MELO3C034714.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C034714.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	ADP-ribosylation factor
Location	chr11: 13146739 .. 13146906 (+)
RNA-Seq Expression	MELO3C034714.jh1
Synteny	MELO3C034714.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTGACCTTCACCAAGCTTTTCAGTAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACAATGGGTGCGTTCTTTGATTACTAA

mRNA sequence

ATGAGATTGACCTTCACCAAGCTTTTCAGTAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACAATGGGTGCGTTCTTTGATTACTAA

Coding sequence (CDS)

ATGAGATTGACCTTCACCAAGCTTTTCAGTAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACAATGGGTGCGTTCTTTGATTACTAA

Protein sequence

MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY

Homology

[Close]

BLAST of MELO3C034714.jh1 vs. NCBI nr
Match: KAA0036532.1 (ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK13450.1 ADP-ribosylation factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (253), Expect = 4.95e-27
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLF+RLFAKKEMQILMVGLDAAGKTTILYKLKLGEI+TTIPTMG FFDY
Sbjct: 1  MGLTFTKLFTRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIITTIPTMGVFFDY 55

[Close]

BLAST of MELO3C034714.jh1 vs. NCBI nr
Match: KAA0053266.1 (ADP-ribosylation factor A1B [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 1.64e-25
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG   +Y
Sbjct: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGGVGEY 55

[Close]

BLAST of MELO3C034714.jh1 vs. NCBI nr
Match: KAE9614447.1 (putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase [Lupinus albus])

HSP 1 Score: 95.9 bits (237), Expect = 1.60e-24
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G FF +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFFHF 55

[Close]

BLAST of MELO3C034714.jh1 vs. NCBI nr
Match: RYQ89430.1 (hypothetical protein Ahy_B09g096084 isoform E [Arachis hypogaea])

HSP 1 Score: 93.6 bits (231), Expect = 1.91e-23
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G F  +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGMFLPF 55

[Close]

BLAST of MELO3C034714.jh1 vs. NCBI nr
Match: KAE9597983.1 (putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase [Lupinus albus])

HSP 1 Score: 93.6 bits (231), Expect = 2.12e-23
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G F  +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFLHF 55

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-18
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-18
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot
Match: P49076 (ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-18
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot
Match: P51822 (ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-17
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+FTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot
Match: O48920 (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-17
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+FTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CPT1 (ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold179G00030 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 2.40e-27
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLF+RLFAKKEMQILMVGLDAAGKTTILYKLKLGEI+TTIPTMG FFDY
Sbjct: 1  MGLTFTKLFTRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIITTIPTMGVFFDY 55

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UGB9 (ADP-ribosylation factor A1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00610 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.93e-26
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG   +Y
Sbjct: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGGVGEY 55

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL
Match: A0A6A4QLW6 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Lupinus albus OX=3870 GN=Lalb_Chr05g0228261 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.73e-25
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G FF +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFFHF 55

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL
Match: A0A2P2LC40 (Putative adp-ribosylation factor 2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.40e-24
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFF 53
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G FF
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFF 53

[Close]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL
Match: A0A444XIG2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g096084 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.22e-24
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMGAFFDY 55
          M LTFTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G F  +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGMFLPF 55

[Close]

BLAST of MELO3C034714.jh1 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-18
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L FTKLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 87.4 bits (215), Expect = 3.8e-18
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+F KLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 87.4 bits (215), Expect = 3.8e-18
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+F KLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F )

HSP 1 Score: 87.4 bits (215), Expect = 3.8e-18
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+F KLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]

BLAST of MELO3C034714.jh1 vs. TAIR 10
Match: AT1G70490.3 (Ras-related small GTP-binding family protein )

HSP 1 Score: 87.4 bits (215), Expect = 3.8e-18
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MRLTFTKLFSRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVTTIPTMG 51
          M L+F KLFSRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIVTTIPT+G
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

The following BLAST results are available for this feature:

BLAST of MELO3C034714.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036532.1	4.95e-27	92.73	ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK13450.1 ADP-ribosylatio...	[more]
KAA0053266.1	1.64e-25	92.73	ADP-ribosylation factor A1B [Cucumis melo var. makuwa]	[more]
KAE9614447.1	1.60e-24	89.09	putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr...	[more]
RYQ89430.1	1.91e-23	87.27	hypothetical protein Ahy_B09g096084 isoform E [Arachis hypogaea]	[more]
KAE9597983.1	2.12e-23	87.27	putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr...	[more]

BLAST of MELO3C034714.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06396	4.9e-18	94.00	ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g08134...	[more]
P51823	4.9e-18	94.00	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 S...	[more]
P49076	4.9e-18	94.00	ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2	[more]
P51822	1.4e-17	92.00	ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2	[more]
O48920	1.4e-17	92.00	ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3	[more]

BLAST of MELO3C034714.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPT1	2.40e-27	92.73	ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7UGB9	7.93e-26	92.73	ADP-ribosylation factor A1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6A4QLW6	7.73e-25	89.09	Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr...	[more]
A0A2P2LC40	3.40e-24	92.45	Putative adp-ribosylation factor 2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
A0A444XIG2	9.22e-24	87.27	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g096084 PE=4 SV=1	[more]

BLAST of MELO3C034714.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14670.1	1.3e-18	92.00	ADP-ribosylation factor A1B	[more]
AT1G70490.1	3.8e-18	90.00	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	3.8e-18	90.00	ADP-ribosylation factor 1	[more]
AT1G10630.1	3.8e-18	90.00	ADP-ribosylation factor A1F	[more]
AT1G70490.3	3.8e-18	90.00	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..54 e-value: 4.9E-16 score: 60.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..53
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 5..51 e-value: 7.0E-16 score: 58.2
None	No IPR available	PANTHER	PTHR11711:SF377	ADP RIBOSYLATION FACTOR	coord: 1..51
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034714.jh1.t1	MELO3C034714.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding