Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATCA
mRNA sequence
ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATCA
Coding sequence (CDS)
ATGATGTCTATTAGCTCCAATGTGCTTTTTGTAGTCTGTGCTCTCATACTCCTTGGATTGCACTTTGAAACGTACCAAGTAGATGCTAGGAGCTTCTCTCTCGTCAGTGAAGGCAACTATGTTGTGGAAAACCAATTGACAGACCACGTTATTGAGCACCCAAAGAGGCATATCCGTTTCTCATGGCCGAAACCCAAGAGAGTACCAGACTTAGCCCCACCTTTCAGTCTGGGAATACTAACCAAAGACGTGCTTACTCCTCCCTCAGAAAATGAACTGGGGGACAACATTGTAAAGCATCCAAAAAGCCATATTCGGTTCTCTTGGATTTGGCCGAGACCCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATAATGTCGAACCACTTACGAACTCCTCCTTTAGAAAATGAATTGGGGCGCAGCATCACAAAGCATCCCAAACGGCATATTCGTTTCTCATGGCCGAAGCCCAAGAGAGTACCTGACTTGGCTCCACCATTTAGCTTGGGAATTCTGTCGAAAGACGTACGTGCGCCTCCGTCAGGGTCGAGTCAAAGAACTTTGGACAATAACCCATCTCCCCCATCGCATGCCCTACCAATCATTTTACATAAGGAATCTAGAATC
Protein sequence
MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRFSWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDVRAPPSGSSQRTLDNNPSPPSHALPIILHKESRI
Homology
BLAST of MELO3C035489 vs. NCBI nr
Match:
KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa])
HSP 1 Score: 397.1 bits (1019), Expect = 9.4e-107
Identity = 187/213 (87.79%), Postives = 198/213 (92.96%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMS SSNVLF CALILLGLHFETY +DARSFS+ EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 8 MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
SWPKPKRVPDLAPPFSLGILTKD+LTPPSENELGDNIVKHPKSHIRFSW+WP+PKRVPDL
Sbjct: 68 SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127
Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
APPFSLGI++NHLR PP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187
Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
R PP GSSQRTLD NPSPP HA+PIILHK+S+I
Sbjct: 188 RTPPFGSSQRTLD-NPSPPPHAVPIILHKKSKI 219
BLAST of MELO3C035489 vs. NCBI nr
Match:
KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 188/213 (88.26%), Postives = 198/213 (92.96%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMS SSNVLF CALILLG HFETY +DAR FS+V EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 1 MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
SWPKPKRVPDLAPPFSLGILTKDVLTPPSENE+GDNIVKHPK+HIRFSWIWP+PKRVPDL
Sbjct: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120
Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
APPFSLGI++NHLRTPP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
R PPSGSSQRTLD NPS P H +PIILHK+SRI
Sbjct: 181 RTPPSGSSQRTLD-NPSLPPHVVPIILHKKSRI 212
BLAST of MELO3C035489 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 132.9 bits (333), Expect = 3.3e-27
Identity = 84/211 (39.81%), Postives = 106/211 (50.24%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
M+S+ +N+ F CALI LGLHFE Y +A+ +V E N +EN L +I HPK+ F
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDN----------IVKHPKSHIRFSWI 120
SWPKPK++PDLAPPFSLGIL+K + TPPS G + I+ H +S + F I
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVNFG-I 120
Query: 121 WPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPP 180
P+ R+P P PPL N F K R+
Sbjct: 121 LPKGVRIPPSGPS-----RRTSDPPPPLSN---------------FHSIKESRI------ 180
Query: 181 FSLGILSKDVRAPPSGSSQRTLDNNPSPPSH 202
GIL K VR PPSG S+R D P PP H
Sbjct: 181 -KYGILPKGVRIPPSGPSKRNSDYYPPPPMH 183
BLAST of MELO3C035489 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 127.5 bits (319), Expect = 1.4e-25
Identity = 86/218 (39.45%), Postives = 111/218 (50.92%), Query Frame = 0
Query: 1 MMSIS-SNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIR 60
M+SIS SNV F CA I LGLH YQ DA++ +V +G+ +EN+L+D I+HPKRHI
Sbjct: 1 MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60
Query: 61 FSWPKPKRVPDLAPPFSLGILTKDVLTPPS--ENELGDN---------IVKHPKSHIRFS 120
FS K KR+PDLAPPF+LGIL+K+ PPS DN I+ H +S I F
Sbjct: 61 FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120
Query: 121 WIWPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLA 180
+ + R+P P S P S+ H K
Sbjct: 121 -VLSKGNRIPPSGP-------SQRTSESPPPPPHALSVILHKK----------------- 180
Query: 181 PPFSLGILSKDVRAPPSGSSQRTLDNNPSPPSHALPII 207
P + GIL K + PPSG S+R N PSPP+HA +I
Sbjct: 181 PGINFGILPKSMHIPPSGPSKR-FSNYPSPPTHAPSVI 192
BLAST of MELO3C035489 vs. NCBI nr
Match:
KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 102.8 bits (255), Expect = 3.7e-18
