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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAAAGGAATATGCAGAGACGTTCACCGTGAAAGGGGGAGGTATACATATGTTTATGGAAACTTCACAAAATCCAGCGAAATAAACATCTACTTTTCAAAAATGCTCCCAATCGTTCACGTCTTCAATTTCGAGCAAACATTAGTCGTTCATCGTCTTTAATTTCGAGCAAACATTAGGGTTTACCTTCGTCGTCTCCAACAGGACCTTTGCTCCACGCCAGTTGAAAGAAAATCACTACGTCGTGAAGCCATTTTTCATTATGGTTAGTCTATTTTTAAACTTCGTATATCAAATAGAATGGATATATTTGCTGGGATCATATTTCTTTTCAGTCTGGAACCGTCTTTTTCCTAGTATTTTATTAGAAAATGAGATTGAAGAAGCATTTAGGGTTTTTTAACAATATTGATTTCTACTGTGAAATTGATAGATGTAAAATGTTATTTTACTCTTATAACAAAAATGAAGTAATGCATGTTGTATATATTTTGTTTTGAACTTTTTAATCTTAAAATGCTACTTTGAAAAGTGGATGTTGTTTCTATAAAAATCATAATATGGTAAATGGTAGTTTATATTGTATATTAATCTCTATATGTAGTTAAAAAAATTGTGTAGAAGCAAGAGATGCCTAGAATAAAGGATGAAACATATGAAATCGAACAAGGATGATTCAATAATGATTGACGAGACAGAGATATATTTTAAAGTTTCTGAAGTTATATTTGAAATGGTATAAATTGTTAAACAAGATATAATATGTATATATATATCGTAGGATGAAGAAAGATATGAAGAAGCAATTAACTACGAACCATTGCAAATTGTATATCTAGACGATGATGAACAAGAATAAAGAGGAGCTATAGGTACATACAGATTGTGCTGTACTAGGAGAAGAAATATGTGAAACCGGATTTGGTATTTGAAATACCAGAGGCAAAGATGCCAATGCATGACCGAGGTGAACAACCAAAACCAGGTCTAAGAGGAATCATTCTTAGAATCGACCACACAAAAGGCTAG mRNA sequence ATGAAAAAGGAATATGCAGAGACGTTCACCGTGAAAGGGGGAGGGTTTACCTTCGTCGTCTCCAACAGGACCTTTGCTCCACGCCAGTTGAAAGAAAATCACTACGTCGTGAAGCCATTTTTCATTATGGATGAAGAAAGATATGAAGAAGCAATTAACTACGAACCATTGCAAATTGAGAAGAAATATGTGAAACCGGATTTGGTATTTGAAATACCAGAGGCAAAGATGCCAATGCATGACCGAGGTGAACAACCAAAACCAGGTCTAAGAGGAATCATTCTTAGAATCGACCACACAAAAGGCTAG Coding sequence (CDS) ATGAAAAAGGAATATGCAGAGACGTTCACCGTGAAAGGGGGAGGGTTTACCTTCGTCGTCTCCAACAGGACCTTTGCTCCACGCCAGTTGAAAGAAAATCACTACGTCGTGAAGCCATTTTTCATTATGGATGAAGAAAGATATGAAGAAGCAATTAACTACGAACCATTGCAAATTGAGAAGAAATATGTGAAACCGGATTTGGTATTTGAAATACCAGAGGCAAAGATGCCAATGCATGACCGAGGTGAACAACCAAAACCAGGTCTAAGAGGAATCATTCTTAGAATCGACCACACAAAAGGCTAG Protein sequence MKKEYAETFTVKGGGFTFVVSNRTFAPRQLKENHYVVKPFFIMDEERYEEAINYEPLQIEKKYVKPDLVFEIPEAKMPMHDRGEQPKPGLRGIILRIDHTKG
Homology
BLAST of MELO3C034950 vs. NCBI nr
Match: TYK30853.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 36/64 (56.25%), Postives = 38/64 (59.38%), Query Frame = 0
Query: 44 DEERYEEAINYEPLQI----------------------EKKYVKPDLVFEIPEAKMPMHD 86
DEERYEEAINYEPLQ EKKYVKPD+VFE PE KMP HD
Sbjct: 145 DEERYEEAINYEPLQAVYPNDGEHELRGPTGTQIVLYEEKKYVKPDVVFETPETKMPTHD 204
BLAST of MELO3C034950 vs. ExPASy TrEMBL
Match: A0A5D3E406 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00510 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.7e-08 Identity = 36/64 (56.25%), Postives = 38/64 (59.38%), Query Frame = 0
Query: 44 DEERYEEAINYEPLQI----------------------EKKYVKPDLVFEIPEAKMPMHD 86
DEERYEEAINYEPLQ EKKYVKPD+VFE PE KMP HD
Sbjct: 145 DEERYEEAINYEPLQAVYPNDGEHELRGPTGTQIVLYEEKKYVKPDVVFETPETKMPTHD 204
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| TYK30853.1 | 1.4e-07 | 56.25 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5D3E406 | 6.7e-08 | 56.25 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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