MELO3C035344 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035344
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr10: 8244461 .. 8245537 (+)
RNA-Seq Expression	MELO3C035344
Synteny	MELO3C035344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCCTTTGTTGGGACCATGAGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAACAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTGATATGATCTTGAAGATTTTCAAGGAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGGAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTAAGGGGGGTAATTGAAGGGGTAAAAGAGACAAGCTTTGAACAACCAAATCAGTGGGTAGAGAATAGCATAGAATTAAAAAAGAAAAATCGACTGCTAGAGCAAAAGGACAAGAAACTTCGTAAAGATACAAATCAATGGATGGATCATGCAACCTATTTGCAGAAAGAACTTGAAAAGACCAAGAGTTTCTTAAGAAATCAAAGTTAGTTAGAAAATAATCTTGAGGCGTTAGATAAGGAGATGAGACGATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATTCATCAATTAGAAGATGGGAAGCACAGATACTAGATTTGGAAGCACACAATCATTCTCTGCATCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTCTCAACTTACTGCATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGATGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAACGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTAATCT

mRNA sequence

ATCTAACATATCCAAGTTATGAGGCTTGGGTGTATTTCTTTGCAAAAATGACTTATGAAAATGTCATATGGAAGGCTCAATGGAAGCCTTTGAAGGCGGTGATATACAAATGTGGAAATTTTCATAGTGTCCCTTTGTTGGGACCATGAGGAGGTGTTAACTATACACCATTGTTAATTTTGTGTCAGGTGTGGCTCAAACAATTTATACCACCAACTCATAATCTATAATAGTCTGACTTTTGATATGATCTTGAAGATTTTCAAGGAAAAAAAACGTCGAGTAGTATGCACATGGAAATCTATGAGGAAGATAAAAGACAAAGGACACTACAAAGGAGTTATGAGTGGGTACGAGGCATGACAGGAAAATAGAATGAAGAATATAATAGTTAGCTTAAGGGGGGTAATTGAAGGGGTAAAAGAGACAAGCTTTGAACAACCAAATCAGTGGGTAGAGAATAGCATAGAATTAAAAAAGAAAAATCGACTGCTAGAGCAAAAGGACAAGAAACTTCGTAAAGATACAAATCAATGGATGGATCATGCAACCTATTTGCAGAAAGAACTTGAAAAGACCAAGAGTTTCTTAAGAAATCAAAGTTAGTTAGAAAATAATCTTGAGGCGTTAGATAAGGAGATGAGACGATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATTCATCAATTAGAAGATGGGAAGCACAGATACTAGATTTGGAAGCACACAATCATTCTCTGCATCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTCTCAACTTACTGCATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGATGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAACGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTAATCT

Coding sequence (CDS)

ATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATTCATCAATTAGAAGATGGGAAGCACAGATACTAGATTTGGAAGCACACAATCATTCTCTGCATCAAAGTATTAATAGCATACATGTGAAGATGGCTGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGTCGATTCCTTACACTCTCAACTTACTGCATTTCAAAATTCAAATGAGAGGATAGTGCAGGAATATGAGTCATTAAAGATGGATTATGTACAAATGAAGGTTTATTATGATATACAAATGAGAGATTTTCAGGTGCTAATGGAACATGTAGATCAAACGATTGAATTTCTCAGAATGACATCCATAAGAGCAAATGGTTTGCAGAATTGGCAGCTAATC

Protein sequence

MNKANRSLKNLESGKEYFLELVNDLNSSIRRWEAQILDLEAHNHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQMKVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNWQLI

Homology

[Close]

BLAST of MELO3C035344 vs. NCBI nr
Match: TYK23632.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-48
Identity = 109/158 (68.99%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANR LKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 132 MNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 191

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSLHQ+++S+H+KMAERSEEYEILKNYVDSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 192 NHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 251

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 252 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289

[Close]

BLAST of MELO3C035344 vs. NCBI nr
Match: TYK18656.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 108/158 (68.35%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 180 MNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 239

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+++++H+KMAERSEEYEILKNYVDSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 240 NHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 299

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 300 KVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337

[Close]

BLAST of MELO3C035344 vs. NCBI nr
Match: KAA0037780.1 (girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 3.3e-47
Identity = 108/158 (68.35%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 139 MNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDLEAQ 198

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+I+++H+KMAERSEEYEILKNY DSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 199 NHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDYVQM 258

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 259 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296

[Close]

BLAST of MELO3C035344 vs. NCBI nr
Match: KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-46
Identity = 106/158 (67.09%), Postives = 119/158 (75.32%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLE VNDLN+SI + E QI+DLEA 
Sbjct: 155 MNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 214

