MELO3C034792.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034792.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPlant transposase
Locationchr11: 18670859 .. 18671699 (+)
RNA-Seq ExpressionMELO3C034792.jh1
SyntenyMELO3C034792.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTCTGAAATATTGTGTTTATATATTGTTGTTTGCTAGGAGCGCATTGAACAAACTGAGGTTGAGACGACAATTTCAACAACAAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCTCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGAGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATTACAAGTATAAGGTTCTTAAAAAAGAATATTTGAAGGTGAAGGAAGAAATGATAGAAATGAAAGCAATGAAAGACGAAATGATAGGAATAAAAGCACTTGTGTCATCTTATTTAAAGAAACATGTTTTTTTTTCTTTTATTAACTTAGATTTTTTTTCTGTTAGTAGTTAACTATATTTTTTATTTCTGTTAGTAGTTAACTATATTTTTTTATTTCATATGAGATTATCATAGGTTGAACCAAGTGAGGAACTTTCAAATACTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAACTTGTCCAATGTTTTCTCCATTAGTAAATTTATTTGTAATATGATGAAAATTGTTTATGATGCCATTATTGTCTTATTCTAGTATCTCATATTTGACTTTTGACAGAGTATCAATAACAATAGTCAAATTAGGTGCAAGTTATTTGATTGGTATGACTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCAAAGAAACCGAACGCATTTTGTGGAGGCCAACATAAAAAATGACATGTACTTAAGAAGTTTCGGGATATACAGTTGCATGA

mRNA sequence

TGCTCTGAAATATTGTGTTTATATATTGTTGTTTGCTAGGAGCGCATTGAACAAACTGAGGTTGAGACGACAATTTCAACAACAAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCTCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGAGTGACTCGTTCAAAACTATCTCTTTTGTCTCAACAAGATTACAAGTATAAGGTTCTTAAAAAAGAATATTTGAAGGTGAAGGAAGAAATGAGTATCAATAACAATAGTCAAATTAGGTGCAAGTTATTTGATTGGTATGACTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCAAAGAAACCGAACGCATTTTGTGGAGGCCAACATAAAAAATGACATGTACTTAAGAAGTTTCGGGATATACAGTTGCATGA

Coding sequence (CDS)

ATGAGTATCAATAACAATAGTCAAATTAGGTGCAAGTTATTTGATTGGTATGACTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCAAAGAAACCGAACGCATTTTGTGGAGGCCAACATAAAAAATGA

Protein sequence

MSINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAFCGGQHKK
Homology
[Close]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match: KAA0048394.1 (uncharacterized protein E6C27_scaffold264G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 1.85e-31
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2  SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
          SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 6  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 64

[Close]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match: TYJ95916.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (295), Expect = 2.89e-31
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1   MSINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           ++INNNSQ +CKL DWY SGEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+AKKPNA+
Sbjct: 121 LNINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAY 180

[Close]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match: TYK20615.1 (uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 6.86e-31
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2   SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 57  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 115

[Close]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match: TYJ98014.1 (uncharacterized protein E5676_scaffold487G00400 [Cucumis melo var. makuwa] >TYK05396.1 uncharacterized protein E5676_scaffold83G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 8.14e-31
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2   SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 57  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 115

[Close]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match: TYK13515.1 (uncharacterized protein E5676_scaffold745G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 1.43e-30
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 2  SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
          SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVWVD+AKKPN +
Sbjct: 40 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWVDVAKKPNTY 98

[Close]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TZC7 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001140 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 8.98e-32
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2  SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
          SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 6  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 64

[Close]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BAJ3 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002260 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 1.40e-31
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1   MSINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           ++INNNSQ +CKL DWY SGEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+AKKPNA+
Sbjct: 121 LNINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAY 180

[Close]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DAM7 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00420 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 3.32e-31
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2   SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 57  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 115

[Close]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BG15 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00400 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 3.94e-31
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 2   SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
           SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVW+D+AKKPNA+
Sbjct: 57  SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAY 115

[Close]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CPP9 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold745G00110 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 6.92e-31
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0 

Query: 2  SINNNSQIRCKLFDWYDSGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIAKKPNAF 60
          SINNNSQ +CKL DWY SGEIVAEGRWSSNDPT +VHH+ IGPHAIRVWVD+AKKPN +
Sbjct: 40 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWVDVAKKPNTY 98

The following BLAST results are available for this feature:
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048394.11.85e-3181.36uncharacterized protein E6C27_scaffold264G001140 [Cucumis melo var. makuwa][more]
TYJ95916.12.89e-3185.00Plant transposase [Cucumis melo var. makuwa][more]
TYK20615.16.86e-3181.36uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa][more]
TYJ98014.18.14e-3181.36uncharacterized protein E5676_scaffold487G00400 [Cucumis melo var. makuwa] >TYK0... [more]
TYK13515.11.43e-3081.36uncharacterized protein E5676_scaffold745G00110 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034792.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZC78.98e-3281.36Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3BAJ31.40e-3185.00Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00... [more]
A0A5D3DAM73.32e-3181.36Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3BG153.94e-3181.36Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3CPP96.92e-3181.36Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of MELO3C034792.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034792.jh1.t1MELO3C034792.jh1.t1mRNA