Identity = 73/200 (36.50%), Postives = 94/200 (47.00%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMSISSN+ F CA++LLGLHF YQ + R+ V E N V EN+L + I HPK++I F
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPS-ENELGDNIVKHPKSHIRFSWIWPRPKRVPD 120
S K K P+ F GI +KDV PPS ++ + P S I P+ R+
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP------SMILPKESRI-- 120
Query: 121 LAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKD 180
+ GI+ R PP P + S P G+L K
Sbjct: 121 -----NFGILPKGSRIPP----------SGPSQRFSDSPLPPSTFLHKGSNMIFGMLPKG 177
Query: 181 VRAPPSGSSQRTLDNNPSPP 200
PPSG S+RT DN P PP
Sbjct: 181 HHIPPSGPSKRTSDNPPPPP 177
BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 4.5e-107
Identity = 187/213 (87.79%), Postives = 198/213 (92.96%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMS SSNVLF CALILLGLHFETY +DARSFS+ EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 8 MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
SWPKPKRVPDLAPPFSLGILTKD+LTPPSENELGDNIVKHPKSHIRFSW+WP+PKRVPDL
Sbjct: 68 SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127
Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
APPFSLGI++NHLR PP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187
Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
R PP GSSQRTLD NPSPP HA+PIILHK+S+I
Sbjct: 188 RTPPFGSSQRTLD-NPSPPPHAVPIILHKKSKI 219
BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 188/213 (88.26%), Postives = 198/213 (92.96%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMS SSNVLF CALILLG HFETY +DAR FS+V EGNYV+ENQLTDHVIEHPKRHIRF
Sbjct: 1 MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDNIVKHPKSHIRFSWIWPRPKRVPDL 120
SWPKPKRVPDLAPPFSLGILTKDVLTPPSENE+GDNIVKHPK+HIRFSWIWP+PKRVPDL
Sbjct: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120
Query: 121 APPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
APPFSLGI++NHLRTPP ENELG SITKHPK HIRFSWPKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
Query: 181 RAPPSGSSQRTLDNNPSPPSHALPIILHKESRI 214
R PPSGSSQRTLD NPS P H +PIILHK+SRI
Sbjct: 181 RTPPSGSSQRTLD-NPSLPPHVVPIILHKKSRI 212
BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.6e-27
Identity = 84/211 (39.81%), Postives = 106/211 (50.24%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
M+S+ +N+ F CALI LGLHFE Y +A+ +V E N +EN L +I HPK+ F
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENELGDN----------IVKHPKSHIRFSWI 120
SWPKPK++PDLAPPFSLGIL+K + TPPS G + I+ H +S + F I
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVNFG-I 120
Query: 121 WPRPKRVPDLAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPP 180
P+ R+P P PPL N F K R+
Sbjct: 121 LPKGVRIPPSGPS-----RRTSDPPPPLSN---------------FHSIKESRI------ 180
Query: 181 FSLGILSKDVRAPPSGSSQRTLDNNPSPPSH 202
GIL K VR PPSG S+R D P PP H
Sbjct: 181 -KYGILPKGVRIPPSGPSKRNSDYYPPPPMH 183
BLAST of MELO3C035489 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 73/200 (36.50%), Postives = 94/200 (47.00%), Query Frame = 0
Query: 1 MMSISSNVLFVVCALILLGLHFETYQVDARSFSLVSEGNYVVENQLTDHVIEHPKRHIRF 60
MMSISSN+ F CA++LLGLHF YQ + R+ V E N V EN+L + I HPK++I F
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPS-ENELGDNIVKHPKSHIRFSWIWPRPKRVPD 120
S K K P+ F GI +KDV PPS ++ + P S I P+ R+
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP------SMILPKESRI-- 120
Query: 121 LAPPFSLGIMSNHLRTPPLENELGRSITKHPKRHIRFSWPKPKRVPDLAPPFSLGILSKD 180
+ GI+ R PP P + S P G+L K
Sbjct: 121 -----NFGILPKGSRIPP----------SGPSQRFSDSPLPPSTFLHKGSNMIFGMLPKG 177
Query: 181 VRAPPSGSSQRTLDNNPSPP 200
PPSG S+RT DN P PP
Sbjct: 181 HHIPPSGPSKRTSDNPPPPP 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0037987.1 | 9.4e-107 | 87.79 | hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa] | [more] |
KAA0038012.1 | 2.1e-106 | 88.26 | hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... | [more] |
KAA0040932.1 | 3.3e-27 | 39.81 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
XP_038882352.1 | 1.4e-25 | 39.45 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAA0043502.1 | 3.7e-18 | 36.50 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T8R0 | 4.5e-107 | 87.79 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVE5 | 1.0e-106 | 88.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CGG1 | 1.6e-27 | 39.81 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3BP86 | 1.8e-18 | 36.50 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |