MELO3C034807.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034807.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionEGF-like domain-containing protein
Locationchr01: 3814319 .. 3816650 (-)
RNA-Seq ExpressionMELO3C034807.jh1
SyntenyMELO3C034807.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAAGGTGGAAAAAGTTATTAACAACACATTATTTGGATCTTTTCTTTCGTGCCCATCAGGTAATCAGCAAGACTTTTTCCCCTTCCTCATTTTTCTCATTGATTAGTTTTGAGACACAAATCTTGTTGGCTTAGGTTGTGGAGGATGGATATGAATTATTTGCCGAGAGACAACTTGTCACAATATTTTCGTCCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCATTAATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAATTGCATAATGGATTTTGTATCGGGTTTTCTATGGTAAACTTATTATCTTATTTCTTCTTGTTCTGGTAACTTACTAAGGTACTTGATACTGTATATTGTATTGCTACACTATTTTATTAGCATCGTTGAATTGGCATAAAACTCTAGAGAAAATATTTGTAACCTAAGGGTTCGATACCCCCACCCCACACATTATCCAAATGAACCATGGTTTCTTGTTTAAAATAGAGAAGTTCAAATCTTTTGATAAAAAAAATGTTATTTGCAGGCCAAGCATTTTCTCATGAAAAACTCTGAGAAGAATTGTAGTATGTGTGCGTAGTACTCGAAACCCAATAGCATAGTTTTCTGGGATTGAGACTATTTAAAATTGAATCAACAAATGAATAATTTTTGTAATGGAGTCAAACTCAAGCACATAGAATGATATAGCACTACATTTCCAATGAAATCTTTTAAACTGCAGGCCTGTTTGTGTATGAAATATTGAAAATTGCTTGAACTTTACTTCCTAATAGTGGCTAGGAACGGACACTGACTAAGATTTTCATGTTGTAGCTAGATTTCCATCTAAGAAACCTTAGAGTTTTTTTTTTATTTTTATTATTATTGATCACCGACGATATGTATTTTCCTACTTTTGATTTTCTCACTTGAATTCTTGACTTTGAGAGATTATTTAATGTATAGTTGGTATTTATGGTTGTCACTTTCATGATGGTTTCCAAACGGTTCGATGTGTGAGGGAGAAGATCTAATGTTGGATTAACTATGCATCTAACCGTTATAAGAGTGTATACTGTGCACTTTCGTTGCTTGGATTTGATTTCATTTCTGTCTTTAATTGTTGATGGAATTTGACTTGCTCGAGAAAGGCGGCGTCTGGAGTATAGACTGTTTATATATGTCCTTGCATGATGTGAAATTAATTGCACATTAATCCGGCAGATTTTTAATTGGCTCAATTAGTCTTACAACCGCTACTTCAGCATCGCTGTTTTTCTGGTTTTGTAATTATTTGTTAGTTGTATGGAAACGGTTCAAGTATTATCAAATATTTGGATTCGCGACATTTTAATCATTGTATCTGATCTGGTTTTTTCTTGATTGTTTTGTAGGAGGCTGCTATGCTATTAATTGTCTTTCTTTCATAGATCTGTAGAGTTTGTAACTACATTTTCTTAGAACTACATTGTTTAGGGAAATAAATTAACTAAGGATAGTTGAGATTTTAAGATAACAAGATCTGTTGTGCTCGTGGCCAGATTCATGCGTGTTTTTTAAATTGTATTATTCCTTCCTAATGATGATATTTTCCTTGATTTTTGGCAGATGGCTTCAGTGATTGCTGCAAATCTTTTAACAAGCATAAAACTCATAGATTTGTTATGCGTTGTAGTGACGTGGGTGTTTTCTATTATAAAACTTTATGCTAGATTTGCAAGTATGTTATCAGTCATTACAATTGCAATCTCTCTTTGTATCTCGGTTTTCTTACTATATGCAATGTTTTCAGGACATCACAAAAGCAAGAAAGATACCGAAGCGTGCTTTGCCTATTATTTGCTTCAGAGAAGTCAGCCCCTCATTGTCGGATGCTTCAAACACTTCCATTATAGATTCAGGTTCTTTGACTTAGCTATAACTTAAAGCAAGCTTCATTTTGTTGTTCTAGTCTGCTATCTTAGCCTTGTGTTTGACTTTGAGCATTTTATCTCTAAGATGTATATTTAGTAACATGTTCTAAAGTTGTTTTTCTTTCCTCGAAATAAAAGAAAGTAACGTAAATAGGCTTAAATCTCATTTTTCTGAAAAACATATTTGGGAATAGAAAGAAAACTGCTAACCACTTTAAATTACACTAACCATTTGAGGCTATGATTTTTATTTTAAGTGGCTTTTAGAAGTTATCTCCTGCAACAGGGTTAGCTCCTTTGACCAACGTTTCAATTGAGGGAATCCAAGGTCATCAAAATCTGGAGCTATGCTATCCAATGCAGAGAA

