MELO3C034834.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034834.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 7857715 .. 7858065 (-)
RNA-Seq ExpressionMELO3C034834.jh1
SyntenyMELO3C034834.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

mRNA sequence

ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

Coding sequence (CDS)

ATGGGTAAGTCGATCCTTCACAGGTTGTTTGTAATCTTGGCTGGGTCAATATACCGTTTCACCCCCGAGATTACATCTTGCTCCTTAAGACCCACTGATCCACTATTGAACAATTGGTTTAAGGTCCAACCTATAAACCAGAATCCTTCTCGAGCCAATGAGAAGGTGGGGCCCCTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTACTATCCCATAAGTGGGTAGGAGTGAATTCCATCTTGCACCCTATGTCCCTAGCTATCCACTCGGTCGTACTCCTGAAATGGGAGGCTTATTGGGCCAGCGATGTTGAGCTACCCTCACTTATACAGATCTAA

Protein sequence

MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI
Homology
[Close]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match: KAA0025730.1 (hypothetical protein E6C27_scaffold653G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (562), Expect = 2.69e-72
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILH+LF+IL GS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHKLFIILVGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLS  WVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +QI
Sbjct: 61  QDLDSVLKGTTYLLSQIWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQI 116

[Close]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match: TYK06160.1 (hypothetical protein E5676_scaffold287G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (559), Expect = 7.72e-72
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILH+LF+IL GS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHKLFIILVGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQ 115
           QDLDSVLKGTTYLLS  WVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +Q
Sbjct: 61  QDLDSVLKGTTYLLSQIWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQ 115

[Close]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match: KAA0048236.1 (hypothetical protein E6C27_scaffold63G001520 [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (555), Expect = 3.25e-71
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGK I+HRLFVI AGS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSR NEKVGPL+
Sbjct: 2   MGKLIIHRLFVIFAGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRTNEKVGPLI 61

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKG TYLLS KWVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +QI
Sbjct: 62  QDLDSVLKGITYLLSQKWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQI 117

[Close]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match: KAA0062650.1 (hypothetical protein E6C27_scaffold79G001670 [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (552), Expect = 9.32e-71
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           M KSILHRLF+ILAGS Y FTPEITSCSLRPTDPLLNNWFKVQPIN NPSRANEKVGPLV
Sbjct: 2   MSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPLV 61

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLSHKWVGVN ILHPMSLAIHSV+ LKWEAYWA+D ELPS +QI
Sbjct: 62  QDLDSVLKGTTYLLSHKWVGVNFILHPMSLAIHSVLSLKWEAYWANDDELPSPMQI 117

[Close]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match: KAA0048214.1 (hypothetical protein E6C27_scaffold63G001280 [Cucumis melo var. makuwa] >TYK08042.1 hypothetical protein E5676_scaffold265G001880 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 1.82e-70
Identity = 105/116 (90.52%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILHRLFVI A SIYRFTPE TSCS RPTDPLLNNWF+VQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHRLFVISAVSIYRFTPETTSCSFRPTDPLLNNWFEVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLS KWVGVNSILHPMSLAIHSV+ LKWEAYWASDVEL S +QI
Sbjct: 61  QDLDSVLKGTTYLLSQKWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELSSSMQI 116

[Close]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SHV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00110 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.30e-72
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILH+LF+IL GS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHKLFIILVGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLS  WVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +QI
Sbjct: 61  QDLDSVLKGTTYLLSQIWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQI 116

[Close]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C4A5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00090 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 3.74e-72
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILH+LF+IL GS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHKLFIILVGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQ 115
           QDLDSVLKGTTYLLS  WVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +Q
Sbjct: 61  QDLDSVLKGTTYLLSQIWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQ 115

[Close]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U1X8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001520 PE=4 SV=1)

HSP 1 Score: 218 bits (555), Expect = 1.57e-71
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGK I+HRLFVI AGS YRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSR NEKVGPL+
Sbjct: 2   MGKLIIHRLFVIFAGSKYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRTNEKVGPLI 61

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKG TYLLS KWVGVNSILHPMSLAIHSV+ LKWEAYWASDVELPS +QI
Sbjct: 62  QDLDSVLKGITYLLSQKWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELPSPMQI 117

[Close]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V5Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001670 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 4.51e-71
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           M KSILHRLF+ILAGS Y FTPEITSCSLRPTDPLLNNWFKVQPIN NPSRANEKVGPLV
Sbjct: 2   MSKSILHRLFIILAGSKYHFTPEITSCSLRPTDPLLNNWFKVQPINLNPSRANEKVGPLV 61

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLSHKWVGVN ILHPMSLAIHSV+ LKWEAYWA+D ELPS +QI
Sbjct: 62  QDLDSVLKGTTYLLSHKWVGVNFILHPMSLAIHSVLSLKWEAYWANDDELPSPMQI 117

[Close]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C9R3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001880 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 8.81e-71
Identity = 105/116 (90.52%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MGKSILHRLFVILAGSIYRFTPEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLV 60
           MGKSILHRLFVI A SIYRFTPE TSCS RPTDPLLNNWF+VQPINQNPSRANEKVGPLV
Sbjct: 1   MGKSILHRLFVISAVSIYRFTPETTSCSFRPTDPLLNNWFEVQPINQNPSRANEKVGPLV 60

Query: 61  QDLDSVLKGTTYLLSHKWVGVNSILHPMSLAIHSVVLLKWEAYWASDVELPSLIQI 116
           QDLDSVLKGTTYLLS KWVGVNSILHPMSLAIHSV+ LKWEAYWASDVEL S +QI
Sbjct: 61  QDLDSVLKGTTYLLSQKWVGVNSILHPMSLAIHSVLPLKWEAYWASDVELSSSMQI 116

The following BLAST results are available for this feature:
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025730.12.69e-7291.38hypothetical protein E6C27_scaffold653G00110 [Cucumis melo var. makuwa][more]
TYK06160.17.72e-7291.30hypothetical protein E5676_scaffold287G00090 [Cucumis melo var. makuwa][more]
KAA0048236.13.25e-7189.66hypothetical protein E6C27_scaffold63G001520 [Cucumis melo var. makuwa][more]
KAA0062650.19.32e-7189.66hypothetical protein E6C27_scaffold79G001670 [Cucumis melo var. makuwa][more]
KAA0048214.11.82e-7090.52hypothetical protein E6C27_scaffold63G001280 [Cucumis melo var. makuwa] >TYK0804... [more]
BLAST of MELO3C034834.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SHV11.30e-7291.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C4A53.74e-7291.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U1X81.57e-7189.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V5Y84.51e-7189.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C9R38.81e-7190.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C034834.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034834.jh1.t1MELO3C034834.jh1.t1mRNA