MELO3C035157 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035157
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr01: 17145134 .. 17145615 (+)
RNA-Seq Expression	MELO3C035157
Synteny	MELO3C035157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATATATTTTGATTCTAGCTATATGTTCGTATTTGGTTATTGAATGTTTGTTTTCTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTTAACTTACAAATATTTCATGTAGGGGTTTCTAACTTTATATGTTATTGTCTATTTATTGAGCAGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGG

mRNA sequence

TTATATATTTTGATTCTAGCTATATGTTCGTATTTGGTTATTGAATGTTTGTTTTCTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGG

Coding sequence (CDS)

ATGTTTGTTTTCTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGG

Protein sequence

MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW

Homology

[Close]

BLAST of MELO3C035157 vs. NCBI nr
Match: KAA0046834.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 6   MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRL 65
           M  VIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRL
Sbjct: 250 MDKVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQTTPTPRRRAQSRL 309

Query: 66  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 310 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 360

[Close]

BLAST of MELO3C035157 vs. NCBI nr
Match: TYJ99698.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 210.3 bits (534), Expect = 8.9e-51
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 7   SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRL 66
           ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRL
Sbjct: 90  TLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRL 149

Query: 67  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 150 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 200

[Close]

BLAST of MELO3C035157 vs. NCBI nr
Match: KAA0045433.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 104/117 (88.89%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRK 60
           ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPR+
Sbjct: 101 VYFLYVHIVIMSYRRSNFMETDDMFLQFEEDLNNIVGGSSSVGDNTAGSSSQQTTPTPRR 160

Query: 61  RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           RAQSRLLELERH+AINGRIPMTIAPGAEKPISPH +RFSQAIGVCVRKTFPVRCLKW
Sbjct: 161 RAQSRLLELERHIAINGRIPMTIAPGAEKPISPHVIRFSQAIGVCVRKTFPVRCLKW 217

[Close]

BLAST of MELO3C035157 vs. NCBI nr
Match: TYJ96549.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 9.8e-50
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 7   SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRL 66
           ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRL
Sbjct: 192 TLAIMSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRL 251

Query: 67  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHA RFSQAIGVCVRKTFPVRCLKW
Sbjct: 252 LELERHVAINGRIPMTIAPGAEKPISPHANRFSQAIGVCVRKTFPVRCLKW 302

[Close]

BLAST of MELO3C035157 vs. NCBI nr
Match: TYK11476.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 10  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLEL 69
           IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLEL
Sbjct: 144 IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLEL 203

Query: 70  ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 204 ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 251

[Close]

BLAST of MELO3C035157 vs. ExPASy TrEMBL
Match: A0A5A7TUT1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001310 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.6e-52
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 6   MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRL 65
           M  VIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRL
Sbjct: 250 MDKVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQTTPTPRRRAQSRL 309

Query: 66  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 310 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 360

[Close]

BLAST of MELO3C035157 vs. ExPASy TrEMBL
Match: A0A5D3BNG3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00960 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.3e-51
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 7   SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRL 66
           ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRL
Sbjct: 90  TLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRL 149

Query: 67  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 150 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 200

[Close]

BLAST of MELO3C035157 vs. ExPASy TrEMBL
Match: A0A5A7TPH1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00310 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 104/117 (88.89%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRK 60
           ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPR+
Sbjct: 101 VYFLYVHIVIMSYRRSNFMETDDMFLQFEEDLNNIVGGSSSVGDNTAGSSSQQTTPTPRR 160

Query: 61  RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           RAQSRLLELERH+AINGRIPMTIAPGAEKPISPH +RFSQAIGVCVRKTFPVRCLKW
Sbjct: 161 RAQSRLLELERHIAINGRIPMTIAPGAEKPISPHVIRFSQAIGVCVRKTFPVRCLKW 217

[Close]

BLAST of MELO3C035157 vs. ExPASy TrEMBL
Match: A0A5D3BBZ9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002070 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.7e-50
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 7   SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRL 66
           ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRL
Sbjct: 192 TLAIMSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRL 251

Query: 67  LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           LELERHVAINGRIPMTIAPGAEKPISPHA RFSQAIGVCVRKTFPVRCLKW
Sbjct: 252 LELERHVAINGRIPMTIAPGAEKPISPHANRFSQAIGVCVRKTFPVRCLKW 302

[Close]

BLAST of MELO3C035157 vs. ExPASy TrEMBL
Match: A0A5D3CM32 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001360 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.1e-50
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 10  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLEL 69
           IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLEL
Sbjct: 144 IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLEL 203

Query: 70  ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 117
           ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW
Sbjct: 204 ERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKW 251

The following BLAST results are available for this feature:

BLAST of MELO3C035157 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046834.1	1.4e-51	96.40	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ99698.1	8.9e-51	95.50	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0045433.1	2.6e-50	88.89	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ96549.1	9.8e-50	93.69	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK11476.1	1.7e-49	96.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035157 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C035157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUT1	6.6e-52	96.40	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BNG3	4.3e-51	95.50	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TPH1	1.2e-50	88.89	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BBZ9	4.7e-50	93.69	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CM32	8.1e-50	96.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C035157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035157.1	MELO3C035157.1	mRNA