mRNA sequence

GATAAGGTGGAAAAAGTTGTGGAGGATGGATATGAATTATTTGCCGAGAGACAACTTGTCACAATATTTTCGTCCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCATTAATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACTTGTATGGAAACGGTTCAAGTATTATCAAATATTTGGATTCGCGACATTTTAATCATTGTATCTGATCTGATGGCTTCAGTGATTGCTGCAAATCTTTTAACAAGCATAAAACTCATAGATTTGTTATGCGTTGTAGTGACGTGGGACATCACAAAAGCAAGAAAGATACCGAAGCGTGCTTTGCCTATTATTTGCTTCAGAGAAGTCAGCCCCTCATTGTCGGATGCTTCAAACACTTCCATTATAGATTCAGGTTCTTTGAAGTTATCTCCTGCAACAGGGTTAGCTCCTTTGACCAACGTTTCAATTGAGGGAATCCAAGGTCATCAAAATCTGGAGCTATGCTATCCAATGCAGAGAA

Coding sequence (CDS)

ATGAGTGTTGATGAAGAATTGATGTGCTCTCTCCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACTTGTATGGAAACGGTTCAAGTATTATCAAATATTTGGATTCGCGACATTTTAATCATTGTATCTGATCTGATGGCTTCAGTGATTGCTGCAAATCTTTTAACAAGCATAAAACTCATAGATTTGTTATGCGTTGTAGTGACGTGGGACATCACAAAAGCAAGAAAGATACCGAAGCGTGCTTTGCCTATTATTTGCTTCAGAGAAGTCAGCCCCTCATTGTCGGATGCTTCAAACACTTCCATTATAGATTCAGGTTCTTTGAAGTTATCTCCTGCAACAGGGTTAGCTCCTTTGACCAACGTTTCAATTGAGGGAATCCAAGGTCATCAAAATCTGGAGCTATGCTATCCAATGCAGAGA

Protein sequence

MSVDEELMCSLQILKPVDENGNKVMVPTRTCMETVQVLSNIWIRDILIIVSDLMASVIAANLLTSIKLIDLLCVVVTWDITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQGHQNLELCYPMQR
Homology
[Close]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match: TYK23762.1 (vacuolar fusion protein CCZ1-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (291), Expect = 1.09e-28
Identity = 61/72 (84.72%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICF+EVSP LSDASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 83  DITKARKIPKRALPIICFKEVSPPLSDASNTSIIDSG---------LAPLTNVSIEGIQG 142

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 143 HQNLELCYPMQR 145

[Close]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match: KAA0052791.1 (14-3-3-like protein GF14 kappa [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 3.09e-28
Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 70  DLLCVVVTWDITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLT 129
           D  C +   DITKARKIPKRALPIICFREVSP LSDASNTSIIDSG         LAPLT
Sbjct: 361 DKACSMAKEDITKARKIPKRALPIICFREVSPPLSDASNTSIIDSG---------LAPLT 420

Query: 130 NVSIEGIQGHQNLELCYPMQR 150
           NVSIEGIQGHQNLELCYPMQR
Sbjct: 421 NVSIEGIQGHQNLELCYPMQR 432

[Close]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match: KAA0058860.1 (MACPF domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (294), Expect = 9.63e-28
Identity = 62/72 (86.11%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFREVSP LSDASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 295 DITKARKIPKRALPIICFREVSPPLSDASNTSIIDSG---------LAPLTNVSIEGIQG 354

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 355 HQNLELCYPMQR 357

[Close]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match: XP_008458195.1 (PREDICTED: uncharacterized protein LOC103497700 isoform X3 [Cucumis melo])

HSP 1 Score: 113 bits (282), Expect = 9.99e-26
Identity = 60/72 (83.33%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFRE SP L DASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 34  DITKARKIPKRALPIICFREGSPPLPDASNTSIIDSG---------LAPLTNVSIEGIQG 93

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 94  HQNLELCYPMQR 96

[Close]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match: XP_016902279.1 (PREDICTED: uncharacterized protein LOC103497700 isoform X1 [Cucumis melo])

HSP 1 Score: 113 bits (282), Expect = 1.01e-25
Identity = 60/72 (83.33%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFRE SP L DASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 82  DITKARKIPKRALPIICFREGSPPLPDASNTSIIDSG---------LAPLTNVSIEGIQG 141

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 142 HQNLELCYPMQR 144

[Close]
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DJM4 (Vacuolar fusion protein CCZ1-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00830 PE=4 SV=1)

HSP 1 Score: 116 bits (291), Expect = 5.29e-29
Identity = 61/72 (84.72%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICF+EVSP LSDASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 83  DITKARKIPKRALPIICFKEVSPPLSDASNTSIIDSG---------LAPLTNVSIEGIQG 142

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 143 HQNLELCYPMQR 145

[Close]
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UGY8 (14-3-3-like protein GF14 kappa OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00030 PE=3 SV=1)

HSP 1 Score: 119 bits (297), Expect = 1.50e-28
Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 70  DLLCVVVTWDITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLT 129
           D  C +   DITKARKIPKRALPIICFREVSP LSDASNTSIIDSG         LAPLT
Sbjct: 361 DKACSMAKEDITKARKIPKRALPIICFREVSPPLSDASNTSIIDSG---------LAPLT 420

Query: 130 NVSIEGIQGHQNLELCYPMQR 150
           NVSIEGIQGHQNLELCYPMQR
Sbjct: 421 NVSIEGIQGHQNLELCYPMQR 432

[Close]
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UUX6 (MACPF domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00210 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 4.66e-28
Identity = 62/72 (86.11%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFREVSP LSDASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 295 DITKARKIPKRALPIICFREVSPPLSDASNTSIIDSG---------LAPLTNVSIEGIQG 354

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 355 HQNLELCYPMQR 357

[Close]
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C8J4 (uncharacterized protein LOC103497700 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497700 PE=3 SV=1)

HSP 1 Score: 113 bits (282), Expect = 4.83e-26
Identity = 60/72 (83.33%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFRE SP L DASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 34  DITKARKIPKRALPIICFREGSPPLPDASNTSIIDSG---------LAPLTNVSIEGIQG 93

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 94  HQNLELCYPMQR 96

[Close]
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C7W7 (uncharacterized protein LOC103497700 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497700 PE=3 SV=1)

HSP 1 Score: 113 bits (282), Expect = 4.88e-26
Identity = 60/72 (83.33%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 79  DITKARKIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQG 138
           DITKARKIPKRALPIICFRE SP L DASNTSIIDSG         LAPLTNVSIEGIQG
Sbjct: 82  DITKARKIPKRALPIICFREGSPPLPDASNTSIIDSG---------LAPLTNVSIEGIQG 141

Query: 139 HQNLELCYPMQR 150
           HQNLELCYPMQR
Sbjct: 142 HQNLELCYPMQR 144

[Close]
BLAST of MELO3C034807.jh1 vs. TAIR 10
Match: AT2G46060.1 (transmembrane protein-related )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 25/66 (37.88%), Postives = 32/66 (48.48%), Query Frame = 0 

Query: 85  KIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQGHQNLEL 144
           KI K  LP+ICFR+ SP L DAS  ++             L    N S E  Q  +  + 
Sbjct: 84  KISKSLLPVICFRDGSPPLPDASTNAL---------QGLELGRFFNGSFERAQDSEIAQQ 140

Query: 145 CYPMQR 151
           CYPMQ+
Sbjct: 144 CYPMQK 140

[Close]
BLAST of MELO3C034807.jh1 vs. TAIR 10
Match: AT2G46060.2 (transmembrane protein-related )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 25/66 (37.88%), Postives = 32/66 (48.48%), Query Frame = 0 

Query: 85  KIPKRALPIICFREVSPSLSDASNTSIIDSGSLKLSPATGLAPLTNVSIEGIQGHQNLEL 144
           KI K  LP+ICFR+ SP L DAS  ++             L    N S E  Q  +  + 
Sbjct: 84  KISKSLLPVICFRDGSPPLPDASTNAL---------QGLELGRFFNGSFERAQDSEIAQQ 140

Query: 145 CYPMQR 151
           CYPMQ+
Sbjct: 144 CYPMQK 140

The following BLAST results are available for this feature:
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23762.11.09e-2884.72vacuolar fusion protein CCZ1-like protein isoform X2 [Cucumis melo var. makuwa][more]
KAA0052791.13.09e-2879.0114-3-3-like protein GF14 kappa [Cucumis melo var. makuwa][more]
KAA0058860.19.63e-2886.11MACPF domain-containing protein [Cucumis melo var. makuwa][more]
XP_008458195.19.99e-2683.33PREDICTED: uncharacterized protein LOC103497700 isoform X3 [Cucumis melo][more]
XP_016902279.11.01e-2583.33PREDICTED: uncharacterized protein LOC103497700 isoform X1 [Cucumis melo][more]
BLAST of MELO3C034807.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034807.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DJM45.29e-2984.72Vacuolar fusion protein CCZ1-like protein isoform X2 OS=Cucumis melo var. makuwa... [more]
A0A5A7UGY81.50e-2879.0114-3-3-like protein GF14 kappa OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7UUX64.66e-2886.11MACPF domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3C8J44.83e-2683.33uncharacterized protein LOC103497700 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3C7W74.88e-2683.33uncharacterized protein LOC103497700 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of MELO3C034807.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G46060.13.0e-0437.88transmembrane protein-related [more]
AT2G46060.23.0e-0437.88transmembrane protein-related [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034807.jh1.t1MELO3C034807.jh1.t1mRNA