
MELO3C035409 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAATATATTTATGCTATTACGTAATTATTGTGTAGGATGGAATGATAACATTAAAAAGCACTTCATCACAAGAAGGGAGTGAACCTCTTCTAGAAGGGGAAAGAACAAGGTTGGGGACCAAGACCTAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACAAAAGAAACTGATAAGATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAGCATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTATTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATAA TAGAATATATTTATGCTATTACGTAATTATTGTGTAGGATGGAATGATAACATTAAAAAGCACTTCATCACAAGAAGGGAGTGAACCTCTTCTAGAAGGGGAAAGAACAAGGTTGGGGACCAAGACCTAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACAAAAGAAACTGATAAGATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAGCATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTATTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATAA ATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAGCATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTATTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATA MLNSEAYTNSNEEENETHAGNSWESIQSQTNQEAIIITQGSMIKARAKRFQDELNACLQARFSVFNKELELQESLGHPRII Homology
BLAST of MELO3C035409 vs. NCBI nr
Match: TYK15114.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa]) HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29 Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409 vs. NCBI nr
Match: KAA0065903.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29 Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409 vs. NCBI nr
Match: TYK19543.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MELO3C035409 vs. NCBI nr
Match: KAA0036753.1 (hypothetical protein E6C27_scaffold20G00320 [Cucumis melo var. makuwa] >TYJ95820.1 hypothetical protein E5676_scaffold110G001050 [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 4.8e-11 Identity = 47/78 (60.26%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of MELO3C035409 vs. NCBI nr
Match: TYK14528.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 8.5e-08 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of MELO3C035409 vs. ExPASy TrEMBL
Match: A0A5D3CW05 (Zinc finger, CCHC-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00430 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409 vs. ExPASy TrEMBL
Match: A0A5A7VCL9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00820 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 70/81 (86.42%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409 vs. ExPASy TrEMBL
Match: A0A5D3D7R5 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00380 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MELO3C035409 vs. ExPASy TrEMBL
Match: A0A5D3B744 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001050 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11 Identity = 47/78 (60.26%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of MELO3C035409 vs. ExPASy TrEMBL
Match: A0A5D3CTJ1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00060 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.1e-08 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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