MELO3C035086.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035086.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPyruvate kinase
Locationchr11: 20488687 .. 20492606 (+)
RNA-Seq ExpressionMELO3C035086.jh1
SyntenyMELO3C035086.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGTGAGTTACGAATCCCTATGAAAAAAGCCTATCCTTTGCCTTAGTAAAACTCGTACAATTCTATCTTATAATTTCTAGCTAGTTTCAATGTTTTGACCGAGGGCCGAGTTTAAGGAGGGATCCTTCTCGCTTCAGAGTAGAGGGAAAGCAAGCCTAGGGCATTTTTTAATTCTTTCGAAGCATGTCTAGTGAGTCGAAATAGCAAAACCTAGAAGTTTTATCTAAACATGATTTCAATAAATGAACTTTATTAAAAATCAACCTCAAATTGACTACTTGCTTCTCTTGAATATTTAATTGATAATAAAAAATTACTTTGTTGCATTGTTAAGGTATGAGTAACATCCTTTGCATATTTGTTTGAAAACATCATCAAAATTTTTGCATGATTGTTTGAGTTTAATTCTTTTAAAATAATGTGTGAATCCCTTGCATGATGAATGACTGAATGTTAGCACATTTTTAATTTTGTTGCTCGGGACGAACAAGTCTTAAGTTGGGGGTAATTTGTTAGGGCTATTTTAGACCTAAATTATTAGACTAATTTTTTCCAACCTTTAGCCATTTACTTACTAAAATGTCATTTTTATGCAGAATATGAAACTTCACCCCGAGTTGTCTAGCCACATGAAACTAGAAGTCTTATGTAAAGGTTTGGCATTCAATAAAGCTTGTTGTCACTTTGAAAGGAATGATCACATTAGAATTAAGTGAACCCTACACAAGGATTGCCAACCGATTAGGTCAAGTAGAATGCGTTGAATTCCTTCAGTACCAGAACTTATGTAAGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTGCCCAGTTCCTTAGACCTCATGTAAACCTGATATTTTCTTGGTTTAATTTCTTTAAATGTGAGAAAAAAAGAAAAGAAAATGGAAATTAAGTGTGTGTGTGTATATATATATATATTTAATGGTTTTATAAAGTAAAATAAAGAAAAAAGAAAAGAAAGGATAAAAGGAAAAAAAAGAGAAGAAAAAATTTCATTTTTCTTTTCTTCTTCTTCTCTTCCCTTCACCGCCAAGCTTTTTCTTCAAAATTTCTCATCCATCTTCGATTTTTCCTTCTTCAAATTACAAAGAAAATTTAAGAGAGAGTTTAGAAGGAAGAAGAAGAGGAATTTTACTAGAGTTTTGAGGTTGAAGAAGAGAAGGAGAACTCAGGCAAAGTGTATCCATGGCAGAATATTGGTTCATTCTGCACATCCCTGGTTTATAATTCGGTTTGAACTCTTCAAAAGGAATTAAGAGGTGAAGTTTACATTTACTGAAAGCTACTTCATTTTCAAGTAAATTTTAAGAAGAAAGTTTGAGCAAATTCGGATGTTCACTAGGTGATTTTTGATGAAGAAAACAGGGTAGCTGGTTTTCACACGAATTCAGGAGGTCTCTGGTTTTTCTTGTATTGCTGAGAGTACCGGTGGAGTTAGGATATTTATTTAATATGGTTTGAAATCTTATTCAATTTACTACAACTTTTATGAAGAAATTATGAGCTAAATATGATTGGAAGTAAGCTTAATTTCAGAAACAAATCAGAGGATAGCAGAAGACTCTATTTTTGAACTCTCTCTATTTTGGACCATTTCTGTAGCAATCTGTTGGGAATCGTATTTTCTTTCCTTCAGTTAAATTATAGAAGACATCAAAATAAAGATTTTGACATAAAGAAAACTTATTTTGGTTAAGTATCGAAGGAGCTATAATCATTTGAAGTTTATGTTAGAAATCTAGAAATTTCAGAGAGTTGTTGAAATAGGATTTTATTTCTTAAGCTTTGTTTTCGTGAGTGTCATCTTTAGTGCGACATGTTATGTATATCTTTAGAAAATCAGAATATTTAGAGTTCTAATACTCGGTTTGGTTGTTGGTAGGCCGAGAAGAATTAAACTGAGCTTACAGACCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAATTTTGAAATATTTTCCATAATTGTTATTTATGGTTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATTTGAATTTCATGACTATTTTCAAGTATATGTTTGGAGACTAGATTTCTTAATGAAATTTATGCTAGCACGTGGATATTAAATGTTTGGAAAGTATTTAAACCACAATGTTTTAAGCAAAGCATGAATTAGTAAGAAGTTTTGTTTTAAGAACTACAGTTTTCCACGAAAGAGCTGAGTAAAGTTTGAGCTCTGTGTAAGATTTATAAGCAGACATATTTTAATACTTTTAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCATGTGCACATTGGTAAGATTCCGTTGTTGACGTTGAGTGAACTCCGTGACAATGATGCTGTTGTAAGTGCTGGGCGGACCCTACTACGAAAAAGACGATAGGAGTGCTGGACGGGTCCCACTACATTGTAGAGCTTGTAAACGTTGTTGTACTGAGTGTACTCTACACAACGTAGATTTGTCATGTTAGTTAAAATATTTCGATATACTTGGTATGCCTTGCTAGATTTCAATGACGTATATGCTGAATATTTGAGAAAGCTATTCTTACTACTATACGTTTACATTTACGACTTGTATAAACAAATTTATATGTGTAAAGTTTTCACGTGCTTTTATCTTTAAATTTATAGTTTTAAACTGAGTCACTCACTGAGCTTTATAGCTTACCTTTCCAAAATATTTTACACACTTTCTAGGTAGAGATCGAGTTCCTGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCGTTATCGATTGCTAGTATGTGTTTCAAGTTAGGCATAGAGTCTGTTATGTTATGATGTATATCCACCCTTGTATGTTATAAATACTCCACAGTTTGTATATGCTTTAGGAGTTGCAGTTGTGTAAATTTTTGTTGGTTATGTTTTGGTTAATGTGTCTCTAGGTTTACTTGTGAAATTAGTTATTTTCGAGATACATTTTATGATGTATATGATTAGTCTAGAATTCACTGCGTTGTGTACATGTATAATAGTTTATATACTAGACTGGCAAGTTCATCACATTAAAGTTTTAAGCAGAGTCGACAGATACAGGTAAAGAAAATCATTGTTGGTCGGCTTCACGCCGTCTTTCGATCTAAGCTAACAGGTAGTCCGGGAGGGGGTGTGATACCTTAGTTGGTTAGGTCAAGCAGAATGCATTGAGTTCCTTCAGTATCAGAGCTTGTGTAGAGAACTCTTCACTCTTGGCCTAACCAAAACCAGACCTACCCAGTTCCTTAGGCCTCAGTTGGTTAGGTCAAGCAGAATGCGTTGAGTTCTTTTAGTATCAGAGCTTGTGTAGGGAACTCTTCACTCTTGGCCTAACCAAAACCAGACTTGCCTAGTTCCTTATACCTTAGTCGGTTAGGTCAAGTAGAATGCGTTGAGTTTCCTCAGTATCAGAGCTTGTGCGGGGAACTCTTCATTCTTGGCTTAACCAAAACGAGACTTGCCCAGTTCCTTAGACCTCAGCTGGTTAGATCAAGTAGAATGTGTTGAGTTCCCTCAATATCAAAGCTTGTGTGGGGAACTCTTTACTCTTGGCCTAACCAAAACTAGACCTGCCCAGTTCCTTAGACCTCAGTCGGTTAGGTCAAGTAGAATGCATTGAGTTCTCTCAGTATCAGATCTTGTGAGATAAGTGAGTTTAAAAATCAAAATATGAGCTACCTTATATGTATGGTTAGAGCAGATATCCATCAAATAATGATTTGTGGAGTAGGTGGAAAATCAGACACTTTAATGATCAATGGCCACAAGTAAAAGATGTCAACCTAGCTAATGAGTTTAGGAGATATGAACCACAAAGTTCCAACTTTTACAATTCACCCAAATCTTAA

