MELO3C035045 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035045
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr11: 17364141 .. 17365149 (+)
RNA-Seq Expression	MELO3C035045
Synteny	MELO3C035045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAGAGACGTCCAATGAGTGGACTCAGTGGAAGGACAAGCTTGCAGAAGAAATGTTTAGTGACGGGGAGTTGTGTAACCAGTAGAACAATTGAATGTTCACCGTTCATTTTCATACTTAAGTAGTGATTGCATTAGGTCTTATTTTGTCATAGTTTTTGGAATATATTTGTTTTGAATGTATTGATTACGCAAGTAAATTAATGGCAAACTGTTTTTCAGTAAATGTTGAATGTACTATGTATTTGTGTTCTAATCATAGGAAAATTAATGACACTAATATGTTTGCGTTTGATTTCTAGCATGACAAGTACATCGAGACTACCTAAGCACAGTTGGACGAAAGAGGAAGAGGCAAGCCTCATCAAGTTATTAAATGCTGGTGGGTGGAGGTCCAACAATAGGACCTTAACCCCAGGTACCTAAATCAGTTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAACGTCCATGCTTTAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGTGCTTGCGGAGATGCGTGGCTCGACCTGCAGTGTGTTTGGGTGGAACGATGAACAAAAGTGCATTGTCGCAGAGAAAGATGTCTTTGATAATTGGTTTAAGGTGCATTACTAGTCATTTCAACAATTACTGTGGTATATTTAAATAAAGGACTAACCATTTATTGTTGCACTTGTACAGAGTCATCCGATGGCCAAGAGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCATACGTGTTTGGCAAAGATCGTGCGACGGAAGCCCAGGGCGAGACTTTTGTGGATGTTGGATTAAACGATCCTGCTAGGTACGAGGCATTTGCCATTGATGTTGCACCGGATATGGACTTCTAGCCAATGTACAATCAGGGATTGAACATGTCAACTGATGAATCGATGGAAACAAGAACCACTTGGGTAAGTGAGGGTAGGTATGTTTCGAGCGGGTTTAAGCGAAAACGTGGAGGACAGGTCGCA

mRNA sequence

CATAGAGACGTCCAATGAGTGGACTCAGTGGAAGGACAAGCTTGCAGAAGAAATGTTTAGTGACGGGGAGTTGTGTAACCAGTAGAACAATTGAATGTTCACCGTTCATTTTCATACTTAAGTAGTGATTGCATTAGGTCTTATTTTGTCATAGTTTTTGGAATATATTTGTTTTGAATGTATTGATTACGCAAGTAAATTAATGGCAAACTGTTTTTCAGTAAATGTTGAATGTACTATGTATTTGTGTTCTAATCATAGGAAAATTAATGACACTAATATGTTTGCGTTTGATTTCTAGCATGACAAGTACATCGAGACTACCTAAGCACAGTTGGACGAAAGAGGAAGAGGCAAGCCTCATCAAGTTATTAAATGCTGGTGGGTGGAGGTCCAACAATAGGACCTTAACCCCAGGTACCTAAATCAGTTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAACGTCCATGCTTTAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGTGCTTGCGGAGATGCGTGGCTCGACCTGCAGTGTGTTTGGGTGGAACGATGAACAAAAGTGCATTGTCGCAGAGAAAGATGTCTTTGATAATTGGTTTAAGAGTCATCCGATGGCCAAGAGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCATACGTGTTTGGCAAAGATCGTGCGACGGAAGCCCAGGGCGAGACTTTTGTGGATGTTGGATTAAACGATCCTGCTAGGTACGAGGCATTTGCCATTGATGTTGCACCGGATATGGACTTCTAGCCAATGTACAATCAGGGATTGAACATGTCAACTGATGAATCGATGGAAACAAGAACCACTTGGGTAAGTGAGGGTAGGTATGTTTCGAGCGGGTTTAAGCGAAAACGTGGAGGACAGGTCGCA

Coding sequence (CDS)

ATGATGGCCTTCAAGATCCCAGGTTGTAACGTCCATGCTTTAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGTGCTTGCGGAGATGCGTGGCTCGACCTGCAGTGTGTTTGGGTGGAACGATGAACAAAAGTGCATTGTCGCAGAGAAAGATGTCTTTGATAATTGGTTTAAGAGTCATCCGATGGCCAAGAGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCATACGTGTTTGGCAAAGATCGTGCGACGGAAGCCCAGGGCGAGACTTTTGTGGATGTTGGATTAAACGATCCTGCTAGGTACGAGGCATTTGCCATTGATGTTGCACCGGATATGGACTTCTAG

