MELO3C035094 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035094
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	chr11: 20196678 .. 20198230 (+)
RNA-Seq Expression	MELO3C035094
Synteny	MELO3C035094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATGCAATCGATTTCATCCAATCCAACACCCAGATTATTGGCCTGAGTTATCATTCACTCAAGTTCGCCCAAATGCGGACTTACTTAAAGGACCCGGTCGACCAAGAACAACGATGATCCATAATGAAATGGATTGGAAAGAGTCTGGTCAATCACTCAGATGCACTATCTGTACAGTCGAAGGACACAACAGACGTACTTGTCCTCAACGTGCATCTTCTTCTTCTTCAAGACACTAATTTTAGGATGTATTATAGGATTTTATGATGTAATTGTTTGATAACTTCTATGTAATTTCAGAAAGCTTTAATGAACTACTTCTGTATTTTTATATATACGTTTGAGTATACTTTGATAATAAATATAAATTAGGGTTTAATGTATACTTTTGTTGTAGTGCAATTATATAATTATATAATGGTCTTGTTTTTCTTCTTCATGTAATTAATGAAATATTTTTTATATTATTTGCAGAATGATCCTGGTCCAGTTGATGATAGCCATCTATATCTACAGGCGACATATAGATCACAGAGCATATGAGATACCCCCTCCACCGTCGTGTTGATTTGTCGGAGGAGAGAGGCAGCGTCTTAGCGCACCATCCCCTTCGACCAGCGTATTGCTCCATATTTAGAGGCTGCTGGATTCATCGGGGTTTCCCAGGTTGGGTTCATGTAGTTAGATTGACATTTAATTACTGCACTGGTCGAGCGTTGGAGACCAGAGACCTACACATTTCACATGCCATGTGGGGAGTGCACGATCACCCTACAGGATGTTGCAGTGTAGTTGGGGTTGCTAGTGGATGGGGACCCTCTAACAGGATCATTAAGGTATAATTGGATGCTTATCTGCAATAATTACTTGGGAGTTGTACCGCCTGACATGAAAGGTCAGCGACGGAGTCTTCCATGGTTGCCATAACAGTTTGAAGAATTGCTACCAGATGCTGACATTGTGAGCGTTCAGTTAATTGGGGGGCTTTCTTTTTGCTGACAAGTCAAACACCCTGGTCTACTGTATGTTTCTTCAATTCTTATTCGATTTCGACCAGGCTGGTACGTATGCGTGAGGCGCTGTGACCCTTGCATGGTTATATAGGGAACTCTGTCGAGCGAGTAATGCACAGTCCTTAGAGATCGTTGACCCATTAATGTTGCTACAAGTATGACCATACGACAGATTCTCCATTGTAGCTCCACAGAACGCTGCAGCATTCAGATGGTCAACCTTTGAGTTTCAGGTACTATTTAATATACATGTTTTTTAATAGAGTATCTATAATTTATTAATGGTTTATTTCACAAATTAGATGGAGCGGTGTTCAAGCTGCATCTGAACAGTCAGGGAATATGTTGCTCATATATCGATGGACATTTGATCGGCTGAGTCGGTTTCAGGTAGTAAAATATAATACAAAAGTTCTATAATTTTATTTTTTGTTGACTACTGTCGTTTGTTTTTTCAATAGATTAATTGGACACCATACACGCTCGACATTATGGCATCGCTTTTTGTTAGATGTCATAGTAGTCAAGTGGTTTGA

mRNA sequence

ATGTTATGCAATCGATTTCATCCAATCCAACACCCAGATTATTGGCCTGAGTTATCATTCACTCAAGTTCGCCCAAATGCGGACTTACTTAAAGGACCCGGTCGACCAAGAACAACGATGATCCATAATGAAATGGATTGGAAAGAGTCTGGTCAATCACTCAGATGCACTATCTGTACAGTCGAAGGACACAACAGACGTACTTGTCCTCAACGTGCATCTTCTTCTTCTTCAAGACACTAATTTTAGGATGTATTATAGGATTTTATGATAATGATCCTGGTCCACTCCACAGAACGCTGCAGCATTCAGATGGTCAACCTTTGAGTTTCAGATGGAGCGGTGTTCAAGCTGCATCTGAACAGTCAGGGAATATGTTGCTCATATATCGATGGACATTTGATCGGCTGAGTCGGTTTCAGATTAATTGGACACCATACACGCTCGACATTATGGCATCGCTTTTTGTTAGATGTCATAGTAGTCAAGTGGTTTGA

