MELO3C035489 (gene) Melon (DHL92) v4

Overview
NameMELO3C035489
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProline-rich protein HaeIII subfamily 1-like
Locationchr10: 9226226 .. 9226865 (-)
RNA-Seq ExpressionMELO3C035489
SyntenyMELO3C035489
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATCA

mRNA sequence

ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATCA

Coding sequence (CDS)

ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATC

Protein sequence

MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRFSWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDVRAPPSGSSQRTLDNNPSPPSHALPIILHKESRI
Homology
BLAST of MELO3C035489 vs. NCBI nr
Match: KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa])

HSP 1 Score: 397.1 bits (1019), Expect = 9.4e-107
Identity = 187/213 (87.79%), Postives = 198/213 (92.96%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMS SSNVLF  CALILLGLHFETY +DARSFS+  EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 8   MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
           SWPKPKRVPDLAPPFSLGILTKD+LTPPSENELGDNIVKHPKSHIRFSW+WP+PKRVPDL
Sbjct: 68  SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127

Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
           APPFSLGI++NHLR PP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187

Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
           R PP GSSQRTLD NPSPP HA+PIILHK+S+I
Sbjct: 188 RTPPFGSSQRTLD-NPSPPPHAVPIILHKKSKI 219

BLAST of MELO3C035489 vs. NCBI nr
Match: KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 188/213 (88.26%), Postives = 198/213 (92.96%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMS SSNVLF  CALILLG HFETY +DAR FS+V EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 1   MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
           SWPKPKRVPDLAPPFSLGILTKDVLTPPSENE+GDNIVKHPK+HIRFSWIWP+PKRVPDL
Sbjct: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120

Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
           APPFSLGI++NHLRTPP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180

Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
           R PPSGSSQRTLD NPS P H +PIILHK+SRI
Sbjct: 181 RTPPSGSSQRTLD-NPSLPPHVVPIILHKKSRI 212

BLAST of MELO3C035489 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-27
Identity = 84/211 (39.81%), Postives = 106/211 (50.24%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           M+S+ +N+ F  CALI LGLHFE Y  +A+   +V E N  +EN L   +I HPK+   F
Sbjct: 1   MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDN----------IVKHPKSHIRFSWI 120
           SWPKPK++PDLAPPFSLGIL+K + TPPS    G +          I+ H +S + F  I
Sbjct: 61  SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVNFG-I 120

Query: 121 WPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPP 180
            P+  R+P   P             PPL N               F   K  R+      
Sbjct: 121 LPKGVRIPPSGPS-----RRTSDPPPPLSN---------------FHSIKESRI------ 180

Query: 181 FSLGILSKDVRAPPSGSSQRTLDNNPSPPSH 202
              GIL K VR PPSG S+R  D  P PP H
Sbjct: 181 -KYGILPKGVRIPPSGPSKRNSDYYPPPPMH 183

BLAST of MELO3C035489 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-25
Identity = 86/218 (39.45%), Postives = 111/218 (50.92%), Query Frame = 0

Query: 1   MMSIS-SNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIR 60
           M+SIS SNV F  CA I LGLH   YQ DA++  +V +G+  +EN+L+D  I+HPKRHI 
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSWPKPKRVPDLAPPFSLGILTKDVLTPPS--ENELGDN---------IVKHPKSHIRFS 120
           FS  K KR+PDLAPPF+LGIL+K+   PPS       DN         I+ H +S I F 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 WIWPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLA 180
            +  +  R+P   P       S      P       S+  H K                 
Sbjct: 121 -VLSKGNRIPPSGP-------SQRTSESPPPPPHALSVILHKK----------------- 180

Query: 181 PPFSLGILSKDVRAPPSGSSQRTLDNNPSPPSHALPII 207
           P  + GIL K +  PPSG S+R   N PSPP+HA  +I
Sbjct: 181 PGINFGILPKSMHIPPSGPSKR-FSNYPSPPTHAPSVI 192

BLAST of MELO3C035489 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-18
Identity = 73/200 (36.50%), Postives = 94/200 (47.00%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMSISSN+ F  CA++LLGLHF  YQ + R+   V E N V EN+L  + I HPK++I F
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPS-ENELGDNIVKHPKSHIRFSWIWPRPKRVPD 120
           S  K K  P+    F  GI +KDV  PPS  ++   +    P      S I P+  R+  
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP------SMILPKESRI-- 120

Query: 121 LAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKD 180
                + GI+    R PP            P +    S   P            G+L K 
Sbjct: 121 -----NFGILPKGSRIPP----------SGPSQRFSDSPLPPSTFLHKGSNMIFGMLPKG 177

Query: 181 VRAPPSGSSQRTLDNNPSPP 200
              PPSG S+RT DN P PP
Sbjct: 181 HHIPPSGPSKRTSDNPPPPP 177

BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.5e-107
Identity = 187/213 (87.79%), Postives = 198/213 (92.96%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMS SSNVLF  CALILLGLHFETY +DARSFS+  EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 8   MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
           SWPKPKRVPDLAPPFSLGILTKD+LTPPSENELGDNIVKHPKSHIRFSW+WP+PKRVPDL
Sbjct: 68  SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127

Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
           APPFSLGI++NHLR PP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187

Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
           R PP GSSQRTLD NPSPP HA+PIILHK+S+I
Sbjct: 188 RTPPFGSSQRTLD-NPSPPPHAVPIILHKKSKI 219

BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 188/213 (88.26%), Postives = 198/213 (92.96%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMS SSNVLF  CALILLG HFETY +DAR FS+V EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 1   MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
           SWPKPKRVPDLAPPFSLGILTKDVLTPPSENE+GDNIVKHPK+HIRFSWIWP+PKRVPDL
Sbjct: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120

Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
           APPFSLGI++NHLRTPP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180

Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
           R PPSGSSQRTLD NPS P H +PIILHK+SRI
Sbjct: 181 RTPPSGSSQRTLD-NPSLPPHVVPIILHKKSRI 212

BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-27
Identity = 84/211 (39.81%), Postives = 106/211 (50.24%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           M+S+ +N+ F  CALI LGLHFE Y  +A+   +V E N  +EN L   +I HPK+   F
Sbjct: 1   MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDN----------IVKHPKSHIRFSWI 120
           SWPKPK++PDLAPPFSLGIL+K + TPPS    G +          I+ H +S + F  I
Sbjct: 61  SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVNFG-I 120

Query: 121 WPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPP 180
            P+  R+P   P             PPL N               F   K  R+      
Sbjct: 121 LPKGVRIPPSGPS-----RRTSDPPPPLSN---------------FHSIKESRI------ 180

Query: 181 FSLGILSKDVRAPPSGSSQRTLDNNPSPPSH 202
              GIL K VR PPSG S+R  D  P PP H
Sbjct: 181 -KYGILPKGVRIPPSGPSKRNSDYYPPPPMH 183

BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 73/200 (36.50%), Postives = 94/200 (47.00%), Query Frame = 0

Query: 1   MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
           MMSISSN+ F  CA++LLGLHF  YQ + R+   V E N V EN+L  + I HPK++I F
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 61  SWPKPKRVPDLAPPFSLGILTKDVLTPPS-ENELGDNIVKHPKSHIRFSWIWPRPKRVPD 120
           S  K K  P+    F  GI +KDV  PPS  ++   +    P      S I P+  R+  
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP------SMILPKESRI-- 120

Query: 121 LAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKD 180
                + GI+    R PP            P +    S   P            G+L K 
Sbjct: 121 -----NFGILPKGSRIPP----------SGPSQRFSDSPLPPSTFLHKGSNMIFGMLPKG 177

Query: 181 VRAPPSGSSQRTLDNNPSPP 200
              PPSG S+RT DN P PP
Sbjct: 181 HHIPPSGPSKRTSDNPPPPP 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037987.19.4e-10787.79hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa][more]
KAA0038012.12.1e-10688.26hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... [more]
KAA0040932.13.3e-2739.81proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
XP_038882352.11.4e-2539.45uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAA0043502.13.7e-1836.50proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T8R04.5e-10787.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVE51.0e-10688.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CGG11.6e-2739.81Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BP861.8e-1836.50Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035489.1MELO3C035489.1mRNA