MELO3C034868.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034868.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 8668784 .. 8669964 (-)
RNA-Seq ExpressionMELO3C034868.jh1
SyntenyMELO3C034868.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATCCCTCAATTTCCTTCTTCAAAATCCCTCCCCTCATGAACGACGAACGATGCACAACGAAAACCCCAACCTTAACCCCATTCTTCTCATTTCCACATTCTTTCTTCTCGACAACGGAGACCCACGGCGAGGAGACCCATATCGTCACCGGTGAGTTCTTGATCTTTCTTTTTTCGTTTCTTCTCCCTCTATTTATCTCTTCCCCTGTGCACAGTTCCACAAATTACCTTGATAAATTCAAGAGGAAGTAGGGTTCTTAGAGACATATAAAAAGCACCGATTTCTTGTCTTCTTTGCCTCTCCCTTTCTCTATGCATCAATTTGATTTTATAATCTTGATCATCATCCTCCAAAGTTTCAACTAGTGGTTTTCTCCTCCTAGGCATACTCAAATTCTTGACTCCATTGTTCTTATTGTTACTATTATTATCATTATTATTATTATCAGGTTTATTGATGTTTTGGATAAAATTCTTAGGGTTTAGTTTTTGTTGAAAAAGAGAGATAAAGGGGCTGAAAAATTGAGTAGAAAATCTATCACATGTATTTCTATATATAGAAAATCTATCACATATGTTCATCAATGGGACGAAGGTACAAATATGTGGCTTACAATGTGTTTGATTCTTTAAAGCTACCGTAACTCAAAAACATATTTTAACTATTTTGTGATTCTTTAAAGATATATTGATGGTTTTGTGAAATATATTGTTGGCTATGTGATGAAGCATTTTGATAGCTTACAATGTGTTTGATGAAATGCCTCAATGAACCATGTGGTCGATTTTTAATTGATTTTTGTTCATTAGAATTAGGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGCTTCGAGAAAAAGAGAATGAAAAATTAATGGTGAGATTTTAAACTTTGATGATGTGTAGGACCTTAAGCATTTTCTAGAGTTTAGTTGTTAGATTTTAAACAAACACTCTTAAAAATTGATGCCAAGATTCTCAAACAGTAACGAAATTGTGGAGTGACATTAATAGCAGACAAATGCTTAAAGGTTGGTTGGCGGAAATTGTGCACTCTTGTTTTGCATCTATTTGCCCCTGTATATGCACATTGAGAAAGTGAATTGCATTATTGTCTTAGCTATTATAGGTTGGCTGGAGGGTTTGTATTACAATTAAAGTGCTTTAA

mRNA sequence

CAAAATCCCTCAATTTCCTTCTTCAAAATCCCTCCCCTCATGAACGACGAACGATGCACAACGAAAACCCCAACCTTAACCCCATTCTTCTCATTTCCACATTCTTTCTTCTCGACAACGGAGACCCACGGCGAGGAGACCCATATCGTCACCGAATTAGGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGCTTCGAGAAAAAGAGAATGAAAAATTAATGGTTGGCTGGAGGGTTTGTATTACAATTAAAGTGCTTTAA

Coding sequence (CDS)

ATGAACGACGAACGATGCACAACGAAAACCCCAACCTTAACCCCATTCTTCTCATTTCCACATTCTTTCTTCTCGACAACGGAGACCCACGGCGAGGAGACCCATATCGTCACCGAATTAGGAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGCTTCGAGAAAAAGAGAATGAAAAATTAATGGTTGGCTGGAGGGTTTGTATTACAATTAAAGTGCTTTAA

Protein sequence

MNDERCTTKTPTLTPFFSFPHSFFSTTETHGEETHIVTELGNQGQGRFHGYGRKLREKENEKLMVGWRVCITIKVL
Homology
[Close]
BLAST of MELO3C034868.jh1 vs. NCBI nr
Match: KAA0057451.1 (hypothetical protein E6C27_scaffold280G003290 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 5.53e-12
Identity = 36/56 (64.29%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 9  KTPTLTPFFSFPHSFFSTTETHGEETHIVTELGNQGQGRFHGYG---RKLREKENE 61
          KTPTLTPFF  P  FF  TET+GE+TH V    NQGQGRFHGYG    K R K NE
Sbjct: 2  KTPTLTPFFLSPRHFFLVTETYGEKTHSVAR--NQGQGRFHGYGGSFEKKRMKINE 55

[Close]
BLAST of MELO3C034868.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UVB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003290 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.68e-12
Identity = 36/56 (64.29%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 9  KTPTLTPFFSFPHSFFSTTETHGEETHIVTELGNQGQGRFHGYG---RKLREKENE 61
          KTPTLTPFF  P  FF  TET+GE+TH V    NQGQGRFHGYG    K R K NE
Sbjct: 2  KTPTLTPFFLSPRHFFLVTETYGEKTHSVAR--NQGQGRFHGYGGSFEKKRMKINE 55

The following BLAST results are available for this feature:
BLAST of MELO3C034868.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057451.15.53e-1264.29hypothetical protein E6C27_scaffold280G003290 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034868.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034868.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UVB92.68e-1264.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C034868.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034868.jh1.t1MELO3C034868.jh1.t1mRNA