Coding sequence (CDS)

ATGCACTATCTGTACAGTCGAAGGACACAACAGACGTACTTGTCCTCAACGTGCATCTTCTTCTTCTTCAAGACACTAATTTTAGGATGTATTATAGGATTTTATGATAATGATCCTGGTCCACTCCACAGAACGCTGCAGCATTCAGATGGTCAACCTTTGAGTTTCAGATGGAGCGGTGTTCAAGCTGCATCTGAACAGTCAGGGAATATGTTGCTCATATATCGATGGACATTTGATCGGCTGAGTCGGTTTCAGATTAATTGGACACCATACACGCTCGACATTATGGCATCGCTTTTTGTTAGATGTCATAGTAGTCAAGTGGTTTGA

Protein sequence

MHYLYSRRTQQTYLSSTCIFFFFKTLILGCIIGFYDNDPGPLHRTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVRCHSSQVV

Homology

[Close]

BLAST of MELO3C035094 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 336 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 395

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 396 CQSGQAV 402

[Close]

BLAST of MELO3C035094 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 689 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 748

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 749 CQSGQAV 755

[Close]

BLAST of MELO3C035094 vs. NCBI nr
Match: TYK25184.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 302 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 361

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 362 CQSGQAV 368

[Close]

BLAST of MELO3C035094 vs. NCBI nr
Match: KAA0044309.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK02544.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 254 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 313

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 314 CQSGQAV 320

[Close]

BLAST of MELO3C035094 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 6.1e-25
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           +TLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 297 KTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 356

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 357 CQSGQAV 363

[Close]

BLAST of MELO3C035094 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 254 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 313

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 314 CQSGQAV 320

[Close]

BLAST of MELO3C035094 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 336 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 395

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 396 CQSGQAV 402

[Close]

BLAST of MELO3C035094 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 689 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 748

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 749 CQSGQAV 755

[Close]

BLAST of MELO3C035094 vs. ExPASy TrEMBL
Match: A0A5D3DNL9 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003100 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 302 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 361

Query: 104 CHSSQVV 111
           C S Q V
Sbjct: 362 CQSGQAV 368

[Close]

BLAST of MELO3C035094 vs. ExPASy TrEMBL
Match: A0A5A7TZP5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00040 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 44  RTLQHSDGQPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRFQINWTPYTLDIMASLFVR 103
           RTLQHSDG+PLSFRWSGVQAASEQSGNMLLIYRWTFDRLSR QINWTPYT DIMASL VR
Sbjct: 110 RTLQHSDGRPLSFRWSGVQAASEQSGNMLLIYRWTFDRLSRSQINWTPYTPDIMASLPVR 169

Query: 104 CHSSQ 109
           C S Q
Sbjct: 170 CQSGQ 174

The following BLAST results are available for this feature:

BLAST of MELO3C035094 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035094 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03303.1	2.7e-25	89.55	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0042980.1	2.7e-25	89.55	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
TYK25184.1	2.7e-25	89.55	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0044309.1	2.7e-25	89.55	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]
KAA0051993.1	6.1e-25	88.06	serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi...	[more]

BLAST of MELO3C035094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSW1	1.3e-25	89.55	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BUF5	1.3e-25	89.55	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TI34	1.3e-25	89.55	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3DNL9	1.3e-25	89.55	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TZP5	2.9e-25	90.77	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

BLAST of MELO3C035094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035094.1	MELO3C035094.1	mRNA