MELO3C034824 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034824
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Exonuclease mut-7-like protein isoform X3
Location	chr11: 7074553 .. 7076937 (-)
RNA-Seq Expression	MELO3C034824
Synteny	MELO3C034824

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCCTTCTCCCACAATCTTCCGTCTGCCGCGTGGTAATCTGAAAAGCCCTAACTTGTTCGACATCATCTCTTCCGTCTGCGTGGTGTTCATCGTCGCTCGCAAGCCGCTGCCGCCTTTTCTATCTGCGTGTCGTTTCGTCGTTTCCCGTGGTTGCTCGTGTTGATCGTCGCTCATTGCTCATGGTTGAGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTACGGATTGGTTTCCATGTACTCTTTTCACTTCCATCACCTCTGATTAATTATTTCTCTTGTGGGTTGGTTTCCATTATCCTTCTGCCTTTGTGGGTTTTTAATCCCTTTTCTTCTTCTGGCTTCTTCTATAAGATCTTATCTCCACCCTGCTTACAAGTTAAGCCGATCAAATGACCCATTTCCTTGGTTCTTCAAATTGAGAGAGGATTTTTCTTGATTTTCCACAGGTGGGATTGAGAGGGTTTTGGGTTTCTTTTTGTTTTGAAAAAGCTTGTACTATTTTGAACTTCTCCATTTTTGACAGTGTTCTGAAAAAGGGTGATTTTGGGGAGTTTTTTTCTATGTTTGATCCATGGGTACGAATACCCACCAGAGTTTTCAGCAACCCAATTCACCGTTGCTTTGATTTCGCTACGCTCCCAGTTCTTTGTTTGCGGATTTCTCTCATGGGATTGATTCTAAGCGCTTGAATCCTTTCGAGTGCTTTGAATCGGAGCGGTTGGTTTCTAGATATGGGAGTCGCGGTGGCGGTTGTAATAGTAATGATTCGAAATCTCCGGTAGTCGAAAACTACTTTTCTGGTCTGCTGTTGCATTATCCTCGGCTGAGCTCCGTCGTTAACTGTTCTTCTTCTTCTTCCTCCTCTTCTTCCTCTTCTTGTTCTTCTTCATCCTCCTCAATGTGTAGCTCACTTGGTTTTTTGGGTTCTAATCTTGTTCGTCAGAGTAGCTGGGGTTCTCTCTCAATTCAATGAAAATGGTGAATGATTCATTACTCATATTTTGAAGATTTTTAAGCAATACATATACTTTATTACAAGCAAAATGTATTACCTATTGAACCTGAATTCTGGGCTTTTGACAAATAGTTTTTAAAGTTCAAAGTCTTCATATCTTTACGAAACTTTTATGTGTTTTAAGGTTTACTTGGCATTGGAAGCTGGCTATTTCGAAAAAGTTGATGAATTTTGCAATAGGTACTCCCTTAGGGTTTTCTGAATATCAAAGGTATGACGTCTGTACCATAGTCTCTTGCACTTAGAAGCTTCATTGCATATGTCGGGCCGTTTTTCCAGCTTTAACAAGATCAATATCTCATGTTAGACTATTATTATTCAGAAGTATTTCTACGAACTATCTTGTTGGCCTTTATCCATTCCCTATTACCCTTAGTCATTCCTTTTTACCTTTTGTTCTTTATTGCCCCAAGTTTGTCCACTTTATTTGTTTTTTAATTGAATAAATATAGGCATCTTGCAGAAAATTTTACAAGTATAAAATAAAGAGTTAAAAGGCGCTGCAAGAAAACAAAGAACCGGTTGAATGCCTCTAGGAATTGCTTCCATGGGCATTAAGAAGTGGAGTTGCTGGATCTAGTGAATAAACCACAAAAATCCTTATCATAATTCCTAGGTGATTAAAGCTTTTGTTAGGACACTGATCATGTTCTTTTATTCCTCAAAAAAATTTAAACTGGCTTTAGAATAAGGAAAATAAGGTACTTGCTGACCAAAAAAGGTAAAACGTAACCTAGTGAGCTACACAATTTTACCATAGGCATTAAGAAGGGCCTTTTCCTTCTCACGTTGATCACCCAATGAAGGAAGGTAGAGTACTTATCACCCTTAGTGAGCTACTCAATTTTACCTGTGTCTCGACAAAGAGAAAATTAGTGTAAGTGTAAAATTAATATCATTTAACCTAAACTTATTTATTATATTTTTAGCTTATTGACACATTATTGTTTTAAAAACTTAGGAACAAAAATTATATTTGATCTGCCTAATTTTCTAGGCAGTCATCAATTCGGTTGTAAATTATCTTTGAGTAACTTAGGATGGTTTCTACTACTAGGAACAAATCTTGGTTTCTGTACATTATATGACTTCAGTGTTCTTGAACATTATCTACATAAAAAATTAGCATGCTTCGAATCACTGCAGTTAAATTTTATTTGCATTGCACAAAATTTTACTTGTTCTGATTCATATTAGTTAACCTAATCAACATATTGGTTTTCTGTAGAACGTGAGGGAAGTTATGGACAAAAGTTATCGAACCACTATCTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAAA

mRNA sequence

TTCTCCTTCTCCCACAATCTTCCGTCTGCCGCGTGGTAATCTGAAAAGCCCTAACTTGTTCGACATCATCTCTTCCGTCTGCGTGGTGTTCATCGTCGCTCGCAAGCCGCTGCCGCCTTTTCTATCTGCGTGTCGTTTCGTCGTTTCCCGTGGTTGCTCGTGTTGATCGTCGCTCATTGCTCATGGTTGAGCGTTCTGTTCGTGGTCGCTCGCAAGCAGAACGTGAGGGAAGTTATGGACAAAAGTTATCGAACCACTATCTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAAA

