MELO3C035651 (gene) Melon (DHL92) v4

Overview
NameMELO3C035651
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionvacuolar protein 8
Locationchr12: 15663342 .. 15664941 (-)
RNA-Seq ExpressionMELO3C035651
SyntenyMELO3C035651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCTGCTGGTGCTGGTTTGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTATTGGAAAGCCTTGGGCGTGGTAAAATCTGGGGTGTCTTTGCTAGATCTTAGCCCATCAAGGAGGCAATTTTCCAAAATTCTGTTTATTGTATAGGAACAGAAGCATGATTCGCTGTATGTACAATATATGTTTGTATATTCTTAGTTTTAATGGGTGTTGATTTTTAGTTTACAAGTTAATAATCTTTTTATCTGTTCTTATGTGGTAGAAATGTCAAAATGCTGCACCATGCCAGCTGAATTTGAGCATCACTTTACAGACACGATCTAGGTTTGATGACCCAACTTGATTTTGATTCTGTGATCATTACTGGAAACTTCATTGTCCAATAATCGAATGACACACCTTTCAATTATTTTAGGAAATGACACACCTTTCAATTATTTTAGGAAATGTTCTCTATAATTTTAGATTTTGCAGCTGTTATATTATTCTAATGAAGAAAATAAACTTTCGAGGATGAATTTTTGTTTTCCATTTAACTGATGGAGAAGGTTGGAAGGCCTGCTCTGAGTCTTCTTTGATAATAAATTATAGTATGTATCTTTTATTCCATTATTTGGTCTTGGTAATCCTAGAAATTTAGAAGACCACCCTTCTCAATTCTTCTATATATATTTCAAACAAAATTATTGGGGTAGGTTTCTGATTGCCTTTTCTGTTGTCAATTATGTAAGTATCTTATTTACAGCACTTTTCTTACCTTCTCATCATTTGCAGTTTAGAATATAAGAATAATTGTATGCCATTTTAACATTATTGATCCAATATATGCTTATTTTGGTGATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGCTAAGCATGTGCTTTGTTCACTGATTAAGGCAGGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGGTAAGGGTCCTACCAAACTCTTGGCCCATTCCACCCATTTGCTCTGTTGACTGACCTAAGCTAAGCTCATTAGTTTATTTTATATGCTCTCAATCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCTGAAGATACCTTTTTTTTTATTTTTGAAGCAGTAAACAAATTACTGTTTATTTCCTATGTTCTTAGCTTTATAATGGATTTGACTTGACCAAATATATACTTGAGTAGTGAGAACGAAATGGATTAGAAGGTCAGAACTTTTGGGCAAATTATGGGTTTTCCTTTTTCCCTGCCCAGTCCCTTTTGTAGCCAAGCTGGTTTCATGATGAAATTACGAATTAGTGACTAGTAGAGTATCTAATCATGAAAGCTGTCCAAAACATGAATTTACACTCCGCCATTTGTGAGAGAGGGGCCGTTTTATCTTACAATTAAGATTTAGAGAACGAGTAGCAAAAACATTCTTAGACTCTCTAGTCTAATCAATCAGCCTTAAGACGACGCTTGGGACAACAACTAAGCAAATGGTGGATGCTTCTTCTTTGCTGTTTTATCAACACGGTATCGTAGAGAAGAGATTAACGTTAATGGCTAAAGGGAGCTAA

mRNA sequence

ATGGTTGCTGCTGGTGCTGGTTTGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTATTGGAAAGCCTTGGGCGTGGTAAAATCTGGGGTGAACAGAAGCATGATTCGCTGTATAAATGTCAAAATGCTGCACCATGCCAGCTGAATTTGAGCATCACTTTACAGACACGATCTAGCCTTAAGACGACGCTTGGGACAACAACTAAGCAAATGGTGGATGCTTCTTCTTTGCTGTTTTATCAACACGGTATCGTAGAGAAGAGATTAACGTTAATGGCTAAAGGGAGCTAA

Coding sequence (CDS)

ATGGTTGCTGCTGGTGCTGGTTTGTATCTACAAAAGCTTGTTGAAATGAATGTTGAGGGGTCAAAGAAGCTATTGGAAAGCCTTGGGCGTGGTAAAATCTGGGGTGAACAGAAGCATGATTCGCTGTATAAATGTCAAAATGCTGCACCATGCCAGCTGAATTTGAGCATCACTTTACAGACACGATCTAGCCTTAAGACGACGCTTGGGACAACAACTAAGCAAATGGTGGATGCTTCTTCTTTGCTGTTTTATCAACACGGTATCGTAGAGAAGAGATTAACGTTAATGGCTAAAGGGAGCTAA

