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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGAGGGGTCGGGAAGCAAGCAAGATAATCTAATAACTTCGAAAAAGAGGGGGAGGATTGAACCGCAAAAAGAAGACGTCACTGTACAAAAGAAACAACGGATAAAAAGCTTGGTAAACTACAAATTTATTTTCTAATGAGTTGTGGTCTGTGTAGATTTCAAAAAGTCGAGTTTACAGAAGGAAACTTGAAGAAAAGAAACAAAAAGAGGTTGAAGAAAAAGTATGTGTTTTACATTTTGTTGTACTTCAATTATGTATTATATAAATTGATTATAACTTTGCAAACAGGAAAATACTGAAAGCAAAAGTGAAGAAGAGGAACAAGGAGAAGAAGATGAACAACGAGAAGAAGATGAAAAAGTAGAAGAAGATAATGATGAAGAAGTGGAGGAATAGACAGAGGTAGATGAAGA mRNA sequence ATGGTGGAGGGGTCGGGAAGCAAGCAAGATAATCTAATAACTTCGAAAAAGAGGGGGAGGATTGAACCGCAAAAAGAAGACGTCACTGTACAAAAGAAACAACGGATAAAAAGCTTGGAAAATACTGAAAGCAAAAGTGAAGAAGAGGAACAAGAAGAAGATGAAAAAGTAGAAGAAGATAATGATGAAGAAGTGGAGGAATAGACAGAGGTAGATGAAGA Coding sequence (CDS) ATGGTGGAGGGGTCGGGAAGCAAGCAAGATAATCTAATAACTTCGAAAAAGAGGGGGAGGATTGAACCGCAAAAAGAAGACGTCACTGTACAAAAGAAACAACGGATAAAAAGCTTGGAAAATACTGAAAGCAAAAGTGAAGAAGAGGAACAAGAAGAAGATGAAAAAGTAGAAGAAGATAATGATGAAGAAGTGGAGGAATAG Protein sequence MVEGSGSKQDNLITSKKRGRIEPQKEDVTVQKKQRIKSLENTESKSEEEEQEEDEKVEEDNDEEVEE
Homology
BLAST of MELO3C034861 vs. NCBI nr
Match: TYK02880.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 5.6e-05 Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 1 MVEGSGSKQDNLITSKKRGRIEPQKEDVTVQKKQRIKSLENTESKSEEEEQ-EEDEKVEE 60 M EGSG KQ++ TSKKR R E +KEDV VQKKQRIKSLE+TES+SE+EE+ +EDE+VEE Sbjct: 1 MGEGSGGKQESPGTSKKRVRTETKKEDVNVQKKQRIKSLEDTESESEKEEKVQEDEEVEE 60
Query: 61 DNDEEVEE 68 D +E +E Sbjct: 61 DEQDEDKE 68
BLAST of MELO3C034861 vs. ExPASy TrEMBL
Match: A0A5D3BUT1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00090 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.7e-05 Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 1 MVEGSGSKQDNLITSKKRGRIEPQKEDVTVQKKQRIKSLENTESKSEEEEQ-EEDEKVEE 60 M EGSG KQ++ TSKKR R E +KEDV VQKKQRIKSLE+TES+SE+EE+ +EDE+VEE Sbjct: 1 MGEGSGGKQESPGTSKKRVRTETKKEDVNVQKKQRIKSLEDTESESEKEEKVQEDEEVEE 60
Query: 61 DNDEEVEE 68 D +E +E Sbjct: 61 DEQDEDKE 68
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK02880.1 | 5.6e-05 | 66.18 | protein Ycf2-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BUT1 | 2.7e-05 | 66.18 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 32..67 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..44 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 45..67 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..67 |
Relationships
The following mRNA feature(s) are a part of this gene:
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