MELO3C035199.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035199.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 31074440 .. 31074842 (+)
RNA-Seq ExpressionMELO3C035199.jh1
SyntenyMELO3C035199.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTCGCATGCATGGACGACCAACCGACCCAACTGCCATGGCCGGCGTTTCCGGTGGGGTTTCTCCATTGGCATCTCCTTCTAGGAGATACAGTCACTGATTCTTACTAGCCATGGCACTATCCTAACTGAGCTTTTTATACATCTTTTCTTCCTTATTTCCGTTTCTATTTCTCTTTTTTTTTTTTTTTTTAAAGCTTTTGAAATGGAGTCTTCTTGACCTTGTAAGACCTTTTCTTGACCTTGTAAGACCCAACACCATAACCTTTTCCTTTACCATCCATTTGATTTCATACTCTATTTTGGGTTATACCCATATAGAGTTTGAATACAATCTATCCCTATTTCCACCCAACTCATCTTCTCCTTCCTTGTCTATCCCTCTTGAGCTGCATTTTTATTAA

mRNA sequence

GTCTCGCATGCATGGACGACCAACCGACCCAACTGCCATGGCCGGCGTTTCCGGTGGGCTTTTGAAATGGAGTCTTCTTGACCTTGTAAGACCTTTTCTTGACCTTGTAAGACCCAACACCATAACCTTTTCCTTTACCATCCATTTGATTTCATACTCTATTTTGGGTTATACCCATATAGAGTTTGAATACAATCTATCCCTATTTCCACCCAACTCATCTTCTCCTTCCTTGTCTATCCCTCTTGAGCTGCATTTTTATTAA

Coding sequence (CDS)

ATGCATGGACGACCAACCGACCCAACTGCCATGGCCGGCGTTTCCGGTGGGCTTTTGAAATGGAGTCTTCTTGACCTTGTAAGACCTTTTCTTGACCTTGTAAGACCCAACACCATAACCTTTTCCTTTACCATCCATTTGATTTCATACTCTATTTTGGGTTATACCCATATAGAGTTTGAATACAATCTATCCCTATTTCCACCCAACTCATCTTCTCCTTCCTTGTCTATCCCTCTTGAGCTGCATTTTTATTAA

Protein sequence

MHGRPTDPTAMAGVSGGLLKWSLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPLELHFY
Homology
BLAST of MELO3C035199.jh1 vs. NCBI nr
Match: KAG2395431.1 (Gibberellin 2-beta-dioxygenase [Vigna angularis])

HSP 1 Score: 75.5 bits (184), Expect = 1.22e-13
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0

Query: 21  WSLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPL 80
           W+LLDLVRPFLDLVRP+T++  F    +   I   T IEF+  LSL PPNSSSPSLSIP 
Sbjct: 60  WTLLDLVRPFLDLVRPHTLSVFFVFAFVEDPISESTDIEFDLLLSLLPPNSSSPSLSIPP 119

Query: 81  ELH 83
           EL+
Sbjct: 120 ELY 122

BLAST of MELO3C035199.jh1 vs. NCBI nr
Match: RXH80106.1 (hypothetical protein DVH24_041253 [Malus domestica])

HSP 1 Score: 52.4 bits (124), Expect = 7.45e-06
Identity = 31/59 (52.54%), Postives = 35/59 (59.32%), Query Frame = 0

Query: 24  LDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPLEL 82
           LDLVRPFLDLVR +  +  F +H         T I+     S  PPNSSSPSLSIP EL
Sbjct: 69  LDLVRPFLDLVRCHARSVVFVLHFAPSFASELTDIQLGLCSSSLPPNSSSPSLSIPPEL 127

BLAST of MELO3C035199.jh1 vs. NCBI nr
Match: KAF8017749.1 (hypothetical protein BT93_H2830 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 49.7 bits (117), Expect = 3.33e-05
Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 22  SLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPLE 81
           +LLDLVRPFLDLVRP ++     +     S    + +E+    S FPPNS  PSLSIP E
Sbjct: 46  ALLDLVRPFLDLVRPPSVPAPSLLPPAPGSKSQASDVEYRCLPSPFPPNSPPPSLSIPPE 105

BLAST of MELO3C035199.jh1 vs. NCBI nr
Match: PIA28059.1 (hypothetical protein AQUCO_07300023v1 [Aquilegia coerulea])

HSP 1 Score: 47.0 bits (110), Expect = 3.87e-04
Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 18  LLKWSLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLS 77
           L  +SLLDLVRPFLDLVRP+ +        I+ ++  +         S FP NSSS  LS
Sbjct: 33  LCSYSLLDLVRPFLDLVRPHVVFVILHPSSITDNLSRFIDRRSTLYHSSFPSNSSSLFLS 92

Query: 78  IPLELHFY 85
           IP EL  Y
Sbjct: 93  IPPELLQY 100

BLAST of MELO3C035199.jh1 vs. ExPASy TrEMBL
Match: A0A2P2J7N9 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.51e-07
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 22  SLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPLE 81
           +LLDLVRPFLDLVRP ++     + +    I     I+ EY L LFP NSSS SLSIP E
Sbjct: 44  ALLDLVRPFLDLVRPRSVFLPSILCVFRNFISESWDIKLEYFLVLFPLNSSSSSLSIPPE 103

BLAST of MELO3C035199.jh1 vs. ExPASy TrEMBL
Match: A0A498I9I8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041253 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.61e-06
Identity = 31/59 (52.54%), Postives = 35/59 (59.32%), Query Frame = 0

Query: 24  LDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLSIPLEL 82
           LDLVRPFLDLVR +  +  F +H         T I+     S  PPNSSSPSLSIP EL
Sbjct: 69  LDLVRPFLDLVRCHARSVVFVLHFAPSFASELTDIQLGLCSSSLPPNSSSPSLSIPPEL 127

BLAST of MELO3C035199.jh1 vs. ExPASy TrEMBL
Match: A0A2G5C9V1 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_07300023v1 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.87e-04
Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 0

Query: 18  LLKWSLLDLVRPFLDLVRPNTITFSFTIHLISYSILGYTHIEFEYNLSLFPPNSSSPSLS 77
           L  +SLLDLVRPFLDLVRP+ +        I+ ++  +         S FP NSSS  LS
Sbjct: 33  LCSYSLLDLVRPFLDLVRPHVVFVILHPSSITDNLSRFIDRRSTLYHSSFPSNSSSLFLS 92

Query: 78  IPLELHFY 85
           IP EL  Y
Sbjct: 93  IPPELLQY 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG2395431.11.22e-1361.90Gibberellin 2-beta-dioxygenase [Vigna angularis][more]
RXH80106.17.45e-0652.54hypothetical protein DVH24_041253 [Malus domestica][more]
KAF8017749.13.33e-0549.18hypothetical protein BT93_H2830 [Corymbia citriodora subsp. variegata][more]
PIA28059.13.87e-0445.59hypothetical protein AQUCO_07300023v1 [Aquilegia coerulea][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P2J7N91.51e-0754.10Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A498I9I83.61e-0652.54Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_041253 PE=4 SV=1[more]
A0A2G5C9V11.87e-0445.59Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_07300023v1 PE=4... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035199.jh1.t1MELO3C035199.jh1.t1mRNA