mRNA sequence

ATGTTAGTGAGTTACGAATCCCTATGAAAAAAGCCTATCCTTTGCCTTAGTAAAACTCGTACAATTCTATCTTATAATTTCTAGCTAGTTTCAATGTTTTGACCGAGGGCCGAGTTTGGCATTCAATAAAGCTTGTTGTCACTTTGAAAGGAATGATCACATTAGAATTAAGTGAACCCTACACAAGGATTGCCAACCGATTAGGTCAAGTAGAATGCGTTGAATTCCTTCAGTACCAGAACTTATGTAAGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTGCCCAGTTCCTTAGACCTCATAGAAAATTTAAGAGAGAGTTTAGAAGGAAGAAGAAGAGGAATTTTACTAGAGTTTTGAGGTTGAAGAAGAGAAGGAGAACTCAGGCAAAGTGTATCCATGGCAGAATATTGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCATGTGCACATTGAGATCGAGTTCCTGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCGTTATCGATTGCTAAGTCGACAGATACAGGTAAAGAAAATCATTGTTGGTCGGCTTCACGCCGTCTTTCGATCTAAGCTAACAGGTAGTCCGGGAGGGGGTGTGATACCTTAGTTGGTTAGGTCAAGCAGAATGCATTGAGTTCCTTCAGTATCAGAGCTTGTGTAGAGAACTCTTCACTCTTGGCCTAACCAAAACCAGACCTACCCAGTTCCTTAGGCCTCAGTTGAGCTTGTGCGGGGAACTCTTCATTCTTGGCTTAACCAAAACGAGACTTGCCCAGTTCCTTAGACCTCAGCTGGTTAGATCAAGTAGAATGTGTTGAGTTCCCTCAATATCAAAGCTTGTGTGGGGAACTCTTTACTCTTGGCCTAACCAAAACTAGACCTGCCCAGTTCCTTAGACCTCAGTCGGTTAGGTCAATAGGTGGAAAATCAGACACTTTAATGATCAATGGCCACAAGTAAAAGATGTCAACCTAGCTAATGAGTTTAGGAGATATGAACCACAAAGTTCCAACTTTTACAATTCACCCAAATCTTAA

Coding sequence (CDS)

ATGATCACATTAGAATTAAGTGAACCCTACACAAGGATTGCCAACCGATTAGGTCAAGTAGAATGCGTTGAATTCCTTCAGTACCAGAACTTATGTAAGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTGCCCAGTTCCTTAGACCTCATAGAAAATTTAAGAGAGAGTTTAGAAGGAAGAAGAAGAGGAATTTTACTAGAGTTTTGAGGTTGAAGAAGAGAAGGAGAACTCAGGCAAAGTGTATCCATGGCAGAATATTGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCATGTGCACATTGAGATCGAGTTCCTGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCGTTATCGATTGCTAAGTCGACAGATACAGGTAAAGAAAATCATTGTTGGTCGGCTTCACGCCGTCTTTCGATCTAAGCTAACAGGTAGTCCGGGAGGGGGTGTGATACCTTAG

Protein sequence

MITLELSEPYTRIANRLGQVECVEFLQYQNLCKELFTFGVTKTRPAQFLRPHRKFKREFRRKKKRNFTRVLRLKKRRRTQAKCIHGRILMIYEIFINYMTEILSLRLEITMCTLRSSSWCLIDCLSLLKLRYRLLSRQIQVKKIIVGRLHAVFRSKLTGSPGGGVIP
Homology
[Close]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match: KAA0042092.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK18035.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 6.50e-07
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 54  KFKREFRRKKKRNFTRVLRLKKRRRTQAKCIHG 86
           KF+REF RK KRNFTRVLRLKKRRRTQAKCIHG
Sbjct: 97  KFRREFGRKNKRNFTRVLRLKKRRRTQAKCIHG 129

[Close]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match: KAA0046424.1 (hypothetical protein E6C27_scaffold149G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.72e-06
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 15  NRLGQVECVEFLQYQNLCKELFTFGVTKTRPA 46
           +RLGQVECVE LQYQNLC ELF FG+ KTRPA
Sbjct: 376 SRLGQVECVELLQYQNLCGELFIFGLIKTRPA 407