Protein sequence

MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNWFKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDMDF

Homology

[Close]

BLAST of MELO3C035045 vs. NCBI nr
Match: TYK04887.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW
Sbjct: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
           FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM
Sbjct: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120

Query: 121 DF 123
           DF
Sbjct: 121 DF 122

[Close]

BLAST of MELO3C035045 vs. NCBI nr
Match: KAA0062153.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.8 bits (639), Expect = 6.2e-63
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW
Sbjct: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
           FKSHP+AK LLNKSFPHYDELSYVFGKDRATEA+GETFVDVGLNDPA YE FAIDVAPDM
Sbjct: 61  FKSHPVAKGLLNKSFPHYDELSYVFGKDRATEARGETFVDVGLNDPAGYETFAIDVAPDM 120

Query: 121 DF 123
           DF
Sbjct: 121 DF 122

[Close]

BLAST of MELO3C035045 vs. NCBI nr
Match: KAA0047075.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 7.9e-50
Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCN+HA TIDSRIKL+KRMFH LAEMRG  CS FGWNDE+KCIV EK++FD+W
Sbjct: 51  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDW 110

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHPMAK LLNKSF HYDELSYVFGKDRAT  + E+F D+G NDPA Y+AFA D APD 
Sbjct: 111 VKSHPMAKGLLNKSFVHYDELSYVFGKDRATGGRAESFTDIGSNDPAGYDAFAADAAPDT 170

Query: 121 DF 123
           +F
Sbjct: 171 NF 172

[Close]

BLAST of MELO3C035045 vs. NCBI nr
Match: KAA0052248.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01812.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.9 bits (520), Expect = 3.9e-49
Identity = 97/122 (79.51%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHA TIDSRIKLLKRMFH LAEMRG TCS F WNDEQKCIV EK  F++W
Sbjct: 47  MMAFKIPGCNVHASTIDSRIKLLKRMFHTLAEMRGPTCSGFRWNDEQKCIVIEKKEFNDW 106

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHP  K LL K FPHYDELSYVFGKDRA  AQ ETF D+GLNDPARYEAFA + A DM
Sbjct: 107 VKSHPATKGLLTKLFPHYDELSYVFGKDRAMGAQVETFADIGLNDPARYEAFAANAALDM 166

Query: 121 DF 123
           DF
Sbjct: 167 DF 168

[Close]

BLAST of MELO3C035045 vs. NCBI nr
Match: TYK15304.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCN+HA TIDSRIKL+KRMFH LAEMRG TCS FGWNDEQKCIV EK+VFD+W
Sbjct: 51  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDW 110

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHP+AK LLNKSFPHYDE  YVFGKDRAT  + ++F DVG N+P  Y+AF  D  PD 
Sbjct: 111 VKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDT 170

Query: 121 DF 123
           DF
Sbjct: 171 DF 172

[Close]

BLAST of MELO3C035045 vs. ExPASy TrEMBL
Match: A0A5D3BZB7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00800 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.5e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW
Sbjct: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
           FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM
Sbjct: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120

Query: 121 DF 123
           DF
Sbjct: 121 DF 122

[Close]

BLAST of MELO3C035045 vs. ExPASy TrEMBL
Match: A0A5A7V239 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005240 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.0e-63
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW
Sbjct: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
           FKSHP+AK LLNKSFPHYDELSYVFGKDRATEA+GETFVDVGLNDPA YE FAIDVAPDM
Sbjct: 61  FKSHPVAKGLLNKSFPHYDELSYVFGKDRATEARGETFVDVGLNDPAGYETFAIDVAPDM 120

Query: 121 DF 123
           DF
Sbjct: 121 DF 122

[Close]

BLAST of MELO3C035045 vs. ExPASy TrEMBL
Match: A0A5A7U098 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00330 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.8e-50
Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCN+HA TIDSRIKL+KRMFH LAEMRG  CS FGWNDE+KCIV EK++FD+W
Sbjct: 51  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVVEKELFDDW 110

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHPMAK LLNKSF HYDELSYVFGKDRAT  + E+F D+G NDPA Y+AFA D APD 
Sbjct: 111 VKSHPMAKGLLNKSFVHYDELSYVFGKDRATGGRAESFTDIGSNDPAGYDAFAADAAPDT 170