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNYV+SLH QLTA QNS+ RI QEYESL  DYVQM
Sbjct: 215 NHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQM 274

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 275 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312

[Close]

BLAST of MELO3C035344 vs. NCBI nr
Match: TYK23955.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-45
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LESGKEYFLE VNDL++SI   E QI+DLEAH
Sbjct: 263 MNKANRSLKNEKTTLKATVGSEDEYIKDLESGKEYFLEFVNDLHTSIGIRETQIMDLEAH 322

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q ++S+H+KM ERSEEYEILKNY DSLH QL AFQNS++RI QEYESLK DYVQM
Sbjct: 323 NHSLRQIVDSLHLKMVERSEEYEILKNYPDSLHYQLIAFQNSSKRITQEYESLKTDYVQM 382

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E +DQTI+FLRM S RAN    W
Sbjct: 383 KVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFAEW 420

[Close]

BLAST of MELO3C035344 vs. ExPASy TrEMBL
Match: A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.5e-49
Identity = 109/158 (68.99%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANR LKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 132 MNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 191

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSLHQ+++S+H+KMAERSEEYEILKNYVDSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 192 NHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 251

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 252 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289

[Close]

BLAST of MELO3C035344 vs. ExPASy TrEMBL
Match: A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.5e-48
Identity = 108/158 (68.35%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 180 MNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQ 239

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+++++H+KMAERSEEYEILKNYVDSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 240 NHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQM 299

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 300 KVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337

[Close]

BLAST of MELO3C035344 vs. ExPASy TrEMBL
Match: A0A5D3DUG2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 108/158 (68.35%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLELVNDLN+SI + E QI+DLEA 
Sbjct: 139 MNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDLEAQ 198

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+I+++H+KMAERSEEYEILKNY DSLH QLTA QNS++RI QEYESL  DYVQM
Sbjct: 199 NHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDYVQM 258

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 259 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296

[Close]

BLAST of MELO3C035344 vs. ExPASy TrEMBL
Match: A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.0e-46
Identity = 106/158 (67.09%), Postives = 119/158 (75.32%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LE+GKEYFLE VNDLN+SI + E QI+DLEA 
Sbjct: 155 MNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQ 214

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q+++S+H+KMAE SEEYEILKNYV+SLH QLTA QNS+ RI QEYESL  DYVQM
Sbjct: 215 NHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQM 274

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E VDQTIEFLRM S RANG   W
Sbjct: 275 KVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312

[Close]

BLAST of MELO3C035344 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 1   MNKANRSLKN------------------LESGKEYFLELVNDLNSSIRRWEAQILDLEAH 60
           MNKANRSLKN                  LESGKEYFLE VNDL++SI   E QI+DLEAH
Sbjct: 263 MNKANRSLKNEKTTLKATVGSEDEYIKDLESGKEYFLEFVNDLHTSIGIRETQIMDLEAH 322

Query: 61  NHSLHQSINSIHVKMAERSEEYEILKNYVDSLHSQLTAFQNSNERIVQEYESLKMDYVQM 120
           NHSL Q ++S+H+KM ERSEEYEILKNY DSLH QL AFQNS++RI QEYESLK DYVQM
Sbjct: 323 NHSLRQIVDSLHLKMVERSEEYEILKNYPDSLHYQLIAFQNSSKRITQEYESLKTDYVQM 382

Query: 121 KVYYDIQMRDFQVLMEHVDQTIEFLRMTSIRANGLQNW 141
           KV YD+Q RDFQVL+E +DQTI+FLRM S RAN    W
Sbjct: 383 KVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFAEW 420

The following BLAST results are available for this feature:

BLAST of MELO3C035344 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23632.1	1.7e-48	68.99	girdin-like [Cucumis melo var. makuwa]	[more]
TYK18656.1	1.1e-47	68.35	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0037780.1	3.3e-47	68.35	girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var...	[more]
KAA0062685.1	6.2e-46	67.09	girdin-like [Cucumis melo var. makuwa]	[more]
TYK23955.1	3.1e-45	66.46	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035344 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C035344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJ95	8.5e-49	68.99	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P...	[more]
A0A5D3D533	5.5e-48	68.35	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE...	[more]
A0A5D3DUG2	1.6e-47	68.35	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 P...	[more]
A0A5A7V9X6	3.0e-46	67.09	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P...	[more]
A0A5D3DK34	1.5e-45	66.46	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]

BLAST of MELO3C035344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035344.1	MELO3C035344.1	mRNA