MELO3C035163 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035163
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	glutamic acid-rich protein
Location	chr11: 25610079 .. 25610705 (-)
RNA-Seq Expression	MELO3C035163
Synteny	MELO3C035163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACATTGAAGATGACGAACGTGAATCTGGAGTCAGGCTCAAACATGGTAAATTGCAAAATACTGATAATAATTGCGATGCTGAAGCTTCTGGGGAGTTTGTTGAGATTTGAGAACAATGTAGCAAAGGGAAAAAGTAGAAAGAAGCTTGAGGACAAGAAGAGTTTGGGTGATGTGAAGGAGTAAAGAGTGAAGATCAGAGAAGAGGAGACATTAAAGAGGAAAAAAGCACAAATAATGATTATGATAATGGAACAGATCTTGTGGATCTATCGACCAAGAAGAAAAATAATAAGAAGAAAAGGGAAGAAGATGATGATTTTCAAAAGAACAATGGAGAAGCTATGGTGAACGAGGAAGTGCCGGTTTTGGATAGCAAAGAGTTGAAAAGAAAAGAGAAGAAAAAGAGTAAGAATAGAGAGTTAGGAAAAGAAGGGCATGTTGATGGGTCAGAGAAGCAACATAGTACAAAGAGAAGAAAAGTATGAACTTTAAACAATTTTGGTGGATGATCATTTATCAGAAGATGGAGTCTTTGTATTGGAAGATTCCATTAATTGGCTCACAGTTTCATGGAAAGTCTGTCATATCCAAAGCTTCTGTTTACAAATTGCTACGAATGGT

mRNA sequence

ATGGTGACATTGAAGATGACGAACGTGAATCTGGAGTCAGGCTCAAACATGAGTGAAGATCAGAGAAGAGGAGACATTAAAGAGGAAAAAAGCACAAATAATGATTATGATAATGGAACAGATCTTGTGGATCTATCGACCAAGAAGAAAAATAATAAGAAGAAAAGGGAAGAAGATGATGATTTTCAAAAGAACAATGGAGAAGCTATGGTGAACGAGGAAGTGCCGGTTTTGGATAGCAAAGAGTTGAAAAGAAAAGAGAAGAAAAAGAGTAAGAATAGAGAGTTAGGAAAAGAAGGGCATGTTGATGGGTCAGAGAAGCAACATAGTACAAAGAGAAGAAAAAAGATGGAGTCTTTGTATTGGAAGATTCCATTAATTGGCTCACAGTTTCATGGAAAGTCTGTCATATCCAAAGCTTCTGTTTACAAATTGCTACGAATGGT

Coding sequence (CDS)

ATGGTGACATTGAAGATGACGAACGTGAATCTGGAGTCAGGCTCAAACATGAGTGAAGATCAGAGAAGAGGAGACATTAAAGAGGAAAAAAGCACAAATAATGATTATGATAATGGAACAGATCTTGTGGATCTATCGACCAAGAAGAAAAATAATAAGAAGAAAAGGGAAGAAGATGATGATTTTCAAAAGAACAATGGAGAAGCTATGGTGAACGAGGAAGTGCCGGTTTTGGATAGCAAAGAGTTGAAAAGAAAAGAGAAGAAAAAGAGTAAGAATAGAGAGTTAGGAAAAGAAGGGCATGTTGATGGGTCAGAGAAGCAACATAGTACAAAGAGAAGAAAAAAGATGGAGTCTTTGTATTGGAAGATTCCATTAATTGGCTCACAGTTTCATGGAAAGTCTGTCATATCCAAAGCTTCTGTTTACAAATTGCTACGAATG

Protein sequence

MVTLKMTNVNLESGSNMSEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRKKMESLYWKIPLIGSQFHGKSVISKASVYKLLRM

Homology

[Close]

BLAST of MELO3C035163 vs. NCBI nr
Match: XP_008463862.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo] >TYK14356.1 glutamic acid-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-33
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGDIKEE+ST+ND  NGTDLVDLSTKKK  +K+REEDDDFQKN+GEAMV EEVPV
Sbjct: 254 SEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQREEDDDFQKNSGEAMVKEEVPV 313

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EGH DGSE+QHS KRRK
Sbjct: 314 LDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRK 351

[Close]

BLAST of MELO3C035163 vs. NCBI nr
Match: KAA0035280.1 (glutamic acid-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 4.0e-32
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGDIKEE+ST+ND  NGTDLVDLSTKKK  +K+REEDDDFQKN+G AMV EEVPV
Sbjct: 254 SEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQREEDDDFQKNSGGAMVKEEVPV 313

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EGH DGSE+QHS KRRK
Sbjct: 314 LDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRK 351

[Close]

BLAST of MELO3C035163 vs. NCBI nr
Match: XP_004148227.1 (uncharacterized protein DDB_G0283697 [Cucumis sativus] >KGN47333.1 hypothetical protein Csa_022954 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 5.8e-31
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGD+KE KSTNND DNGTD VDLS KKK  K++REEDDDFQKN+GEAMV EEVPV
Sbjct: 257 SEDQRRGDVKEGKSTNNDNDNGTDHVDLSPKKK-KKRRREEDDDFQKNSGEAMVKEEVPV 316

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EG  DGSE+QHSTKRRK
Sbjct: 317 LDSKELKRKEKKKSKNRELGEEGRDDGSEEQHSTKRRK 353

[Close]

BLAST of MELO3C035163 vs. NCBI nr
Match: TYK14358.1 (glutamic acid-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-28
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 15  SNMSEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE 74
           +N+++ + R  ++++KS         DLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE
Sbjct: 378 NNVAKGKSRKKLEDKKS--------LDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE 437

Query: 75  VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK
Sbjct: 438 VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 470

[Close]

BLAST of MELO3C035163 vs. NCBI nr
Match: XP_038902882.1 (probable xyloglucan galactosyltransferase GT11 [Benincasa hispida])

HSP 1 Score: 107.8 bits (268), Expect = 7.9e-20
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLST--KKKNNKKKREED-DDFQKNNGEAMVNEE 77
           +E QRR DI+EEK  N D D+GTD+VDLST  KKK  KKKREED DDFQ N+G AMVN+E
Sbjct: 256 TEVQRRRDIEEEKGINKDNDDGTDIVDLSTKKKKKKKKKKREEDVDDFQNNSGGAMVNDE 315

Query: 78  VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           +PV +SKELKRK++KK KNRELG+EG  D SE++  TKRRK
Sbjct: 316 MPVSNSKELKRKDRKKRKNRELGEEGGDDVSEEKQGTKRRK 356

[Close]

BLAST of MELO3C035163 vs. ExPASy TrEMBL
Match: A0A5D3CVE3 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00960 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.0e-33
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGDIKEE+ST+ND  NGTDLVDLSTKKK  +K+REEDDDFQKN+GEAMV EEVPV
Sbjct: 254 SEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQREEDDDFQKNSGEAMVKEEVPV 313

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EGH DGSE+QHS KRRK
Sbjct: 314 LDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRK 351

[Close]

BLAST of MELO3C035163 vs. ExPASy TrEMBL
Match: A0A1S3CK97 (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103501895 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.0e-33
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGDIKEE+ST+ND  NGTDLVDLSTKKK  +K+REEDDDFQKN+GEAMV EEVPV
Sbjct: 254 SEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQREEDDDFQKNSGEAMVKEEVPV 313

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EGH DGSE+QHS KRRK
Sbjct: 314 LDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRK 351

[Close]

BLAST of MELO3C035163 vs. ExPASy TrEMBL
Match: A0A5A7SW64 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00720 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGDIKEE+ST+ND  NGTDLVDLSTKKK  +K+REEDDDFQKN+G AMV EEVPV
Sbjct: 254 SEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQREEDDDFQKNSGGAMVKEEVPV 313

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EGH DGSE+QHS KRRK
Sbjct: 314 LDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRK 351

[Close]

BLAST of MELO3C035163 vs. ExPASy TrEMBL
Match: A0A0A0KCS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.8e-31
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 18  SEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEEVPV 77
           SEDQRRGD+KE KSTNND DNGTD VDLS KKK  K++REEDDDFQKN+GEAMV EEVPV
Sbjct: 257 SEDQRRGDVKEGKSTNNDNDNGTDHVDLSPKKK-KKRRREEDDDFQKNSGEAMVKEEVPV 316

Query: 78  LDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           LDSKELKRKEKKKSKNRELG+EG  DGSE+QHSTKRRK
Sbjct: 317 LDSKELKRKEKKKSKNRELGEEGRDDGSEEQHSTKRRK 353

[Close]

BLAST of MELO3C035163 vs. ExPASy TrEMBL
Match: A0A5D3CT23 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00980 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.9e-29
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 15  SNMSEDQRRGDIKEEKSTNNDYDNGTDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE 74
           +N+++ + R  ++++KS         DLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE
Sbjct: 378 NNVAKGKSRKKLEDKKS--------LDLVDLSTKKKNNKKKREEDDDFQKNNGEAMVNEE 437

Query: 75  VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 116
           VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK
Sbjct: 438 VPVLDSKELKRKEKKKSKNRELGKEGHVDGSEKQHSTKRRK 470

The following BLAST results are available for this feature:

BLAST of MELO3C035163 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463862.1	6.2e-33	85.71	PREDICTED: glutamic acid-rich protein [Cucumis melo] >TYK14356.1 glutamic acid-r...	[more]
KAA0035280.1	4.0e-32	84.69	glutamic acid-rich protein [Cucumis melo var. makuwa]	[more]
XP_004148227.1	5.8e-31	84.69	uncharacterized protein DDB_G0283697 [Cucumis sativus] >KGN47333.1 hypothetical ...	[more]
TYK14358.1	1.2e-28	78.22	glutamic acid-rich protein [Cucumis melo var. makuwa]	[more]
XP_038902882.1	7.9e-20	67.33	probable xyloglucan galactosyltransferase GT11 [Benincasa hispida]	[more]

BLAST of MELO3C035163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVE3	3.0e-33	85.71	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CK97	3.0e-33	85.71	glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103501895 PE=4 SV=1	[more]
A0A5A7SW64	2.0e-32	84.69	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KCS1	2.8e-31	84.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1	[more]
A0A5D3CT23	5.9e-29	78.22	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of MELO3C035163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035163.1	MELO3C035163.1	mRNA