Query: 121 DF 123
           +F
Sbjct: 171 NF 172

[Close]

BLAST of MELO3C035045 vs. ExPASy TrEMBL
Match: A0A5D3BSM9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00470 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.9e-49
Identity = 97/122 (79.51%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCNVHA TIDSRIKLLKRMFH LAEMRG TCS F WNDEQKCIV EK  F++W
Sbjct: 47  MMAFKIPGCNVHASTIDSRIKLLKRMFHTLAEMRGPTCSGFRWNDEQKCIVIEKKEFNDW 106

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHP  K LL K FPHYDELSYVFGKDRA  AQ ETF D+GLNDPARYEAFA + A DM
Sbjct: 107 VKSHPATKGLLTKLFPHYDELSYVFGKDRAMGAQVETFADIGLNDPARYEAFAANAALDM 166

Query: 121 DF 123
           DF
Sbjct: 167 DF 168

[Close]

BLAST of MELO3C035045 vs. ExPASy TrEMBL
Match: A0A5D3CWJ7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00110 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.5e-49
Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 1   MMAFKIPGCNVHALTIDSRIKLLKRMFHVLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNW 60
           MMAFKIPGCN+HA TIDSRIKL+KRMFH LAEMRG TCS FGWNDEQKCIV EK+VFD+W
Sbjct: 51  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDW 110

Query: 61  FKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVDVGLNDPARYEAFAIDVAPDM 120
            KSHP+AK LLNKSFPHYDE  YVFGKDRAT  + ++F DVG N+P  Y+AF  D  PD 
Sbjct: 111 VKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDT 170

Query: 121 DF 123
           DF
Sbjct: 171 DF 172

[Close]

BLAST of MELO3C035045 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-06
Identity = 22/76 (28.95%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 16  IDSRIKLLKRMFH---VLAEMRGSTCSVFGWNDEQKCIVAEKDVFDNWFKSHPMAKSLLN 75
           + +R K L+R+++    L E  G     F W+  +  ++A+ D+++ + ++HP A+S   
Sbjct: 378 LKNRYKHLRRLYNDIKFLLEQNG-----FSWDARRDMVIADDDIWNTYIQAHPEARSYRV 437

Query: 76  KSFPHYDELSYVFGKD 89
           K+ P Y  L ++FGK+
Sbjct: 438 KTIPSYPNLCFIFGKE 448

[Close]

BLAST of MELO3C035045 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 21/62 (33.87%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 41  FGWNDEQKCIVAEKDVFDNWFKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVD 100
           F W+D ++ +VA+  V+D + K HP ++S   KS P Y +L  V+  D  +E + E  + 
Sbjct: 89  FSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESIS 148

Query: 101 VG 103
            G
Sbjct: 149 EG 149

[Close]

BLAST of MELO3C035045 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 21/62 (33.87%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 41  FGWNDEQKCIVAEKDVFDNWFKSHPMAKSLLNKSFPHYDELSYVFGKDRATEAQGETFVD 100
           F W+D ++ +VA+  V+D + K HP ++S   KS P Y +L  V+  D  +E + E  + 
Sbjct: 89  FSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVY-SDGMSEHKAEESIS 148

Query: 101 VG 103
            G
Sbjct: 149 EG 149

[Close]

BLAST of MELO3C035045 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.1e-04
Identity = 16/45 (35.56%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 41  FGWNDEQKCIVAEKDVFDNWFKSHPMAKSLLNKSFPHYDELSYVF 86
           F W++ +  I A+  V+D++ K HP+A++   KS P Y++L  +F
Sbjct: 246 FSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIF 290

The following BLAST results are available for this feature:

BLAST of MELO3C035045 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035045 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04887.1	1.3e-65	100.00	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062153.1	6.2e-63	95.90	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047075.1	7.9e-50	76.23	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0052248.1	3.9e-49	79.51	retrotransposon protein [Cucumis melo var. makuwa] >TYK01812.1 retrotransposon p...	[more]
TYK15304.1	1.1e-48	74.59	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZB7	6.5e-66	100.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V239	3.0e-63	95.90	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U098	3.8e-50	76.23	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BSM9	1.9e-49	79.51	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CWJ7	5.5e-49	74.59	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C035045 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	3.3e-06	28.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	1.1e-04	33.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.1e-04	33.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	3.1e-04	35.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..101
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035045.1	MELO3C035045.1	mRNA