Protein sequence

MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWGEQKHDSLYKCQNAAPCQLNLSITLQTRSSLKTTLGTTTKQMVDASSLLFYQHGIVEKRLTLMAKGS
Homology
[Close]
BLAST of MELO3C035651 vs. NCBI nr
Match: XP_008458985.1 (PREDICTED: vacuolar protein 8 [Cucumis melo] >KAA0054293.1 vacuolar protein 8 [Cucumis melo var. makuwa] >TYK12330.1 vacuolar protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. NCBI nr
Match: XP_004145464.1 (vacuolar protein 8 [Cucumis sativus] >KGN66829.1 hypothetical protein Csa_006888 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYLQKLVE+NVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLQKLVEINVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. NCBI nr
Match: XP_038895178.1 (vacuolar protein 8 [Benincasa hispida] >XP_038895179.1 vacuolar protein 8 [Benincasa hispida] >XP_038895180.1 vacuolar protein 8 [Benincasa hispida])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYL+KLVEMNVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLRKLVEMNVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. NCBI nr
Match: KAA0040583.1 (vacuolar protein 8 [Cucumis melo var. makuwa] >TYK05625.1 vacuolar protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 8.1e-08
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 1  MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
          MVAAGAGLYLQ LVEMNVEG KKLLESLGRGKIWG
Sbjct: 61 MVAAGAGLYLQNLVEMNVEGLKKLLESLGRGKIWG 95

[Close]
BLAST of MELO3C035651 vs. NCBI nr
Match: KAG7012332.1 (U-box domain-containing protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           M AAGAGLYLQKLVEMNV+GSKKLLE LGRGKIWG
Sbjct: 512 MAAAGAGLYLQKLVEMNVDGSKKLLECLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match: A0A5A7UE60 (Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001020 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match: A0A1S3C8N4 (vacuolar protein 8 OS=Cucumis melo OX=3656 GN=LOC103498236 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match: A0A0A0M0M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699580 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-09
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           MVAAGAGLYLQKLVE+NVEGSKKLLESLGRGKIWG
Sbjct: 512 MVAAGAGLYLQKLVEINVEGSKKLLESLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match: A0A5A7TBY1 (Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00850 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 1  MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
          MVAAGAGLYLQ LVEMNVEG KKLLESLGRGKIWG
Sbjct: 61 MVAAGAGLYLQNLVEMNVEGLKKLLESLGRGKIWG 95

[Close]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match: A0A6J1K4Z6 (vacuolar protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490111 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-08
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           M AAGAGLYLQKLVEMNV+GSKKLLE LGRGKIWG
Sbjct: 512 MAAAGAGLYLQKLVEMNVDGSKKLLECLGRGKIWG 546

[Close]
BLAST of MELO3C035651 vs. TAIR 10
Match: AT5G50900.1 (ARM repeat superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-07
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 1   MVAAGAGLYLQKLVEMNVEGSKKLLESLGRGKIWG 36
           +VAAGA L+LQKLV+M+ EG+KKL E+L R KIWG
Sbjct: 516 VVAAGACLHLQKLVDMDTEGAKKLAENLSRSKIWG 550

The following BLAST results are available for this feature:
BLAST of MELO3C035651 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035651 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458985.14.3e-09100.00PREDICTED: vacuolar protein 8 [Cucumis melo] >KAA0054293.1 vacuolar protein 8 [C... [more]
XP_004145464.11.2e-0897.14vacuolar protein 8 [Cucumis sativus] >KGN66829.1 hypothetical protein Csa_006888... [more]
XP_038895178.11.2e-0897.14vacuolar protein 8 [Benincasa hispida] >XP_038895179.1 vacuolar protein 8 [Benin... [more]
KAA0040583.18.1e-0894.29vacuolar protein 8 [Cucumis melo var. makuwa] >TYK05625.1 vacuolar protein 8 [Cu... [more]
KAG7012332.11.1e-0791.43U-box domain-containing protein 11, partial [Cucurbita argyrosperma subsp. argyr... [more]
BLAST of MELO3C035651 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UE602.1e-09100.00Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G0... [more]
A0A1S3C8N42.1e-09100.00vacuolar protein 8 OS=Cucumis melo OX=3656 GN=LOC103498236 PE=4 SV=1[more]
A0A0A0M0M76.0e-0997.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699580 PE=4 SV=1[more]
A0A5A7TBY13.9e-0894.29Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00... [more]
A0A6J1K4Z65.1e-0891.43vacuolar protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490111 PE=4 SV=1[more]
BLAST of MELO3C035651 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G50900.15.6e-0768.57ARM repeat superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035651.1MELO3C035651.1mRNA