MELO3C035748.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C035748.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	MLO-like protein 8 isoform X1
Location	chr12: 25447110 .. 25447519 (-)
RNA-Seq Expression	MELO3C035748.jh1
Synteny	MELO3C035748.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATACTATAACGGTCATATCTCGTCGAATCGCTTTCAGAGGCGAATGTTTCCTTCTTGTTCGCAAACAAAAAATTCTCAGGCTTCAAATCTCTGTGCATAACTCCGTTAGCGTGGCACATCCTCACCACTTCTGCGATTGTTCTCGCGACGTTCGCTGCAGCACGTTCGGTGTAGTGTCCTCTCGCCACAATCGGATCGAAAAGCTTCGTAACCAGATGAACATTCTCGTTATCCTCGTAAGTCGCTTTAAGCTTCACTATATTCGGATGTTCAGGCTAATTTGACATTATAGCGACCTCTCGCCTCACATCCTCTATATCCACCGCAGTTCTCAGCTTCCTCTTCGATATCGATTTACAAGCCAAAGCCCGTTTCGTCTCTCTATCAGTACACAGATACGTGA

mRNA sequence

ATGTTGGATACTATAACGGTCATATCTCGTCGAATCGCTTTCAGAGGCGAATGTTTCCTTCTTGTTCGCAAACAAAAAATTCTCAGGCTTCAAATCTCTGTGCATAACTCCGTTAGCGTGGCACATCCTCACCACTTCTGCGATTGTTCTCGCGACGTTCGCTGCAGCACGTTCGGTGTAGTGTCCTCTCGCCACAATCGGATCGAAAAGCTTCGTAACCAGATGAACATTCTCGTTATCCTCCGACCTCTCGCCTCACATCCTCTATATCCACCGCAGTTCTCAGCTTCCTCTTCGATATCGATTTACAAGCCAAAGCCCGTTTCGTCTCTCTATCAGTACACAGATACGTGA

Coding sequence (CDS)

ATGTTGGATACTATAACGGTCATATCTCGTCGAATCGCTTTCAGAGGCGAATGTTTCCTTCTTGTTCGCAAACAAAAAATTCTCAGGCTTCAAATCTCTGTGCATAACTCCGTTAGCGTGGCACATCCTCACCACTTCTGCGATTGTTCTCGCGACGTTCGCTGCAGCACGTTCGGTGTAGTGTCCTCTCGCCACAATCGGATCGAAAAGCTTCGTAACCAGATGAACATTCTCGTTATCCTCCGACCTCTCGCCTCACATCCTCTATATCCACCGCAGTTCTCAGCTTCCTCTTCGATATCGATTTACAAGCCAAAGCCCGTTTCGTCTCTCTATCAGTACACAGATACGTGA

Protein sequence

MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGVVSSRHNRIEKLRNQMNILVILRPLASHPLYPPQFSASSSISIYKPKPVSSLYQYTDT

Homology

[Close]

BLAST of MELO3C035748.jh1 vs. NCBI nr
Match: TYJ99114.1 (MLO-like protein 8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 200 bits (508), Expect = 4.25e-63
Identity = 105/117 (89.74%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV 60
           MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV
Sbjct: 1   MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV 60

Query: 61  VSSRHNRIEKLRNQMNILVILRPLASHPLYPPQFSASSSISIYKPKPVSSLYQYTDT 117
           VSSRHNRIEKLRNQMNILVIL            FSASSSISIYKPKPVSSLYQYTDT
Sbjct: 61  VSSRHNRIEKLRNQMNILVIL------------FSASSSISIYKPKPVSSLYQYTDT 105

[Close]

BLAST of MELO3C035748.jh1 vs. NCBI nr
Match: KAA0064531.1 (MLO-like protein 8 [Cucumis melo var. makuwa] >TYK20059.1 MLO-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.13e-14
Identity = 49/78 (62.82%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 19 FLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGVVSSRHNRIEKL------R 78
          FLLVRKQKIL LQISVH S SV     F DCSRDVRCS+FGVV SR+N IEKL       
Sbjct: 2  FLLVRKQKILTLQISVHKSFSVT----FGDCSRDVRCSSFGVVPSRYNPIEKLVSLTKLH 61

Query: 79 NQMNILVILRPLASHPLY 90
          N MNI+VI  P++   LY
Sbjct: 62 NLMNIIVI--PVSRFKLY 73

[Close]

BLAST of MELO3C035748.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BJ61 (MLO-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003190 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.06e-63
Identity = 105/117 (89.74%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV 60
           MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV
Sbjct: 1   MLDTITVISRRIAFRGECFLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGV 60

Query: 61  VSSRHNRIEKLRNQMNILVILRPLASHPLYPPQFSASSSISIYKPKPVSSLYQYTDT 117
           VSSRHNRIEKLRNQMNILVIL            FSASSSISIYKPKPVSSLYQYTDT
Sbjct: 61  VSSRHNRIEKLRNQMNILVIL------------FSASSSISIYKPKPVSSLYQYTDT 105

[Close]

BLAST of MELO3C035748.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VFQ7 (MLO-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001810 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.48e-15
Identity = 49/78 (62.82%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 19 FLLVRKQKILRLQISVHNSVSVAHPHHFCDCSRDVRCSTFGVVSSRHNRIEKL------R 78
          FLLVRKQKIL LQISVH S SV     F DCSRDVRCS+FGVV SR+N IEKL       
Sbjct: 2  FLLVRKQKILTLQISVHKSFSVT----FGDCSRDVRCSSFGVVPSRYNPIEKLVSLTKLH 61

Query: 79 NQMNILVILRPLASHPLY 90
          N MNI+VI  P++   LY
Sbjct: 62 NLMNIIVI--PVSRFKLY 73

The following BLAST results are available for this feature:

BLAST of MELO3C035748.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99114.1	4.25e-63	89.74	MLO-like protein 8 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0064531.1	1.13e-14	62.82	MLO-like protein 8 [Cucumis melo var. makuwa] >TYK20059.1 MLO-like protein 8 [Cu...	[more]

BLAST of MELO3C035748.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C035748.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ61	2.06e-63	89.74	MLO-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7VFQ7	5.48e-15	62.82	MLO-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G0...	[more]

BLAST of MELO3C035748.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035748.jh1.t1	MELO3C035748.jh1.t1	mRNA