGEVFSIDVSCIAALTPSIDVRIKNNAPFRRALFGGDNVVMATLTGPGIVF 230

Query: 182 IQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           IQSLPF RLSQRIAR+VTSPNMRENPK  +Q+A+F FLAY VI+SS+ILT+V
Sbjct: 231 IQSLPFHRLSQRIARSVTSPNMRENPKLLIQIAIFAFLAYAVILSSLILTEV 282

[Close]

BLAST of MS000142 vs. TAIR 10
Match: AT4G17420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 351.3 bits (900), Expect = 6.0e-97
Identity = 179/236 (75.85%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMC+MSGSIEM+N Y PE EVGV  W+ GKSVSSIVLRN+G +DG++GIAAPSLARILP
Sbjct: 50  GSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTV--DPRVRNV-ITGVEGFLRQKLSGQGLAFI 120
           +D+AMFGG +LCQPDAFLCSV+DVKV NTV    R RN+   G EG LRQ+LSGQGLAFI
Sbjct: 110 LDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRHRARNIAAAGAEGVLRQRLSGQGLAFI 169

Query: 121 LGGGSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYN-GPVRRAVFGGDNLVTATLTGP 180
           + GGSVVQKNLEVGEVL++D+SCI ALT +I+ QIKYN  PVRRAVFGGDN+VTATLTGP
Sbjct: 170 IAGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGP 229

Query: 181 GMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV 233
           G+VFIQSLPF RLSQRIAR+VTSPNMRENP+  VQ+ LF FLAYVVIVSS+ILT++
Sbjct: 230 GIVFIQSLPFHRLSQRIARSVTSPNMRENPRLLVQIGLFIFLAYVVIVSSLILTEM 285

[Close]

BLAST of MS000142 vs. TAIR 10
Match: AT4G17420.3 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 301.6 bits (771), Expect = 5.5e-82
Identity = 152/210 (72.38%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMC+MSGSIEM+N Y PE EVGV  W+ GKSVSSIVLRN+G +DG++GIAAPSLARILP
Sbjct: 50  GSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTV--DPRVRNVITGVEGFLRQKLSGQGLAFIL 120
           +D+AMFGG +LCQPDAFLCSV+DVKV NTV    R RN+              +GLAFI+
Sbjct: 110 LDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRHRARNIAAA---------GAEGLAFII 169

Query: 121 GGGSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYN-GPVRRAVFGGDNLVTATLTGPG 180
            GGSVVQKNLEVGEVL++D+SCI ALT +I+ QIKYN  PVRRAVFGGDN+VTATLTGPG
Sbjct: 170 AGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPG 229

Query: 181 MVFIQSLPFQRLSQRIARAVTSPNMRENPK 208
           +VFIQSLPF RLSQRIAR+VTSPNMRENP+
Sbjct: 230 IVFIQSLPFHRLSQRIARSVTSPNMRENPR 250

[Close]

BLAST of MS000142 vs. TAIR 10
Match: AT4G17420.2 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 278.1 bits (710), Expect = 6.5e-75
Identity = 142/198 (71.72%), Postives = 163/198 (82.32%), Query Frame = 0


Query: 1   GSMCFMSGSIEMENVYLPENEVGVWHWLFGKSVSSIVLRNSGTSDGYIGIAAPSLARILP 60
           GSMC+MSGSIEM+N Y PE EVGV  W+ GKSVSSIVLRN+G +DG++GIAAPSLARILP
Sbjct: 50  GSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILP 109

Query: 61  IDMAMFGGQLLCQPDAFLCSVNDVKVNNTV--DPRVRNVITGVEGFLRQKLSGQGLAFIL 120
           +D+AMFGG +LCQPDAFLCSV+DVKV NTV    R RN+              +GLAFI+
Sbjct: 110 LDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRHRARNIAAA---------GAEGLAFII 169

Query: 121 GGGSVVQKNLEVGEVLSVDISCIVALTTTIDVQIKYN-GPVRRAVFGGDNLVTATLTGPG 180
            GGSVVQKNLEVGEVL++D+SCI ALT +I+ QIKYN  PVRRAVFGGDN+VTATLTGPG
Sbjct: 170 AGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPG 229

Query: 181 MVFIQSLPFQRLSQRIAR 196
           +VFIQSLPF RLSQRIAR
Sbjct: 230 IVFIQSLPFHRLSQRIAR 238

The following BLAST results are available for this feature:

BLAST of MS000142 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154818.1	3.2e-124	99.57	uncharacterized protein LOC111021980 [Momordica charantia]	[more]
XP_023551647.1	7.3e-121	95.69	uncharacterized protein LOC111809421 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023551646.1	7.3e-121	95.69	uncharacterized protein LOC111809421 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022922283.1	7.3e-121	95.69	uncharacterized protein LOC111430310 isoform X1 [Cucurbita moschata] >KAG6579401...	[more]
XP_022922284.1	7.3e-121	95.69	uncharacterized protein LOC111430310 isoform X2 [Cucurbita moschata]	[more]

BLAST of MS000142 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS000142 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLC0	1.5e-124	99.57	Altered inheritance of mitochondria protein 24, mitochondrial OS=Momordica chara...	[more]
A0A6J1E2Y5	3.5e-121	95.69	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita mosch...	[more]
A0A6J1E653	3.5e-121	95.69	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita mosch...	[more]
A0A6J1ID96	1.0e-120	95.26	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita maxim...	[more]
A0A6J1IBS7	1.0e-120	95.26	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita maxim...	[more]

BLAST of MS000142 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47420.1	7.1e-98	75.43	Tryptophan RNA-binding attenuator protein-like	[more]
AT4G17420.1	6.0e-97	75.85	Tryptophan RNA-binding attenuator protein-like	[more]
AT4G17420.3	5.5e-82	72.38	Tryptophan RNA-binding attenuator protein-like	[more]
AT4G17420.2	6.5e-75	71.72	Tryptophan RNA-binding attenuator protein-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002838	Mitochondrial biogenesis protein AIM24	PFAM	PF01987	AIM24	coord: 1..183 e-value: 1.9E-37 score: 129.0
IPR036983	Mitochondrial biogenesis AIM24 superfamily	GENE3D	3.60.160.10	Mitochondrial biogenesis AIM24	coord: 1..206 e-value: 1.9E-53 score: 183.1
None	No IPR available	PANTHER	PTHR43657	TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN	coord: 1..231
None	No IPR available	PANTHER	PTHR43657:SF2	TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN	coord: 1..231
IPR016031	Tryptophan RNA-binding attenuator protein-like domain superfamily	SUPERFAMILY	51219	TRAP-like	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000142.1	MS000142.1	mRNA