Coding sequence (CDS)

ATGGTTGAGCGTTCTGTTCGTGGTCGCTCGCAAGCAGAACGTGAGGGAAGTTATGGACAAAAGTTATCGAACCACTATCTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGATGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAAA

Protein sequence

MVERSVRGRSQAEREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK

Homology

[Close]

BLAST of MELO3C034824 vs. NCBI nr
Match: KAA0050943.1 (exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1 exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREGSYGQKL+NHYLNLNQLIAGDILWVDNADALHHATRHIEECK
Sbjct: 293 EREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 337

[Close]

BLAST of MELO3C034824 vs. NCBI nr
Match: XP_008450552.1 (PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREGSYGQKL+NHYLNLNQLIAGDILWVDNADALHHATRHIEECK
Sbjct: 335 EREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 379

[Close]

BLAST of MELO3C034824 vs. NCBI nr
Match: TYK01099.1 (exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 4.6e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEEC 57
           ER+GSYGQKL NHYLNLNQLIAGDILWVDNADALHHATRHIEEC
Sbjct: 184 ERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEEC 227

[Close]

BLAST of MELO3C034824 vs. NCBI nr
Match: XP_038880060.1 (uncharacterized protein LOC120071757 isoform X1 [Benincasa hispida] >XP_038880061.1 uncharacterized protein LOC120071757 isoform X1 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREG YGQK  NHYLNLNQLI GDILWVDNADAL HAT H+EECK
Sbjct: 378 EREGGYGQKSQNHYLNLNQLIVGDILWVDNADALRHATCHLEECK 422

[Close]

BLAST of MELO3C034824 vs. NCBI nr
Match: XP_038880062.1 (uncharacterized protein LOC120071757 isoform X2 [Benincasa hispida])

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREG YGQK  NHYLNLNQLI GDILWVDNADAL HAT H+EECK
Sbjct: 335 EREGGYGQKSQNHYLNLNQLIVGDILWVDNADALRHATCHLEECK 379

[Close]

BLAST of MELO3C034824 vs. ExPASy TrEMBL
Match: A0A1S3BPE9 (uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREGSYGQKL+NHYLNLNQLIAGDILWVDNADALHHATRHIEECK
Sbjct: 335 EREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 379

[Close]

BLAST of MELO3C034824 vs. ExPASy TrEMBL
Match: A0A5D3CG08 (Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004410 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREGSYGQKL+NHYLNLNQLIAGDILWVDNADALHHATRHIEECK
Sbjct: 293 EREGSYGQKLTNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 337

[Close]

BLAST of MELO3C034824 vs. ExPASy TrEMBL
Match: A0A5D3BSN1 (Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001260 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEEC 57
           ER+GSYGQKL NHYLNLNQLIAGDILWVDNADALHHATRHIEEC
Sbjct: 184 ERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEEC 227

[Close]

BLAST of MELO3C034824 vs. ExPASy TrEMBL
Match: A0A0A0LWB0 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G561980 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREGSY QKL NHYL+LNQLI G+ILW+DNADALH AT HIEECK
Sbjct: 335 EREGSYEQKLPNHYLDLNQLIDGNILWIDNADALHRATCHIEECK 379

[Close]

BLAST of MELO3C034824 vs. ExPASy TrEMBL
Match: A0A6J1HXY3 (uncharacterized protein LOC111467860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467860 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 13  EREGSYGQKLSNHYLNLNQLIAGDILWVDNADALHHATRHIEECK 58
           EREG+YGQ   NHYLNLNQLI GDILWVDNADALH+A  HIEECK
Sbjct: 335 EREGAYGQ---NHYLNLNQLITGDILWVDNADALHNAICHIEECK 376

The following BLAST results are available for this feature:

BLAST of MELO3C034824 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050943.1	2.4e-17	97.78	exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1...	[more]
XP_008450552.1	2.4e-17	97.78	PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 P...	[more]
TYK01099.1	4.6e-16	95.45	exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa]	[more]
XP_038880060.1	1.6e-13	84.44	uncharacterized protein LOC120071757 isoform X1 [Benincasa hispida] >XP_03888006...	[more]
XP_038880062.1	1.6e-13	84.44	uncharacterized protein LOC120071757 isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C034824 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPE9	1.2e-17	97.78	uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=...	[more]
A0A5D3CG08	1.2e-17	97.78	Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3BSN1	2.2e-16	95.45	Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LWB0	1.1e-12	82.22	3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1HXY3	1.3e-11	82.22	uncharacterized protein LOC111467860 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C034824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034824.1	MELO3C034824.1	mRNA