MELO3C034810 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034810
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histidine-rich glycoprotein-like
Location	chr10: 14884046 .. 14884289 (+)
RNA-Seq Expression	MELO3C034810
Synteny	MELO3C034810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACATGGCAACAGGGAAAGAGTCGAAGACGGAGGCAGAGAGAGAATCGGAGAGGGCGGTGGCAGGGAGAGAGTCGGACGAACGAATGAAATGGGAAGGATTTGGTACGCATTTTTTGAGAGGTGGAACACGGCGGTGAACGCGGACTGATGGATGGTGAACACGGCACAAGTGAGGGATCTAGTGTAACTTACAATTTCGAAAGGGCAGAGACACATTTAGGGCTTTGAAAAAGTTAAC

mRNA sequence

ATGGAGACATGGCAACAGGGAAAGAGTCGAAGACGGAGGCAGAGAGAGAATCGGAGAGGGCGGTGGCAGGGAGAGAGTCGGACGAACGAATGAAATGGGAAGGATTTGGTACGCATTTTTTGAGAGGTGGAACACGGCGGTGAACGCGGACTGATGGATGGTGAACACGGCACAAGTGAGGGATCTAGTGTAACTTACAATTTCGAAAGGGCAGAGACACATTTAGGGCTTTGAAAAAGTTAAC

Coding sequence (CDS)

ATGGCAACAGGGAAAGAGTCGAAGACGGAGGCAGAGAGAGAATCGGAGAGGGCGGTGGCAGGGAGAGAGTCGGACGAACGAATGAAATGGGAAGGATTTGGTACGCATTTTTTGAGAGGTGGAACACGGCGGTGA

Protein sequence

MATGKESKTEAERESERAVAGRESDERMKWEGFGTHFLRGGTRR

Homology

[Close]

BLAST of MELO3C034810 vs. NCBI nr
Match: KAA0067176.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1  MATGKESKTEAERESERAVAGRESDERMKWEGF 34
          MATGKESKTEAERESERAVAGRESDERMKWEGF
Sbjct: 1  MATGKESKTEAERESERAVAGRESDERMKWEGF 33

[Close]

BLAST of MELO3C034810 vs. ExPASy TrEMBL
Match: A0A5A7VL48 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002540 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1  MATGKESKTEAERESERAVAGRESDERMKWEGF 34
          MATGKESKTEAERESERAVAGRESDERMKWEGF
Sbjct: 1  MATGKESKTEAERESERAVAGRESDERMKWEGF 33

The following BLAST results are available for this feature:

BLAST of MELO3C034810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067176.1	3.9e-07	100.00	histidine-rich glycoprotein-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VL48	1.9e-07	100.00	Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of MELO3C034810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034810.1	MELO3C034810.1	mRNA