[Close]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match: KAA0046382.1 (pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 4.16e-06
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 4   LELSEPYTRIANRLGQVECVEFLQYQNLCKELFTFGVTKTR---PAQFLR 50
           L L++P+    ++LGQVECVE  QYQNLC ELFTFG+TKTR   P +F R
Sbjct: 297 LGLAQPFE--FSQLGQVECVELPQYQNLCGELFTFGLTKTRLASPLEFSR 344

[Close]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match: KAA0054856.1 (pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 1.08e-05
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 1   MITLELSEPYTRIA---NRLGQVECVEFLQYQNLCKELFTFGVTKTRPA 46
           + T  L++P        +RLGQVECV   QYQ+LC ELFTFG+TKTRPA
Sbjct: 400 LFTFGLTKPRPAFPIEFSRLGQVECVGLPQYQSLCGELFTFGLTKTRPA 448

[Close]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match: KAA0046375.1 (pyruvate kinase 1, cytosolic [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 1.98e-05
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 15  NRLGQVECVEFLQYQNLCKELFTFGVTKTR---PAQFLR 50
           ++LGQVECVE  QYQNLC ELFTFG+TKTR   P +F R
Sbjct: 394 SQLGQVECVELPQYQNLCGELFTFGLTKTRLASPLEFSR 432

[Close]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TF80 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003570 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.14e-07
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0 

Query: 54  KFKREFRRKKKRNFTRVLRLKKRRRTQAKCIHG 86
           KF+REF RK KRNFTRVLRLKKRRRTQAKCIHG
Sbjct: 97  KFRREFGRKNKRNFTRVLRLKKRRRTQAKCIHG 129

[Close]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001800 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.33e-07
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 15  NRLGQVECVEFLQYQNLCKELFTFGVTKTRPA 46
           +RLGQVECVE LQYQNLC ELF FG+ KTRPA
Sbjct: 376 SRLGQVECVELLQYQNLCGELFIFGLIKTRPA 407

[Close]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TSJ5 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001130 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.02e-06
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 4   LELSEPYTRIANRLGQVECVEFLQYQNLCKELFTFGVTKTR---PAQFLR 50
           L L++P+    ++LGQVECVE  QYQNLC ELFTFG+TKTR   P +F R
Sbjct: 297 LGLAQPFE--FSQLGQVECVELPQYQNLCGELFTFGLTKTRLASPLEFSR 344

[Close]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKP0 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00640 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.21e-06
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 1   MITLELSEPYTRIA---NRLGQVECVEFLQYQNLCKELFTFGVTKTRPA 46
           + T  L++P        +RLGQVECV   QYQ+LC ELFTFG+TKTRPA
Sbjct: 400 LFTFGLTKPRPAFPIEFSRLGQVECVGLPQYQSLCGELFTFGLTKTRPA 448

[Close]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TYA8 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00890 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.56e-06
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 15  NRLGQVECVEFLQYQNLCKELFTFGVTKTR---PAQFLR 50
           ++LGQVECVE  QYQNLC ELFTFG+TKTR   P +F R
Sbjct: 394 SQLGQVECVELPQYQNLCGELFTFGLTKTRLASPLEFSR 432

The following BLAST results are available for this feature:
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042092.16.50e-0790.91putative transmembrane protein [Cucumis melo var. makuwa] >TYK18035.1 putative t... [more]
KAA0046424.11.72e-0681.25hypothetical protein E6C27_scaffold149G001800 [Cucumis melo var. makuwa][more]
KAA0046382.14.16e-0660.00pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa][more]
KAA0054856.11.08e-0557.14pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa][more]
KAA0046375.11.98e-0569.23pyruvate kinase 1, cytosolic [Cucumis melo var. makuwa][more]
BLAST of MELO3C035086.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TF803.14e-0790.91Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7TTN68.33e-0781.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TSJ52.02e-0660.00Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G0011... [more]
A0A5A7UKP05.21e-0657.14Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G0064... [more]
A0A5A7TYA89.56e-0669.23Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G0089... [more]
BLAST of MELO3C035086.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035086.jh1.t1MELO3C035086.jh1.t1mRNA